RNA–Protein interactions for RNA: ENST00000343805.10

SP140-201, Transcript of SP140 nuclear body protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP140, Length 2,910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-201ENST00000343805 WHAMMQ8TF30 809 aa9.51□□□□□ -0.89
SP140-201ENST00000343805 NLRP3Q96P20 1036 aa9.51□□□□□ -0.89
SP140-201ENST00000343805 GSDMAQ96QA5 445 aa9.51□□□□□ -0.89
SP140-201ENST00000343805 SLC39A3Q9BRY0 314 aa9.51□□□□□ -0.89
SP140-201ENST00000343805 TMEM60Q9H2L4 133 aa9.51□□□□□ -0.89
SP140-201ENST00000343805 PLEKHA4Q9H4M7 779 aa9.51□□□□□ -0.89
SP140-201ENST00000343805 SLC40A1Q9NP59 571 aa9.51□□□□□ -0.89
SP140-201ENST00000343805 WDR35Q9P2L0 1181 aa9.51□□□□□ -0.89
SP140-201ENST00000343805 CIDEBQ9UHD4 219 aa9.51□□□□□ -0.89
SP140-201ENST00000343805 RAB21Q9UL25 225 aa9.51□□□□□ -0.89
SP140-201ENST00000343805 LRP6O75581 1613 aa9.51□□□□□ -0.89
SP140-201ENST00000343805 PAPPAQ13219 1627 aa9.51□□□□□ -0.89
SP140-201ENST00000343805 ECM29Q5VYK3 1845 aa9.51□□□□□ -0.89
SP140-201ENST00000343805 GPR75-ASB3A0A0A6YYF3 556 aa9.51□□□□□ -0.89
SP140-201ENST00000343805 KCNJ18B7U540 433 aa9.51□□□□□ -0.89
SP140-201ENST00000343805 MFAP3LO75121 409 aa9.51□□□□□ -0.89
SP140-201ENST00000343805 CHMP4BP1P59074 171 aa9.51□□□□□ -0.89
SP140-201ENST00000343805 ATP2C1P98194 919 aaPredicted RBP9.51□□□□□ -0.89
SP140-201ENST00000343805 PAK1Q13153 545 aa9.51□□□□□ -0.89
SP140-201ENST00000343805 KCNJ12Q14500 433 aa9.51□□□□□ -0.89
SP140-201ENST00000343805 GRIK5Q16478 980 aa9.51□□□□□ -0.89
SP140-201ENST00000343805 TBCELQ5QJ74 424 aa9.51□□□□□ -0.89
SP140-201ENST00000343805 CRELD2Q6UXH1 353 aaPredicted RBP9.51□□□□□ -0.89
SP140-201ENST00000343805 MAPKAPK5Q8IW41 473 aa9.51□□□□□ -0.89
SP140-201ENST00000343805 PNMA1Q8ND90 353 aa9.51□□□□□ -0.89
SP140-201ENST00000343805 TGFBRAP1Q8WUH2 860 aa9.51□□□□□ -0.89
SP140-201ENST00000343805 HPS3Q969F9 1004 aa9.51□□□□□ -0.89
SP140-201ENST00000343805 CAPS2Q9BXY5 557 aa9.51□□□□□ -0.89
SP140-201ENST00000343805 RSPH9Q9H1X1 276 aaPredicted RBP9.51□□□□□ -0.89
SP140-201ENST00000343805 VIPAS39Q9H9C1 493 aa9.51□□□□□ -0.89
SP140-201ENST00000343805 MYO1AQ9UBC5 1043 aa9.51□□□□□ -0.89
SP140-201ENST00000343805 ASB3Q9Y575 518 aa9.51□□□□□ -0.89
SP140-201ENST00000343805 SLC30A1Q9Y6M5 507 aa9.51□□□□□ -0.89
SP140-201ENST00000343805 MYH13Q9UKX3 1938 aa9.5□□□□□ -0.89
SP140-201ENST00000343805 BOLA2-SMG1P6H3BVE0 249 aa9.5□□□□□ -0.89
SP140-201ENST00000343805 PHACTR2O75167 634 aa9.5□□□□□ -0.89
SP140-201ENST00000343805 PRPF6O94906 941 aaKnown RBP9.5□□□□□ -0.89
SP140-201ENST00000343805 NPTXRO95502 500 aa9.5□□□□□ -0.89
SP140-201ENST00000343805 UBA7P41226 1012 aa9.5□□□□□ -0.89
SP140-201ENST00000343805 COPB1P53618 953 aaKnown RBP9.5□□□□□ -0.89
SP140-201ENST00000343805 PMS1P54277 932 aaKnown RBP9.5□□□□□ -0.89
SP140-201ENST00000343805 ERVK-24P63145 666 aa9.5□□□□□ -0.89
SP140-201ENST00000343805 ARID5AQ03989 594 aa9.5□□□□□ -0.89
SP140-201ENST00000343805 CBX3Q13185 183 aa9.5□□□□□ -0.89
SP140-201ENST00000343805 C21orf62-AS1Q17RA5 79 aa9.5□□□□□ -0.89
SP140-201ENST00000343805 GNPTABQ3T906 1256 aa9.5□□□□□ -0.89
SP140-201ENST00000343805 HOOK3Q86VS8 718 aa9.5□□□□□ -0.89
SP140-201ENST00000343805 FCHSD1Q86WN1 690 aa9.5□□□□□ -0.89
SP140-201ENST00000343805 JAMLQ86YT9 394 aa9.5□□□□□ -0.89
SP140-201ENST00000343805 GDAP1L1Q96MZ0 367 aa9.5□□□□□ -0.89
SP140-201ENST00000343805 BRIP1Q9BX63 1249 aa9.5□□□□□ -0.89
SP140-201ENST00000343805 SLC7A5P2Q9GIP4 190 aa9.5□□□□□ -0.89
SP140-201ENST00000343805 GBP3Q9H0R5 595 aa9.5□□□□□ -0.89
SP140-201ENST00000343805 GALNT8Q9NY28 637 aa9.5□□□□□ -0.89
SP140-201ENST00000343805 ZMAT5Q9UDW3 170 aaKnown RBP9.5□□□□□ -0.89
SP140-201ENST00000343805 A0A1B0GVG6 124 aa9.5□□□□□ -0.89
SP140-201ENST00000343805 TMEM110-MUSTN1A8MSY1 372 aa9.5□□□□□ -0.89
SP140-201ENST00000343805 RPN1P04843 607 aaKnown RBP9.5□□□□□ -0.89
SP140-201ENST00000343805 TGFB3P10600 412 aa9.5□□□□□ -0.89
SP140-201ENST00000343805 TXLNAP40222 546 aa9.5□□□□□ -0.89
SP140-201ENST00000343805 CNGA3Q16281 694 aa9.5□□□□□ -0.89
SP140-201ENST00000343805 THOC7Q6I9Y2 204 aaKnown RBP9.5□□□□□ -0.89
SP140-201ENST00000343805 NCAPH2Q6IBW4 605 aa9.5□□□□□ -0.89
SP140-201ENST00000343805 RNF19BQ6ZMZ0 732 aa9.5□□□□□ -0.89
SP140-201ENST00000343805 SH3RF1Q7Z6J0 888 aa9.5□□□□□ -0.89
SP140-201ENST00000343805 BLIDQ8IZY5 108 aa9.5□□□□□ -0.89
SP140-201ENST00000343805 SLC7A5P1Q8MH63 180 aa9.5□□□□□ -0.89
SP140-201ENST00000343805 GOLGA1Q92805 767 aa9.5□□□□□ -0.89
SP140-201ENST00000343805 RPAP3Q9H6T3 665 aaPredicted RBP9.5□□□□□ -0.89
SP140-201ENST00000343805 ZNHIT6Q9NWK9 470 aaKnown RBP9.5□□□□□ -0.89
SP140-201ENST00000343805 MYH14Q7Z406 1995 aaKnown RBP9.5□□□□□ -0.89
SP140-201ENST00000343805 ZNF804BA4D1E1 1349 aa9.5□□□□□ -0.89
SP140-201ENST00000343805 MYH8P13535 1937 aa9.5□□□□□ -0.89
SP140-201ENST00000343805 DDX60Q8IY21 1712 aaKnown RBP9.49□□□□□ -0.89
SP140-201ENST00000343805 S100BP04271 92 aaPredicted RBP9.49□□□□□ -0.89
SP140-201ENST00000343805 TSPY3P0CV98 308 aa9.49□□□□□ -0.89
SP140-201ENST00000343805 TSPY8P0CW00 308 aa9.49□□□□□ -0.89
SP140-201ENST00000343805 CALM1P0DP23 149 aa9.49□□□□□ -0.89
SP140-201ENST00000343805 CALM2P0DP24 149 aa9.49□□□□□ -0.89
SP140-201ENST00000343805 CALM3P0DP25 149 aa9.49□□□□□ -0.89
SP140-201ENST00000343805 ATP4AP20648 1035 aa9.49□□□□□ -0.89
SP140-201ENST00000343805 DNAJB2P25686 324 aa9.49□□□□□ -0.89
SP140-201ENST00000343805 CSE1LP55060 971 aaKnown RBP9.49□□□□□ -0.89
SP140-201ENST00000343805 PPP4CP60510 307 aa9.49□□□□□ -0.89
SP140-201ENST00000343805 SKIDA1Q1XH10 827 aa9.49□□□□□ -0.89
SP140-201ENST00000343805 LETM2Q2VYF4 491 aa9.49□□□□□ -0.89
SP140-201ENST00000343805 CDKAL1Q5VV42 579 aa9.49□□□□□ -0.89
SP140-201ENST00000343805 SH3RF3Q8TEJ3 882 aaPredicted RBP9.49□□□□□ -0.89
SP140-201ENST00000343805 TNFRSF25Q93038 417 aa9.49□□□□□ -0.89
SP140-201ENST00000343805 CAPZA3Q96KX2 299 aa9.49□□□□□ -0.89
SP140-201ENST00000343805 TRIM47Q96LD4 638 aa9.49□□□□□ -0.89
SP140-201ENST00000343805 CTAGE1Q96RT6 745 aa9.49□□□□□ -0.89
SP140-201ENST00000343805 UBE2OQ9C0C9 1292 aaKnown RBP9.49□□□□□ -0.89
SP140-201ENST00000343805 IL17RBQ9NRM6 502 aa9.49□□□□□ -0.89
SP140-201ENST00000343805 SEL1LQ9UBV2 794 aa9.49□□□□□ -0.89
SP140-201ENST00000343805 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.49□□□□□ -0.89
SP140-201ENST00000343805 TRIM64CA6NLI5 447 aa9.49□□□□□ -0.89
SP140-201ENST00000343805 PPP1R12BO60237 982 aaPredicted RBP9.49□□□□□ -0.89
SP140-201ENST00000343805 KDM1AO60341 852 aa9.49□□□□□ -0.89
SP140-201ENST00000343805 TOM1O60784 492 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms