RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 ASIC1P78348 528 aa11.32□□□□□ -0.6
MSRB3-201ENST00000308259 SKOR1P84550 965 aa11.32□□□□□ -0.6
MSRB3-201ENST00000308259 TLDC1Q6P9B6 456 aa11.32□□□□□ -0.6
MSRB3-201ENST00000308259 CHMP6Q96FZ7 201 aa11.32□□□□□ -0.6
MSRB3-201ENST00000308259 RAB3IPQ96QF0 476 aaPredicted RBP11.32□□□□□ -0.6
MSRB3-201ENST00000308259 NUDCD1Q96RS6 583 aa11.32□□□□□ -0.6
MSRB3-201ENST00000308259 PCDHA6Q9UN73 950 aa11.32□□□□□ -0.6
MSRB3-201ENST00000308259 PCDHA8Q9Y5H6 950 aa11.32□□□□□ -0.6
MSRB3-201ENST00000308259 TXNDC9O14530 226 aa11.31□□□□□ -0.6
MSRB3-201ENST00000308259 HNRNPRO43390 633 aaKnown RBP11.31□□□□□ -0.6
MSRB3-201ENST00000308259 LINGO3P0C6S8 592 aa11.31□□□□□ -0.6
MSRB3-201ENST00000308259 PDE4DQ08499 809 aa11.31□□□□□ -0.6
MSRB3-201ENST00000308259 ZBTB17Q13105 803 aa11.31□□□□□ -0.6
MSRB3-201ENST00000308259 TTLL12Q14166 644 aaPredicted RBP11.31□□□□□ -0.6
MSRB3-201ENST00000308259 DYMQ7RTS9 669 aa11.31□□□□□ -0.6
MSRB3-201ENST00000308259 SH3GL2Q99962 352 aa11.31□□□□□ -0.6
MSRB3-201ENST00000308259 SIKE1Q9BRV8 207 aa11.31□□□□□ -0.6
MSRB3-201ENST00000308259 TUBGCP2Q9BSJ2 902 aa11.31□□□□□ -0.6
MSRB3-201ENST00000308259 FAM207AQ9NSI2 230 aaPredicted RBP11.31□□□□□ -0.6
MSRB3-201ENST00000308259 FBXO9Q9UK97 447 aaPredicted RBP11.31□□□□□ -0.6
MSRB3-201ENST00000308259 PCDHGA4Q9Y5G9 962 aa11.31□□□□□ -0.6
MSRB3-201ENST00000308259 SMAPO00193 183 aa11.31□□□□□ -0.6
MSRB3-201ENST00000308259 TSPY3P0CV98 308 aa11.31□□□□□ -0.6
MSRB3-201ENST00000308259 TSPY8P0CW00 308 aa11.31□□□□□ -0.6
MSRB3-201ENST00000308259 SERPINB3P29508 390 aa11.31□□□□□ -0.6
MSRB3-201ENST00000308259 RCAN1P53805 252 aa11.31□□□□□ -0.6
MSRB3-201ENST00000308259 PTPROQ16827 1216 aa11.31□□□□□ -0.6
MSRB3-201ENST00000308259 ANKRD40Q6AI12 368 aa11.31□□□□□ -0.6
MSRB3-201ENST00000308259 DAAM2Q86T65 1068 aa11.31□□□□□ -0.6
MSRB3-201ENST00000308259 EXOC8Q8IYI6 725 aa11.31□□□□□ -0.6
MSRB3-201ENST00000308259 SIX5Q8N196 739 aa11.31□□□□□ -0.6
MSRB3-201ENST00000308259 ANKRD42Q8N9B4 389 aa11.31□□□□□ -0.6
MSRB3-201ENST00000308259 MAGEC3Q8TD91 643 aa11.31□□□□□ -0.6
MSRB3-201ENST00000308259 ETNK1Q9HBU6 452 aa11.31□□□□□ -0.6
MSRB3-201ENST00000308259 PIM2Q9P1W9 311 aa11.31□□□□□ -0.6
MSRB3-201ENST00000308259 RASAL2Q9UJF2 1139 aa11.31□□□□□ -0.6
MSRB3-201ENST00000308259 PCDHA4Q9UN74 947 aa11.31□□□□□ -0.6
MSRB3-201ENST00000308259 PPEF1O14829 653 aaPredicted RBP11.31□□□□□ -0.6
MSRB3-201ENST00000308259 MMEP08473 750 aa11.31□□□□□ -0.6
MSRB3-201ENST00000308259 UBTFL6P0CB48 400 aaPredicted RBP11.31□□□□□ -0.6
MSRB3-201ENST00000308259 PPP2R2AP63151 447 aa11.31□□□□□ -0.6
MSRB3-201ENST00000308259 AMPD2Q01433 879 aa11.31□□□□□ -0.6
MSRB3-201ENST00000308259 PPP2R5BQ15173 497 aa11.31□□□□□ -0.6
MSRB3-201ENST00000308259 USP17L2Q6R6M4 530 aa11.31□□□□□ -0.6
MSRB3-201ENST00000308259 MDM1Q8TC05 714 aa11.31□□□□□ -0.6
MSRB3-201ENST00000308259 DNAJC9Q8WXX5 260 aa11.31□□□□□ -0.6
MSRB3-201ENST00000308259 UBA5Q9GZZ9 404 aa11.31□□□□□ -0.6
MSRB3-201ENST00000308259 TAF1DQ9H5J8 278 aaPredicted RBP11.31□□□□□ -0.6
MSRB3-201ENST00000308259 RABL2AQ9UBK7 228 aaPredicted RBP11.31□□□□□ -0.6
MSRB3-201ENST00000308259 ITM2BQ9Y287 266 aa11.31□□□□□ -0.6
MSRB3-201ENST00000308259 LRRC10BA6NIK2 292 aa11.3□□□□□ -0.6
MSRB3-201ENST00000308259 PDE2AO00408 941 aaPredicted RBP11.3□□□□□ -0.6
MSRB3-201ENST00000308259 IPO5O00410 1097 aaKnown RBP11.3□□□□□ -0.6
MSRB3-201ENST00000308259 ZCCHC18P0CG32 403 aa11.3□□□□□ -0.6
MSRB3-201ENST00000308259 CBX3Q13185 183 aa11.3□□□□□ -0.6
MSRB3-201ENST00000308259 CFAP221Q4G0U5 840 aa11.3□□□□□ -0.6
MSRB3-201ENST00000308259 CCDC51Q96ER9 411 aa11.3□□□□□ -0.6
MSRB3-201ENST00000308259 UBE2OQ9C0C9 1292 aaKnown RBP11.3□□□□□ -0.6
MSRB3-201ENST00000308259 ITGB4P16144 1822 aa11.3□□□□□ -0.6
MSRB3-201ENST00000308259 MYH13Q9UKX3 1938 aa11.3□□□□□ -0.6
MSRB3-201ENST00000308259 ITIH6Q6UXX5 1313 aa11.3□□□□□ -0.6
MSRB3-201ENST00000308259 LGALS16A8MUM7 142 aa11.3□□□□□ -0.6
MSRB3-201ENST00000308259 SEMA3EO15041 775 aa11.3□□□□□ -0.6
MSRB3-201ENST00000308259 NQO1P15559 274 aaKnown RBP11.3□□□□□ -0.6
MSRB3-201ENST00000308259 LMNB1P20700 586 aa11.3□□□□□ -0.6
MSRB3-201ENST00000308259 ALDH5A1P51649 535 aaPredicted RBP11.3□□□□□ -0.6
MSRB3-201ENST00000308259 TNNC1P63316 161 aa11.3□□□□□ -0.6
MSRB3-201ENST00000308259 SPAG1Q07617 926 aa11.3□□□□□ -0.6
MSRB3-201ENST00000308259 GLE1Q53GS7 698 aaKnown RBP11.3□□□□□ -0.6
MSRB3-201ENST00000308259 FAM133AQ8N9E0 248 aa11.3□□□□□ -0.6
MSRB3-201ENST00000308259 NACA2Q9H009 215 aa11.3□□□□□ -0.6
MSRB3-201ENST00000308259 KANSL2Q9H9L4 492 aa11.3□□□□□ -0.6
MSRB3-201ENST00000308259 RMND1Q9NWS8 449 aa11.3□□□□□ -0.6
MSRB3-201ENST00000308259 CLEC11AQ9Y240 323 aa11.3□□□□□ -0.6
MSRB3-201ENST00000308259 PSMA7O14818 248 aa11.3□□□□□ -0.6
MSRB3-201ENST00000308259 KLRC4O43908 158 aa11.3□□□□□ -0.6
MSRB3-201ENST00000308259 SUN1O94901 812 aa11.3□□□□□ -0.6
MSRB3-201ENST00000308259 CARSP49589 748 aaKnown RBP11.3□□□□□ -0.6
MSRB3-201ENST00000308259 ZNF131P52739 623 aa11.3□□□□□ -0.6
MSRB3-201ENST00000308259 KCNJ2P63252 427 aa11.3□□□□□ -0.6
MSRB3-201ENST00000308259 CAPN12Q6ZSI9 719 aa11.3□□□□□ -0.6
MSRB3-201ENST00000308259 RETREG2Q8NC44 543 aa11.3□□□□□ -0.6
MSRB3-201ENST00000308259 CNOT6LQ96LI5 555 aaKnown RBP11.3□□□□□ -0.6
MSRB3-201ENST00000308259 NHEJ1Q9H9Q4 299 aaPredicted RBP11.3□□□□□ -0.6
MSRB3-201ENST00000308259 MLXIPQ9HAP2 919 aa11.3□□□□□ -0.6
MSRB3-201ENST00000308259 TMEM260Q9NX78 707 aa11.3□□□□□ -0.6
MSRB3-201ENST00000308259 LRWD1Q9UFC0 647 aa11.3□□□□□ -0.6
MSRB3-201ENST00000308259 ROBO1Q9Y6N7 1651 aa11.3□□□□□ -0.6
MSRB3-201ENST00000308259 H7C1D1 291 aa11.29□□□□□ -0.6
MSRB3-201ENST00000308259 EPHB6O15197 1021 aa11.29□□□□□ -0.6
MSRB3-201ENST00000308259 GSTT1P30711 240 aa11.29□□□□□ -0.6
MSRB3-201ENST00000308259 LONP1P36776 959 aaKnown RBP11.29□□□□□ -0.6
MSRB3-201ENST00000308259 TXKP42681 527 aa11.29□□□□□ -0.6
MSRB3-201ENST00000308259 LRRC41Q15345 812 aa11.29□□□□□ -0.6
MSRB3-201ENST00000308259 QPCTQ16769 361 aa11.29□□□□□ -0.6
MSRB3-201ENST00000308259 PPP4R3AQ6IN85 833 aa11.29□□□□□ -0.6
MSRB3-201ENST00000308259 DNAJC14Q6Y2X3 702 aaPredicted RBP11.29□□□□□ -0.6
MSRB3-201ENST00000308259 ARHGAP27Q6ZUM4 889 aa11.29□□□□□ -0.6
MSRB3-201ENST00000308259 TRPM8Q7Z2W7 1104 aa11.29□□□□□ -0.6
MSRB3-201ENST00000308259 TRIM50Q86XT4 487 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms