RNA–Protein interactions for RNA: ENST00000344404.10

TRIOBP-202, Transcript of TRIO and F-actin binding protein, humanhuman

TSL 2

Gene TRIOBP, Length 7,300 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-202ENST00000344404 RC3H1Q5TC82 1133 aaKnown RBP13.11□□□□□ -0.31
TRIOBP-202ENST00000344404 CATSPER3Q86XQ3 398 aa13.11□□□□□ -0.31
TRIOBP-202ENST00000344404 TUBB2BQ9BVA1 445 aa13.11□□□□□ -0.31
TRIOBP-202ENST00000344404 LCP1P13796 627 aa13.11□□□□□ -0.31
TRIOBP-202ENST00000344404 HSPA6P17066 643 aa13.11□□□□□ -0.31
TRIOBP-202ENST00000344404 ZNF568Q3ZCX4 644 aa13.11□□□□□ -0.31
TRIOBP-202ENST00000344404 RPAP3Q9H6T3 665 aaPredicted RBP13.11□□□□□ -0.31
TRIOBP-202ENST00000344404 SMYD3Q9H7B4 428 aa13.11□□□□□ -0.31
TRIOBP-202ENST00000344404 STRIP2Q9ULQ0 834 aa13.11□□□□□ -0.31
TRIOBP-202ENST00000344404 NDUFB5O43674 189 aa13.11□□□□□ -0.31
TRIOBP-202ENST00000344404 NPM3O75607 178 aaKnown RBP13.11□□□□□ -0.31
TRIOBP-202ENST00000344404 MT-ND3P03897 115 aa13.11□□□□□ -0.31
TRIOBP-202ENST00000344404 ATP5JP18859 108 aa13.11□□□□□ -0.31
TRIOBP-202ENST00000344404 LONP1P36776 959 aaKnown RBP13.11□□□□□ -0.31
TRIOBP-202ENST00000344404 WASHC5Q12768 1159 aa13.11□□□□□ -0.31
TRIOBP-202ENST00000344404 KANSL2Q9H9L4 492 aa13.11□□□□□ -0.31
TRIOBP-202ENST00000344404 TMCC1O94876 653 aa13.11□□□□□ -0.31
TRIOBP-202ENST00000344404 BPIFB4P59827 614 aa13.11□□□□□ -0.31
TRIOBP-202ENST00000344404 ERICH1Q86X53 443 aa13.11□□□□□ -0.31
TRIOBP-202ENST00000344404 IGFLR1Q9H665 355 aa13.11□□□□□ -0.31
TRIOBP-202ENST00000344404 KIAA1468Q9P260 1216 aa13.11□□□□□ -0.31
TRIOBP-202ENST00000344404 L3MBTL1Q9Y468 752 aa13.11□□□□□ -0.31
TRIOBP-202ENST00000344404 PRRG1O14668 218 aa13.1□□□□□ -0.31
TRIOBP-202ENST00000344404 SCRN1Q12765 414 aa13.1□□□□□ -0.31
TRIOBP-202ENST00000344404 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.1□□□□□ -0.31
TRIOBP-202ENST00000344404 EFHD1Q9BUP0 239 aa13.1□□□□□ -0.31
TRIOBP-202ENST00000344404 CAPS2Q9BXY5 557 aa13.1□□□□□ -0.31
TRIOBP-202ENST00000344404 SP110Q9HB58 689 aa13.1□□□□□ -0.31
TRIOBP-202ENST00000344404 CACNA2D2Q9NY47 1150 aa13.1□□□□□ -0.31
TRIOBP-202ENST00000344404 EFCAB14O75071 495 aa13.1□□□□□ -0.31
TRIOBP-202ENST00000344404 DEFB132Q7Z7B7 95 aa13.1□□□□□ -0.31
TRIOBP-202ENST00000344404 SAMD9Q5K651 1589 aa13.1□□□□□ -0.31
TRIOBP-202ENST00000344404 TADA2AO75478 443 aa13.1□□□□□ -0.31
TRIOBP-202ENST00000344404 IL6STP40189 918 aaPredicted RBP13.1□□□□□ -0.31
TRIOBP-202ENST00000344404 NLRP10Q86W26 655 aa13.1□□□□□ -0.31
TRIOBP-202ENST00000344404 NAF1Q96HR8 494 aaKnown RBP13.1□□□□□ -0.31
TRIOBP-202ENST00000344404 EPB41L5Q9HCM4 733 aa13.1□□□□□ -0.31
TRIOBP-202ENST00000344404 INTS9Q9NV88 658 aaKnown RBP13.1□□□□□ -0.31
TRIOBP-202ENST00000344404 ABCC4O15439 1325 aa13.1□□□□□ -0.31
TRIOBP-202ENST00000344404 PAMP19021 973 aa13.1□□□□□ -0.31
TRIOBP-202ENST00000344404 SOX11P35716 441 aa13.1□□□□□ -0.31
TRIOBP-202ENST00000344404 MTMR2Q13614 643 aa13.1□□□□□ -0.31
TRIOBP-202ENST00000344404 HEMGNQ9BXL5 484 aa13.1□□□□□ -0.31
TRIOBP-202ENST00000344404 CHCHD3Q9NX63 227 aaKnown RBP13.1□□□□□ -0.31
TRIOBP-202ENST00000344404 HOXC10Q9NYD6 342 aa13.1□□□□□ -0.31
TRIOBP-202ENST00000344404 RGL1Q9NZL6 768 aa13.1□□□□□ -0.31
TRIOBP-202ENST00000344404 TTI1O43156 1089 aa13.1□□□□□ -0.31
TRIOBP-202ENST00000344404 CASP14P31944 242 aa13.1□□□□□ -0.31
TRIOBP-202ENST00000344404 HMGCS2P54868 508 aa13.1□□□□□ -0.31
TRIOBP-202ENST00000344404 E2F5Q15329 346 aa13.1□□□□□ -0.31
TRIOBP-202ENST00000344404 TTC23LQ6PF05 361 aa13.09□□□□□ -0.31
TRIOBP-202ENST00000344404 CHMP1BQ7LBR1 199 aa13.09□□□□□ -0.31
TRIOBP-202ENST00000344404 RRM2BQ7LG56 351 aa13.09□□□□□ -0.31
TRIOBP-202ENST00000344404 GOLGA8KD6RF30 607 aa13.09□□□□□ -0.31
TRIOBP-202ENST00000344404 H0YC42 278 aa13.09□□□□□ -0.31
TRIOBP-202ENST00000344404 HUS1O60921 280 aa13.09□□□□□ -0.31
TRIOBP-202ENST00000344404 ANGPT1Q15389 498 aa13.09□□□□□ -0.31
TRIOBP-202ENST00000344404 PRR23CQ6ZRP0 262 aa13.09□□□□□ -0.31
TRIOBP-202ENST00000344404 TRPV6Q9H1D0 765 aa13.09□□□□□ -0.31
TRIOBP-202ENST00000344404 ZFYVE28Q9HCC9 887 aa13.09□□□□□ -0.31
TRIOBP-202ENST00000344404 CCDC159P0C7I6 412 aa13.09□□□□□ -0.31
TRIOBP-202ENST00000344404 COPB1P53618 953 aaKnown RBP13.09□□□□□ -0.31
TRIOBP-202ENST00000344404 SWSAP1Q6NVH7 229 aa13.09□□□□□ -0.31
TRIOBP-202ENST00000344404 PARVGQ9HBI0 331 aa13.09□□□□□ -0.31
TRIOBP-202ENST00000344404 SELENONQ9NZV5 590 aa13.09□□□□□ -0.31
TRIOBP-202ENST00000344404 PPP2R2CQ9Y2T4 447 aa13.09□□□□□ -0.31
TRIOBP-202ENST00000344404 ZC3H4Q9UPT8 1303 aaKnown RBP13.09□□□□□ -0.31
TRIOBP-202ENST00000344404 ARHGEF37A1IGU5 675 aa13.09□□□□□ -0.31
TRIOBP-202ENST00000344404 USP17L5A8MUK1 530 aa13.09□□□□□ -0.31
TRIOBP-202ENST00000344404 HSPA8P11142 646 aaKnown RBP13.09□□□□□ -0.31
TRIOBP-202ENST00000344404 KPNA2P52292 529 aaKnown RBP13.09□□□□□ -0.31
TRIOBP-202ENST00000344404 TXNRD1Q16881 649 aa13.09□□□□□ -0.31
TRIOBP-202ENST00000344404 BBOF1Q8ND07 529 aa13.09□□□□□ -0.31
TRIOBP-202ENST00000344404 NRBF2Q96F24 287 aa13.09□□□□□ -0.31
TRIOBP-202ENST00000344404 CFAP43Q8NDM7 1665 aa13.09□□□□□ -0.31
TRIOBP-202ENST00000344404 PEG3Q9GZU2 1588 aa13.09□□□□□ -0.31
TRIOBP-202ENST00000344404 ACSL3O95573 720 aa13.09□□□□□ -0.31
TRIOBP-202ENST00000344404 SP100P23497 879 aaPredicted RBP13.09□□□□□ -0.31
TRIOBP-202ENST00000344404 GPATCH4Q5T3I0 446 aaKnown RBP13.09□□□□□ -0.31
TRIOBP-202ENST00000344404 KHDRBS2Q5VWX1 349 aaKnown RBP13.09□□□□□ -0.31
TRIOBP-202ENST00000344404 C1orf131Q8NDD1 294 aaKnown RBP13.09□□□□□ -0.31
TRIOBP-202ENST00000344404 TMEM2Q9UHN6 1383 aa13.08□□□□□ -0.31
TRIOBP-202ENST00000344404 HSPA4LO95757 839 aa13.08□□□□□ -0.31
TRIOBP-202ENST00000344404 RBL2Q08999 1139 aa13.08□□□□□ -0.31
TRIOBP-202ENST00000344404 ANKRD40Q6AI12 368 aa13.08□□□□□ -0.31
TRIOBP-202ENST00000344404 PPP1R14AQ96A00 147 aa13.08□□□□□ -0.31
TRIOBP-202ENST00000344404 ZNF212Q9UDV6 495 aa13.08□□□□□ -0.31
TRIOBP-202ENST00000344404 CCDC78A2IDD5 438 aa13.08□□□□□ -0.32
TRIOBP-202ENST00000344404 FOSP01100 380 aaPredicted RBP13.08□□□□□ -0.32
TRIOBP-202ENST00000344404 SEPT2Q15019 361 aa13.08□□□□□ -0.32
TRIOBP-202ENST00000344404 TRIML1Q8N9V2 468 aa13.08□□□□□ -0.32
TRIOBP-202ENST00000344404 PCSK1NQ9UHG2 260 aa13.08□□□□□ -0.32
TRIOBP-202ENST00000344404 BICRAQ9NZM4 1560 aa13.08□□□□□ -0.32
TRIOBP-202ENST00000344404 SPTLC1O15269 473 aa13.08□□□□□ -0.32
TRIOBP-202ENST00000344404 PLA2G4BP0C869 781 aa13.08□□□□□ -0.32
TRIOBP-202ENST00000344404 LRRC74AQ0VAA2 488 aa13.08□□□□□ -0.32
TRIOBP-202ENST00000344404 SCARF1Q14162 830 aa13.08□□□□□ -0.32
TRIOBP-202ENST00000344404 TTLL4Q14679 1199 aa13.08□□□□□ -0.32
TRIOBP-202ENST00000344404 ANGEL2Q5VTE6 544 aaKnown RBP13.08□□□□□ -0.32
TRIOBP-202ENST00000344404 MCTP2Q6DN12 878 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms