RNA–Protein interactions for RNA: ENST00000332303.5

NSMCE3-201, Transcript of NSE3 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 BASIC

Gene NSMCE3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE3-201ENST00000332303 GPC5P78333 572 aa17.79■□□□□ 0.44
NSMCE3-201ENST00000332303 ARID5BQ14865 1188 aa17.79■□□□□ 0.44
NSMCE3-201ENST00000332303 KNOP1Q1ED39 458 aaKnown RBP17.79■□□□□ 0.44
NSMCE3-201ENST00000332303 NEDD1Q8NHV4 660 aa17.79■□□□□ 0.44
NSMCE3-201ENST00000332303 PPP1R16BQ96T49 567 aa17.79■□□□□ 0.44
NSMCE3-201ENST00000332303 RRP15Q9Y3B9 282 aaKnown RBP17.79■□□□□ 0.44
NSMCE3-201ENST00000332303 TOM1L1O75674 476 aa17.79■□□□□ 0.44
NSMCE3-201ENST00000332303 EPHB1P54762 984 aa17.79■□□□□ 0.44
NSMCE3-201ENST00000332303 CALR3Q96L12 384 aaKnown RBP17.79■□□□□ 0.44
NSMCE3-201ENST00000332303 ABCB11O95342 1321 aa17.78■□□□□ 0.44
NSMCE3-201ENST00000332303 A0A087WUV0 522 aaPredicted RBP17.78■□□□□ 0.44
NSMCE3-201ENST00000332303 P4HBP07237 508 aaKnown RBP17.78■□□□□ 0.44
NSMCE3-201ENST00000332303 QARSP47897 775 aaKnown RBP17.78■□□□□ 0.44
NSMCE3-201ENST00000332303 COASYQ13057 564 aa17.78■□□□□ 0.44
NSMCE3-201ENST00000332303 HSP90AA5PQ58FG0 334 aa17.78■□□□□ 0.44
NSMCE3-201ENST00000332303 PSPC1Q8WXF1 523 aaKnown RBP17.78■□□□□ 0.44
NSMCE3-201ENST00000332303 RNF146Q9NTX7 359 aa17.78■□□□□ 0.44
NSMCE3-201ENST00000332303 ZHX2Q9Y6X8 837 aa17.78■□□□□ 0.44
NSMCE3-201ENST00000332303 PALMO75781 387 aa17.78■□□□□ 0.44
NSMCE3-201ENST00000332303 CDC27P30260 824 aa17.78■□□□□ 0.44
NSMCE3-201ENST00000332303 TNFAIP2Q03169 654 aa17.78■□□□□ 0.44
NSMCE3-201ENST00000332303 OSBPL5Q9H0X9 879 aaPredicted RBP17.78■□□□□ 0.44
NSMCE3-201ENST00000332303 LCMT1Q9UIC8 334 aa17.78■□□□□ 0.44
NSMCE3-201ENST00000332303 PPP1R9AQ9ULJ8 1098 aa17.78■□□□□ 0.44
NSMCE3-201ENST00000332303 POTEB3A0JP26 581 aa17.78■□□□□ 0.44
NSMCE3-201ENST00000332303 POTECB2RU33 542 aa17.78■□□□□ 0.44
NSMCE3-201ENST00000332303 ORC4O43929 436 aa17.78■□□□□ 0.44
NSMCE3-201ENST00000332303 NMT2O60551 498 aa17.78■□□□□ 0.44
NSMCE3-201ENST00000332303 QRICH1Q2TAL8 776 aa17.78■□□□□ 0.44
NSMCE3-201ENST00000332303 ZNF394Q53GI3 561 aa17.78■□□□□ 0.44
NSMCE3-201ENST00000332303 POTEBQ6S5H4 581 aa17.78■□□□□ 0.44
NSMCE3-201ENST00000332303 ALDH8A1Q9H2A2 487 aaPredicted RBP17.78■□□□□ 0.44
NSMCE3-201ENST00000332303 GINM1Q9NU53 330 aa17.78■□□□□ 0.44
NSMCE3-201ENST00000332303 CPDO75976 1380 aa17.78■□□□□ 0.44
NSMCE3-201ENST00000332303 KDM6BO15054 1643 aa17.78■□□□□ 0.44
NSMCE3-201ENST00000332303 UBN2Q6ZU65 1347 aa17.78■□□□□ 0.44
NSMCE3-201ENST00000332303 LRRC53A6NM62 1247 aa17.78■□□□□ 0.44
NSMCE3-201ENST00000332303 ACSL3O95573 720 aa17.78■□□□□ 0.44
NSMCE3-201ENST00000332303 FDX1P10109 184 aa17.78■□□□□ 0.44
NSMCE3-201ENST00000332303 TSGA10IPQ3SY00 556 aa17.78■□□□□ 0.44
NSMCE3-201ENST00000332303 PPP6R3Q5H9R7 873 aaPredicted RBP17.78■□□□□ 0.44
NSMCE3-201ENST00000332303 FBXO38Q6PIJ6 1188 aa17.78■□□□□ 0.44
NSMCE3-201ENST00000332303 PRPF38AQ8NAV1 312 aaKnown RBP17.78■□□□□ 0.44
NSMCE3-201ENST00000332303 KLC2Q9H0B6 622 aa17.78■□□□□ 0.44
NSMCE3-201ENST00000332303 SLC4A1P02730 911 aa17.77■□□□□ 0.44
NSMCE3-201ENST00000332303 ELF1P32519 619 aa17.77■□□□□ 0.44
NSMCE3-201ENST00000332303 PHKA2P46019 1235 aa17.77■□□□□ 0.44
NSMCE3-201ENST00000332303 CDO1Q16878 200 aa17.77■□□□□ 0.44
NSMCE3-201ENST00000332303 SNRNP48Q6IEG0 339 aaKnown RBP17.77■□□□□ 0.44
NSMCE3-201ENST00000332303 RAVER2Q9HCJ3 691 aaKnown RBP17.77■□□□□ 0.44
NSMCE3-201ENST00000332303 MAGED2Q9UNF1 606 aaPredicted RBP17.77■□□□□ 0.44
NSMCE3-201ENST00000332303 PNMA6AP0CW24 399 aaPredicted RBP17.77■□□□□ 0.44
NSMCE3-201ENST00000332303 HSPA8P11142 646 aaKnown RBP17.77■□□□□ 0.44
NSMCE3-201ENST00000332303 SPDL1Q96EA4 605 aa17.77■□□□□ 0.44
NSMCE3-201ENST00000332303 DDX27Q96GQ7 796 aaKnown RBP17.77■□□□□ 0.44
NSMCE3-201ENST00000332303 STRIP2Q9ULQ0 834 aa17.77■□□□□ 0.44
NSMCE3-201ENST00000332303 SNX24Q9Y343 169 aa17.77■□□□□ 0.44
NSMCE3-201ENST00000332303 MAP3K4Q9Y6R4 1608 aa17.77■□□□□ 0.44
NSMCE3-201ENST00000332303 FAM196BA6NMK8 535 aa17.77■□□□□ 0.43
NSMCE3-201ENST00000332303 CALB1P05937 261 aa17.77■□□□□ 0.43
NSMCE3-201ENST00000332303 GCKP35557 465 aa17.77■□□□□ 0.43
NSMCE3-201ENST00000332303 WRNIP1Q96S55 665 aa17.77■□□□□ 0.43
NSMCE3-201ENST00000332303 ZWILCHQ9H900 591 aa17.77■□□□□ 0.43
NSMCE3-201ENST00000332303 ATG16L1Q676U5 607 aa17.77■□□□□ 0.43
NSMCE3-201ENST00000332303 DHX38Q92620 1227 aaKnown RBP17.77■□□□□ 0.43
NSMCE3-201ENST00000332303 FNDC3AQ9Y2H6 1198 aaKnown RBP17.77■□□□□ 0.43
NSMCE3-201ENST00000332303 PNPLA7Q6ZV29 1317 aa17.76■□□□□ 0.43
NSMCE3-201ENST00000332303 PMLP29590 882 aa17.76■□□□□ 0.43
NSMCE3-201ENST00000332303 ARL4CP56559 192 aa17.76■□□□□ 0.43
NSMCE3-201ENST00000332303 BANK1Q8NDB2 785 aa17.76■□□□□ 0.43
NSMCE3-201ENST00000332303 ACTR5Q9H9F9 607 aaPredicted RBP17.76■□□□□ 0.43
NSMCE3-201ENST00000332303 DENND3A2RUS2 1198 aa17.76■□□□□ 0.43
NSMCE3-201ENST00000332303 TOGARAM2Q6ZUX3 1019 aa17.76■□□□□ 0.43
NSMCE3-201ENST00000332303 DYDC2Q96IM9 177 aa17.76■□□□□ 0.43
NSMCE3-201ENST00000332303 GOLPH3LQ9H4A5 285 aa17.76■□□□□ 0.43
NSMCE3-201ENST00000332303 UBN1Q9NPG3 1134 aa17.76■□□□□ 0.43
NSMCE3-201ENST00000332303 ECE2O60344 883 aa17.76■□□□□ 0.43
NSMCE3-201ENST00000332303 GNAT1P11488 350 aa17.76■□□□□ 0.43
NSMCE3-201ENST00000332303 CASP2P42575 452 aa17.76■□□□□ 0.43
NSMCE3-201ENST00000332303 ZNF699Q32M78 642 aa17.76■□□□□ 0.43
NSMCE3-201ENST00000332303 NUGGCQ68CJ6 796 aa17.76■□□□□ 0.43
NSMCE3-201ENST00000332303 SLC16A4O15374 487 aa17.75■□□□□ 0.43
NSMCE3-201ENST00000332303 SPP2Q13103 211 aa17.75■□□□□ 0.43
NSMCE3-201ENST00000332303 ZNF568Q3ZCX4 644 aa17.75■□□□□ 0.43
NSMCE3-201ENST00000332303 TMEM270Q6UE05 265 aa17.75■□□□□ 0.43
NSMCE3-201ENST00000332303 DNAJC17Q9NVM6 304 aaKnown RBP17.75■□□□□ 0.43
NSMCE3-201ENST00000332303 F8W8V4 182 aa17.75■□□□□ 0.43
NSMCE3-201ENST00000332303 CIITAP33076 1130 aa17.75■□□□□ 0.43
NSMCE3-201ENST00000332303 USP11P51784 963 aa17.75■□□□□ 0.43
NSMCE3-201ENST00000332303 GPSM2P81274 684 aa17.75■□□□□ 0.43
NSMCE3-201ENST00000332303 ANKRD20A4Q4UJ75 823 aa17.75■□□□□ 0.43
NSMCE3-201ENST00000332303 NAALADL2Q58DX5 795 aa17.75■□□□□ 0.43
NSMCE3-201ENST00000332303 ANKRD20A8PQ5CZ79 823 aa17.75■□□□□ 0.43
NSMCE3-201ENST00000332303 ANKRD20A2Q5SQ80 823 aa17.75■□□□□ 0.43
NSMCE3-201ENST00000332303 ANKRD20A1Q5TYW2 823 aa17.75■□□□□ 0.43
NSMCE3-201ENST00000332303 ARHGEF1Q92888 912 aaKnown RBP17.75■□□□□ 0.43
NSMCE3-201ENST00000332303 CHMP6Q96FZ7 201 aa17.75■□□□□ 0.43
NSMCE3-201ENST00000332303 FAM84BQ96KN1 310 aaPredicted RBP17.75■□□□□ 0.43
NSMCE3-201ENST00000332303 SPDYE2BA6NHP3 402 aa17.75■□□□□ 0.43
NSMCE3-201ENST00000332303 SMIM24O75264 130 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms