RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 Q4G0T1 1027 aa15.04■□□□□ -0
MKS1-201ENST00000313863 CATSPER3Q86XQ3 398 aa15.04■□□□□ -0
MKS1-201ENST00000313863 DCAF4Q8WV16 495 aa15.04■□□□□ -0
MKS1-201ENST00000313863 ARHGEF1Q92888 912 aaKnown RBP15.04■□□□□ -0
MKS1-201ENST00000313863 TATDN2Q93075 761 aa15.04■□□□□ -0
MKS1-201ENST00000313863 GJA10Q969M2 543 aa15.04■□□□□ -0
MKS1-201ENST00000313863 SLC35C1Q96A29 364 aa15.04■□□□□ -0
MKS1-201ENST00000313863 CCDC17Q96LX7 622 aa15.04■□□□□ -0
MKS1-201ENST00000313863 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.04■□□□□ -0
MKS1-201ENST00000313863 TAF1LQ8IZX4 1826 aa15.04■□□□□ -0
MKS1-201ENST00000313863 TULP1O00294 542 aaPredicted RBP15.04■□□□□ -0
MKS1-201ENST00000313863 EIF3DO15371 548 aaKnown RBP eCLIP15.04■□□□□ -0
MKS1-201ENST00000313863 FGGP02679 453 aa15.04■□□□□ -0
MKS1-201ENST00000313863 RFC4P35249 363 aa15.04■□□□□ -0
MKS1-201ENST00000313863 SOX5P35711 763 aa15.04■□□□□ -0
MKS1-201ENST00000313863 CASP5P51878 434 aa15.04■□□□□ -0
MKS1-201ENST00000313863 GALCP54803 685 aa15.04■□□□□ -0
MKS1-201ENST00000313863 MAGOHP61326 146 aaKnown RBP15.04■□□□□ -0
MKS1-201ENST00000313863 PICALMQ13492 652 aa15.04■□□□□ -0
MKS1-201ENST00000313863 BYSLQ13895 437 aaKnown RBP15.04■□□□□ -0
MKS1-201ENST00000313863 TTBK2Q6IQ55 1244 aa15.04■□□□□ -0
MKS1-201ENST00000313863 RAPGEF5Q92565 580 aa15.04■□□□□ -0
MKS1-201ENST00000313863 MAGOHBQ96A72 148 aaKnown RBP15.04■□□□□ -0
MKS1-201ENST00000313863 TLCD1Q96CP7 247 aa15.04■□□□□ -0
MKS1-201ENST00000313863 RBM17Q96I25 401 aaKnown RBP15.04■□□□□ -0
MKS1-201ENST00000313863 GPR101Q96P66 508 aaPredicted RBP15.04■□□□□ -0
MKS1-201ENST00000313863 MKNK1Q9BUB5 465 aa15.04■□□□□ -0
MKS1-201ENST00000313863 STK33Q9BYT3 514 aa15.04■□□□□ -0
MKS1-201ENST00000313863 STMN4Q9H169 189 aaPredicted RBP15.04■□□□□ -0
MKS1-201ENST00000313863 KDM4CQ9H3R0 1056 aa15.04■□□□□ -0
MKS1-201ENST00000313863 GOLPH3Q9H4A6 298 aa15.04■□□□□ -0
MKS1-201ENST00000313863 POLD4Q9HCU8 107 aa15.04■□□□□ -0
MKS1-201ENST00000313863 SLC40A1Q9NP59 571 aa15.04■□□□□ -0
MKS1-201ENST00000313863 OLFML3Q9NRN5 406 aa15.04■□□□□ -0
MKS1-201ENST00000313863 PCDHA1Q9Y5I3 950 aa15.04■□□□□ -0
MKS1-201ENST00000313863 QSER1Q2KHR3 1735 aa15.03■□□□□ -0
MKS1-201ENST00000313863 UBE4BO95155 1302 aa15.03■□□□□ -0
MKS1-201ENST00000313863 CCDC169A6NNP5 214 aa15.03■□□□□ -0
MKS1-201ENST00000313863 NUDT17P0C025 328 aa15.03■□□□□ -0
MKS1-201ENST00000313863 ITGA4P13612 1032 aa15.03■□□□□ -0
MKS1-201ENST00000313863 PSMC2P35998 433 aaKnown RBP15.03■□□□□ -0
MKS1-201ENST00000313863 DRG2P55039 364 aaKnown RBP15.03■□□□□ -0
MKS1-201ENST00000313863 KCNQ4P56696 695 aa15.03■□□□□ -0
MKS1-201ENST00000313863 ARHGAP4P98171 946 aa15.03■□□□□ -0
MKS1-201ENST00000313863 DR1Q01658 176 aa15.03■□□□□ -0
MKS1-201ENST00000313863 PABPC4Q13310 644 aaKnown RBP eCLIP15.03■□□□□ -0
MKS1-201ENST00000313863 STXBP4Q6ZWJ1 553 aa15.03■□□□□ -0
MKS1-201ENST00000313863 ANKS4BQ8N8V4 417 aa15.03■□□□□ -0
MKS1-201ENST00000313863 SLC30A5Q8TAD4 765 aa15.03■□□□□ -0
MKS1-201ENST00000313863 ETNPPLQ8TBG4 499 aa15.03■□□□□ -0
MKS1-201ENST00000313863 MAGEC3Q8TD91 643 aa15.03■□□□□ -0
MKS1-201ENST00000313863 ASTN1O14525 1302 aa15.02■□□□□ -0
MKS1-201ENST00000313863 GCNT3O95395 438 aa15.02■□□□□ -0
MKS1-201ENST00000313863 RFX1P22670 979 aa15.02■□□□□ -0
MKS1-201ENST00000313863 SLC16A2P36021 539 aa15.02■□□□□ -0
MKS1-201ENST00000313863 STAT3P40763 770 aa15.02■□□□□ -0
MKS1-201ENST00000313863 POU5F1Q01860 360 aaKnown RBP15.02■□□□□ -0
MKS1-201ENST00000313863 SPIRE1Q08AE8 756 aa15.02■□□□□ -0
MKS1-201ENST00000313863 SNCBQ16143 134 aa15.02■□□□□ -0
MKS1-201ENST00000313863 QRICH1Q2TAL8 776 aa15.02■□□□□ -0
MKS1-201ENST00000313863 ANKRD20A8PQ5CZ79 823 aa15.02■□□□□ -0
MKS1-201ENST00000313863 CERKQ8TCT0 537 aa15.02■□□□□ -0
MKS1-201ENST00000313863 VTI1AQ96AJ9 217 aa15.02■□□□□ -0
MKS1-201ENST00000313863 CHMP6Q96FZ7 201 aa15.02■□□□□ -0
MKS1-201ENST00000313863 ERP44Q9BS26 406 aa15.02■□□□□ -0
MKS1-201ENST00000313863 POLR3CQ9BUI4 534 aaPredicted RBP15.02■□□□□ -0
MKS1-201ENST00000313863 TXLNGYQ9BZA5 131 aa15.02■□□□□ -0
MKS1-201ENST00000313863 PARP2Q9UGN5 583 aa15.02■□□□□ -0
MKS1-201ENST00000313863 USP17L15C9J2P7 530 aa15.02□□□□□ -0.01
MKS1-201ENST00000313863 USP17L13C9JLJ4 530 aa15.02□□□□□ -0.01
MKS1-201ENST00000313863 USP17L11C9JVI0 530 aa15.02□□□□□ -0.01
MKS1-201ENST00000313863 USP17L18D6R9N7 530 aa15.02□□□□□ -0.01
MKS1-201ENST00000313863 USP17L22D6RA61 530 aa15.02□□□□□ -0.01
MKS1-201ENST00000313863 USP17L17D6RBQ6 530 aa15.02□□□□□ -0.01
MKS1-201ENST00000313863 USP17L19D6RCP7 530 aa15.02□□□□□ -0.01
MKS1-201ENST00000313863 USP17L20D6RJB6 530 aa15.02□□□□□ -0.01
MKS1-201ENST00000313863 BBOX1O75936 387 aa15.02□□□□□ -0.01
MKS1-201ENST00000313863 EYA4O95677 639 aa15.02□□□□□ -0.01
MKS1-201ENST00000313863 TMOD1P28289 359 aa15.02□□□□□ -0.01
MKS1-201ENST00000313863 HOXD13P35453 343 aa15.02□□□□□ -0.01
MKS1-201ENST00000313863 USP17L24Q0WX57 530 aa15.02□□□□□ -0.01
MKS1-201ENST00000313863 PRR16Q569H4 304 aa15.02□□□□□ -0.01
MKS1-201ENST00000313863 USP17L6PQ6QN14 398 aa15.02□□□□□ -0.01
MKS1-201ENST00000313863 KCTD1Q719H9 257 aa15.02□□□□□ -0.01
MKS1-201ENST00000313863 SMIM5Q71RC9 77 aa15.02□□□□□ -0.01
MKS1-201ENST00000313863 FAM186BQ8IYM0 893 aa15.02□□□□□ -0.01
MKS1-201ENST00000313863 SLC35G2Q8TBE7 412 aa15.02□□□□□ -0.01
MKS1-201ENST00000313863 NEK9Q8TD19 979 aa15.02□□□□□ -0.01
MKS1-201ENST00000313863 PGM2Q96G03 612 aa15.02□□□□□ -0.01
MKS1-201ENST00000313863 DPH5Q9H2P9 285 aa15.02□□□□□ -0.01
MKS1-201ENST00000313863 CCNL1Q9UK58 526 aaPredicted RBP15.02□□□□□ -0.01
MKS1-201ENST00000313863 LOXHD1Q8IVV2 1947 aa15.01□□□□□ -0.01
MKS1-201ENST00000313863 MIF4GDA9UHW6 222 aaKnown RBP15.01□□□□□ -0.01
MKS1-201ENST00000313863 MPHOSPH10O00566 681 aaKnown RBP15.01□□□□□ -0.01
MKS1-201ENST00000313863 EVI5O60447 810 aa15.01□□□□□ -0.01
MKS1-201ENST00000313863 BUB1BO60566 1050 aaPredicted RBP15.01□□□□□ -0.01
MKS1-201ENST00000313863 FLT3P36888 993 aa15.01□□□□□ -0.01
MKS1-201ENST00000313863 ERMARDQ5T6L9 678 aa15.01□□□□□ -0.01
MKS1-201ENST00000313863 DENND2CQ68D51 928 aa15.01□□□□□ -0.01
MKS1-201ENST00000313863 DUPD1Q68J44 220 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 152.7 ms