RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 TCP11X1B4DZS4 312 aa13.85□□□□□ -0.19
CCDC60-201ENST00000327554 O00370 1275 aa13.85□□□□□ -0.19
CCDC60-201ENST00000327554 NEFHP12036 1026 aa13.85□□□□□ -0.19
CCDC60-201ENST00000327554 CCNB1P14635 433 aa13.85□□□□□ -0.19
CCDC60-201ENST00000327554 SLC9A1P19634 815 aa13.85□□□□□ -0.19
CCDC60-201ENST00000327554 SLCO1A2P46721 670 aa13.85□□□□□ -0.19
CCDC60-201ENST00000327554 GYG1P46976 350 aa13.85□□□□□ -0.19
CCDC60-201ENST00000327554 FXR2P51116 673 aaKnown RBP eCLIP13.85□□□□□ -0.19
CCDC60-201ENST00000327554 RPS6KA3P51812 740 aa13.85□□□□□ -0.19
CCDC60-201ENST00000327554 DRG2P55039 364 aaKnown RBP13.85□□□□□ -0.19
CCDC60-201ENST00000327554 CHRNDQ07001 517 aa13.85□□□□□ -0.19
CCDC60-201ENST00000327554 KCNH2Q12809 1159 aa13.85□□□□□ -0.19
CCDC60-201ENST00000327554 KIAA1755Q5JYT7 1200 aa13.85□□□□□ -0.19
CCDC60-201ENST00000327554 CWF19L1Q69YN2 538 aaKnown RBP13.85□□□□□ -0.19
CCDC60-201ENST00000327554 DGKHQ86XP1 1220 aa13.85□□□□□ -0.19
CCDC60-201ENST00000327554 JAMLQ86YT9 394 aa13.85□□□□□ -0.19
CCDC60-201ENST00000327554 ZNF34Q8IZ26 560 aa13.85□□□□□ -0.19
CCDC60-201ENST00000327554 UHMK1Q8TAS1 419 aaKnown RBP13.85□□□□□ -0.19
CCDC60-201ENST00000327554 TBCKQ8TEA7 893 aa13.85□□□□□ -0.19
CCDC60-201ENST00000327554 RXFP1Q9HBX9 757 aa13.85□□□□□ -0.19
CCDC60-201ENST00000327554 CPSF2Q9P2I0 782 aaKnown RBP13.85□□□□□ -0.19
CCDC60-201ENST00000327554 NKX1-2Q9UD57 310 aaPredicted RBP13.85□□□□□ -0.19
CCDC60-201ENST00000327554 PRKAG3Q9UGI9 489 aa13.85□□□□□ -0.19
CCDC60-201ENST00000327554 LRRC42Q9Y546 428 aa13.85□□□□□ -0.19
CCDC60-201ENST00000327554 BCL9O00512 1426 aa13.85□□□□□ -0.19
CCDC60-201ENST00000327554 FLOT1O75955 427 aa13.84□□□□□ -0.19
CCDC60-201ENST00000327554 UCHL3P15374 230 aa13.84□□□□□ -0.19
CCDC60-201ENST00000327554 FERP16591 822 aa13.84□□□□□ -0.19
CCDC60-201ENST00000327554 DIXDC1Q155Q3 683 aa13.84□□□□□ -0.19
CCDC60-201ENST00000327554 TMEM119Q4V9L6 283 aa13.84□□□□□ -0.19
CCDC60-201ENST00000327554 CCDC38Q502W7 563 aa13.84□□□□□ -0.19
CCDC60-201ENST00000327554 FAM26FQ5R3K3 315 aa13.84□□□□□ -0.19
CCDC60-201ENST00000327554 CROCCP2Q86T23 111 aa13.84□□□□□ -0.19
CCDC60-201ENST00000327554 EXOC3L1Q86VI1 746 aa13.84□□□□□ -0.19
CCDC60-201ENST00000327554 ZC3H3Q8IXZ2 948 aaKnown RBP13.84□□□□□ -0.19
CCDC60-201ENST00000327554 ANKLE1Q8NAG6 615 aa13.84□□□□□ -0.19
CCDC60-201ENST00000327554 UTP4Q969X6 686 aaKnown RBP13.84□□□□□ -0.19
CCDC60-201ENST00000327554 DBR1Q9UK59 544 aaKnown RBP13.84□□□□□ -0.19
CCDC60-201ENST00000327554 AMFRQ9UKV5 643 aa13.84□□□□□ -0.19
CCDC60-201ENST00000327554 ARL2BPQ9Y2Y0 163 aa13.84□□□□□ -0.19
CCDC60-201ENST00000327554 KAT6BQ8WYB5 2073 aa13.84□□□□□ -0.19
CCDC60-201ENST00000327554 POTEMA6NI47 508 aa13.84□□□□□ -0.19
CCDC60-201ENST00000327554 MAP3K13O43283 966 aa13.84□□□□□ -0.19
CCDC60-201ENST00000327554 NAPAP54920 295 aa13.84□□□□□ -0.19
CCDC60-201ENST00000327554 TFAP4Q01664 338 aa13.84□□□□□ -0.19
CCDC60-201ENST00000327554 LRRC14Q15048 493 aa13.84□□□□□ -0.19
CCDC60-201ENST00000327554 ADAT2Q7Z6V5 191 aaKnown RBP13.84□□□□□ -0.19
CCDC60-201ENST00000327554 NELFCDQ8IXH7 590 aa13.84□□□□□ -0.19
CCDC60-201ENST00000327554 RMDN2Q96LZ7 410 aa13.84□□□□□ -0.19
CCDC60-201ENST00000327554 TMOD3Q9NYL9 352 aa13.84□□□□□ -0.19
CCDC60-201ENST00000327554 INTUQ9ULD6 942 aa13.84□□□□□ -0.19
CCDC60-201ENST00000327554 PPP1R9AQ9ULJ8 1098 aa13.84□□□□□ -0.19
CCDC60-201ENST00000327554 PALM3A6NDB9 673 aaPredicted RBP13.83□□□□□ -0.2
CCDC60-201ENST00000327554 DDX3XO00571 662 aaKnown RBP eCLIP13.83□□□□□ -0.2
CCDC60-201ENST00000327554 TUBP50607 506 aa13.83□□□□□ -0.2
CCDC60-201ENST00000327554 PAPOLAP51003 745 aaKnown RBP13.83□□□□□ -0.2
CCDC60-201ENST00000327554 TRAF1Q13077 416 aa13.83□□□□□ -0.2
CCDC60-201ENST00000327554 ORC2Q13416 577 aaPredicted RBP13.83□□□□□ -0.2
CCDC60-201ENST00000327554 DHX34Q14147 1143 aaKnown RBP13.83□□□□□ -0.2
CCDC60-201ENST00000327554 PPP2R5EQ16537 467 aa13.83□□□□□ -0.2
CCDC60-201ENST00000327554 SBK1Q52WX2 424 aa13.83□□□□□ -0.2
CCDC60-201ENST00000327554 MFSD5Q6N075 450 aa13.83□□□□□ -0.2
CCDC60-201ENST00000327554 SPATA21Q7Z572 469 aa13.83□□□□□ -0.2
CCDC60-201ENST00000327554 MFN1Q8IWA4 741 aa13.83□□□□□ -0.2
CCDC60-201ENST00000327554 CCDC113Q9H0I3 377 aa13.83□□□□□ -0.2
CCDC60-201ENST00000327554 STMN4Q9H169 189 aaPredicted RBP13.83□□□□□ -0.2
CCDC60-201ENST00000327554 KCTD10Q9H3F6 313 aa13.83□□□□□ -0.2
CCDC60-201ENST00000327554 AJAP1Q9UKB5 411 aaPredicted RBP13.83□□□□□ -0.2
CCDC60-201ENST00000327554 SMCO2A6NFE2 343 aa13.83□□□□□ -0.2
CCDC60-201ENST00000327554 WTIPA6NIX2 430 aaPredicted RBP13.83□□□□□ -0.2
CCDC60-201ENST00000327554 SPDYE5A6NIY4 337 aa13.83□□□□□ -0.2
CCDC60-201ENST00000327554 RASGRF2O14827 1237 aa13.83□□□□□ -0.2
CCDC60-201ENST00000327554 RIPK2O43353 540 aa13.83□□□□□ -0.2
CCDC60-201ENST00000327554 GNAT1P11488 350 aa13.83□□□□□ -0.2
CCDC60-201ENST00000327554 ANXA13P27216 316 aa13.83□□□□□ -0.2
CCDC60-201ENST00000327554 EPS15P42566 896 aa13.83□□□□□ -0.2
CCDC60-201ENST00000327554 PTGIRP43119 386 aa13.83□□□□□ -0.2
CCDC60-201ENST00000327554 MGAT5Q09328 741 aa13.83□□□□□ -0.2
CCDC60-201ENST00000327554 MAPK7Q13164 816 aa13.83□□□□□ -0.2
CCDC60-201ENST00000327554 CALCRLQ16602 461 aa13.83□□□□□ -0.2
CCDC60-201ENST00000327554 ECM1Q16610 540 aa13.83□□□□□ -0.2
CCDC60-201ENST00000327554 BARGINQ6ZT62 677 aa13.83□□□□□ -0.2
CCDC60-201ENST00000327554 TAOK1Q7L7X3 1001 aa13.83□□□□□ -0.2
CCDC60-201ENST00000327554 OLIG1Q8TAK6 271 aa13.83□□□□□ -0.2
CCDC60-201ENST00000327554 SNX29Q8TEQ0 813 aa13.83□□□□□ -0.2
CCDC60-201ENST00000327554 TSC22D3Q99576 134 aa13.83□□□□□ -0.2
CCDC60-201ENST00000327554 LRRC27Q9C0I9 530 aa13.83□□□□□ -0.2
CCDC60-201ENST00000327554 CPVLQ9H3G5 476 aa13.83□□□□□ -0.2
CCDC60-201ENST00000327554 OSGEPQ9NPF4 335 aa13.83□□□□□ -0.2
CCDC60-201ENST00000327554 PAPOLBQ9NRJ5 636 aaKnown RBP13.83□□□□□ -0.2
CCDC60-201ENST00000327554 TBC1D7Q9P0N9 293 aa13.83□□□□□ -0.2
CCDC60-201ENST00000327554 ANKIB1Q9P2G1 1089 aa13.83□□□□□ -0.2
CCDC60-201ENST00000327554 ARPP21Q9UBL0 812 aaPredicted RBP13.83□□□□□ -0.2
CCDC60-201ENST00000327554 PCDHA2Q9Y5H9 948 aa13.83□□□□□ -0.2
CCDC60-201ENST00000327554 MPHOSPH10O00566 681 aaKnown RBP13.82□□□□□ -0.2
CCDC60-201ENST00000327554 SLC37A4O43826 429 aa13.82□□□□□ -0.2
CCDC60-201ENST00000327554 FGFR4P22455 802 aa13.82□□□□□ -0.2
CCDC60-201ENST00000327554 SKIV2L2P42285 1042 aaKnown RBP13.82□□□□□ -0.2
CCDC60-201ENST00000327554 RPL21P46778 160 aaKnown RBP13.82□□□□□ -0.2
CCDC60-201ENST00000327554 SLC5A9Q2M3M2 681 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms