RNA–Protein interactions for RNA: ENST00000343115.8

RDX-201, Transcript of radixin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RDX, Length 4,491 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-201ENST00000343115 SETDB1Q15047 1291 aa17.7■□□□□ 0.42
RDX-201ENST00000343115 CCDC6Q16204 474 aa17.7■□□□□ 0.42
RDX-201ENST00000343115 TACO1Q9BSH4 297 aaKnown RBP17.7■□□□□ 0.42
RDX-201ENST00000343115 EDEM3Q9BZQ6 932 aa17.7■□□□□ 0.42
RDX-201ENST00000343115 FBXL5Q9UKA1 691 aa17.7■□□□□ 0.42
RDX-201ENST00000343115 PASKQ96RG2 1323 aa17.7■□□□□ 0.42
RDX-201ENST00000343115 PRELPP51888 382 aa17.7■□□□□ 0.42
RDX-201ENST00000343115 POLGP54098 1239 aaPredicted RBP17.7■□□□□ 0.42
RDX-201ENST00000343115 PAF1Q8N7H5 531 aa17.7■□□□□ 0.42
RDX-201ENST00000343115 MTMR8Q96EF0 704 aa17.7■□□□□ 0.42
RDX-201ENST00000343115 HEMGNQ9BXL5 484 aa17.7■□□□□ 0.42
RDX-201ENST00000343115 TAF1DQ9H5J8 278 aaPredicted RBP17.7■□□□□ 0.42
RDX-201ENST00000343115 RAVER2Q9HCJ3 691 aaKnown RBP17.7■□□□□ 0.42
RDX-201ENST00000343115 HOMER3Q9NSC5 361 aa17.7■□□□□ 0.42
RDX-201ENST00000343115 PARP2Q9UGN5 583 aa17.7■□□□□ 0.42
RDX-201ENST00000343115 NOP56O00567 594 aaKnown RBP17.7■□□□□ 0.42
RDX-201ENST00000343115 SEMA3FQ13275 785 aa17.7■□□□□ 0.42
RDX-201ENST00000343115 MTERF2Q49AM1 385 aa17.7■□□□□ 0.42
RDX-201ENST00000343115 SRLQ86TD4 932 aa17.7■□□□□ 0.42
RDX-201ENST00000343115 MCF2L2Q86YR7 1114 aa17.7■□□□□ 0.42
RDX-201ENST00000343115 RCCD1A6NED2 376 aa17.69■□□□□ 0.42
RDX-201ENST00000343115 POC1B-GALNT4F8VUJ3 575 aa17.69■□□□□ 0.42
RDX-201ENST00000343115 TTI1O43156 1089 aa17.69■□□□□ 0.42
RDX-201ENST00000343115 ADRA2BP18089 450 aa17.69■□□□□ 0.42
RDX-201ENST00000343115 EEPD1Q7L9B9 569 aa17.69■□□□□ 0.42
RDX-201ENST00000343115 NEK9Q8TD19 979 aa17.69■□□□□ 0.42
RDX-201ENST00000343115 PNMA5Q96PV4 448 aa17.69■□□□□ 0.42
RDX-201ENST00000343115 KCND1Q9NSA2 647 aa17.69■□□□□ 0.42
RDX-201ENST00000343115 SERPINA10Q9UK55 444 aa17.69■□□□□ 0.42
RDX-201ENST00000343115 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.69■□□□□ 0.42
RDX-201ENST00000343115 CCDC188H7C350 402 aa17.69■□□□□ 0.42
RDX-201ENST00000343115 EPHB6O15197 1021 aa17.69■□□□□ 0.42
RDX-201ENST00000343115 RAD51CO43502 376 aa17.69■□□□□ 0.42
RDX-201ENST00000343115 EVI5O60447 810 aa17.69■□□□□ 0.42
RDX-201ENST00000343115 ZIM3Q96PE6 472 aa17.69■□□□□ 0.42
RDX-201ENST00000343115 PAGR1Q9BTK6 254 aa17.69■□□□□ 0.42
RDX-201ENST00000343115 EMSYQ7Z589 1322 aa17.69■□□□□ 0.42
RDX-201ENST00000343115 ESYT2A0FGR8 921 aa17.69■□□□□ 0.42
RDX-201ENST00000343115 ZBTB7AO95365 584 aa17.69■□□□□ 0.42
RDX-201ENST00000343115 ATP5DP30049 168 aa17.69■□□□□ 0.42
RDX-201ENST00000343115 PSMC6P62333 389 aa17.69■□□□□ 0.42
RDX-201ENST00000343115 TRIM51Q9BSJ1 452 aa17.69■□□□□ 0.42
RDX-201ENST00000343115 CELF4Q9BZC1 486 aaKnown RBP17.69■□□□□ 0.42
RDX-201ENST00000343115 DKC1O60832 514 aaKnown RBP eCLIP17.68■□□□□ 0.422e-7■■■□□ 15.9
RDX-201ENST00000343115 SSTR3P32745 418 aaPredicted RBP17.68■□□□□ 0.42
RDX-201ENST00000343115 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.68■□□□□ 0.42
RDX-201ENST00000343115 BLOC1S4Q9NUP1 217 aa17.68■□□□□ 0.42
RDX-201ENST00000343115 NEBLO76041 1014 aa17.68■□□□□ 0.42
RDX-201ENST00000343115 MXRA7P84157 204 aa17.68■□□□□ 0.42
RDX-201ENST00000343115 CUL1Q13616 776 aa17.68■□□□□ 0.42
RDX-201ENST00000343115 NAA25Q14CX7 972 aa17.68■□□□□ 0.42
RDX-201ENST00000343115 E2F5Q15329 346 aa17.68■□□□□ 0.42
RDX-201ENST00000343115 RPUSD2Q8IZ73 545 aaKnown RBP17.68■□□□□ 0.42
RDX-201ENST00000343115 ANKS1AQ92625 1134 aa17.68■□□□□ 0.42
RDX-201ENST00000343115 INTS2Q9H0H0 1204 aaKnown RBP17.68■□□□□ 0.42
RDX-201ENST00000343115 TMEM206Q9H813 350 aa17.68■□□□□ 0.42
RDX-201ENST00000343115 FEZ2Q9UHY8 353 aaPredicted RBP17.68■□□□□ 0.42
RDX-201ENST00000343115 ZBTB12Q9Y330 459 aaPredicted RBP17.68■□□□□ 0.42
RDX-201ENST00000343115 PCDHB4Q9Y5E5 795 aa17.68■□□□□ 0.42
RDX-201ENST00000343115 PDXKO00764 312 aa17.68■□□□□ 0.42
RDX-201ENST00000343115 ATF2P15336 505 aa17.68■□□□□ 0.42
RDX-201ENST00000343115 SEC24CP53992 1094 aa17.68■□□□□ 0.42
RDX-201ENST00000343115 PAPD7Q5XG87 772 aaKnown RBP17.68■□□□□ 0.42
RDX-201ENST00000343115 ANKRD35Q8N283 1001 aa17.68■□□□□ 0.42
RDX-201ENST00000343115 XXYLT1Q8NBI6 393 aa17.68■□□□□ 0.42
RDX-201ENST00000343115 CYP2W1Q8TAV3 490 aa17.68■□□□□ 0.42
RDX-201ENST00000343115 SPATA20Q8TB22 786 aa17.68■□□□□ 0.42
RDX-201ENST00000343115 MAK16Q9BXY0 300 aaKnown RBP17.68■□□□□ 0.42
RDX-201ENST00000343115 HMGB1P1B2RPK0 211 aaPredicted RBP17.68■□□□□ 0.42
RDX-201ENST00000343115 PDE2AO00408 941 aaPredicted RBP17.68■□□□□ 0.42
RDX-201ENST00000343115 PIK3CAP42336 1068 aa17.68■□□□□ 0.42
RDX-201ENST00000343115 ZRSR2Q15696 482 aaKnown RBP17.68■□□□□ 0.42
RDX-201ENST00000343115 CEP55Q53EZ4 464 aa17.68■□□□□ 0.42
RDX-201ENST00000343115 WDR59Q6PJI9 974 aa17.68■□□□□ 0.42
RDX-201ENST00000343115 FRMD5Q7Z6J6 570 aa17.68■□□□□ 0.42
RDX-201ENST00000343115 IRF2BP1Q8IU81 584 aa17.68■□□□□ 0.42
RDX-201ENST00000343115 PASD1Q8IV76 773 aa17.68■□□□□ 0.42
RDX-201ENST00000343115 TCP11Q8WWU5 503 aa17.68■□□□□ 0.42
RDX-201ENST00000343115 PRR12Q9ULL5 1215 aa17.68■□□□□ 0.42
RDX-201ENST00000343115 A0A1W2PQJ5 194 aa17.67■□□□□ 0.42
RDX-201ENST00000343115 KLRC4O43908 158 aa17.67■□□□□ 0.42
RDX-201ENST00000343115 EYA4O95677 639 aa17.67■□□□□ 0.42
RDX-201ENST00000343115 IRAK1P51617 712 aa17.67■□□□□ 0.42
RDX-201ENST00000343115 ZNF394Q53GI3 561 aa17.67■□□□□ 0.42
RDX-201ENST00000343115 HHATQ5VTY9 493 aa17.67■□□□□ 0.42
RDX-201ENST00000343115 TADA2BQ86TJ2 420 aa17.67■□□□□ 0.42
RDX-201ENST00000343115 CCDC13Q8IYE1 715 aa17.67■□□□□ 0.42
RDX-201ENST00000343115 ARL8AQ96BM9 186 aa17.67■□□□□ 0.42
RDX-201ENST00000343115 HIP1RO75146 1068 aa17.67■□□□□ 0.42
RDX-201ENST00000343115 MAGEA9P43362 315 aa17.67■□□□□ 0.42
RDX-201ENST00000343115 TBC1D31Q96DN5 1066 aa17.67■□□□□ 0.42
RDX-201ENST00000343115 CD58P19256 250 aa17.67■□□□□ 0.42
RDX-201ENST00000343115 METTL13Q8N6R0 699 aa17.67■□□□□ 0.42
RDX-201ENST00000343115 FLAD1Q8NFF5 587 aa17.67■□□□□ 0.42
RDX-201ENST00000343115 DDX4Q9NQI0 724 aaKnown RBP17.67■□□□□ 0.42
RDX-201ENST00000343115 FBXO28Q9NVF7 368 aa17.67■□□□□ 0.42
RDX-201ENST00000343115 ECEL1O95672 775 aa17.66■□□□□ 0.42
RDX-201ENST00000343115 LMBRD2Q68DH5 695 aaPredicted RBP17.66■□□□□ 0.42
RDX-201ENST00000343115 WDR93Q6P2C0 686 aa17.66■□□□□ 0.42
RDX-201ENST00000343115 SLC51AQ86UW1 340 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms