RNA–Protein interactions for RNA: ENST00000304990.8

COL4A3-201, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-201ENST00000304990 SIX5Q8N196 739 aa11.53□□□□□ -0.56
COL4A3-201ENST00000304990 C12orf76Q8N812 135 aaPredicted RBP11.53□□□□□ -0.56
COL4A3-201ENST00000304990 MRPL43Q8N983 215 aaKnown RBP11.53□□□□□ -0.56
COL4A3-201ENST00000304990 DSCC1Q9BVC3 393 aa11.53□□□□□ -0.56
COL4A3-201ENST00000304990 TMEM117Q9H0C3 514 aa11.53□□□□□ -0.56
COL4A3-201ENST00000304990 DZANK1Q9NVP4 752 aa11.53□□□□□ -0.56
COL4A3-201ENST00000304990 EVPLQ92817 2033 aa11.53□□□□□ -0.56
COL4A3-201ENST00000304990 FAM186AA6NE01 2351 aa11.53□□□□□ -0.56
COL4A3-201ENST00000304990 C2orf71A6NGG8 1288 aa11.52□□□□□ -0.57
COL4A3-201ENST00000304990 HIP1O00291 1037 aa11.52□□□□□ -0.57
COL4A3-201ENST00000304990 PIK3CDO00329 1044 aa11.52□□□□□ -0.57
COL4A3-201ENST00000304990 MAFGO15525 162 aa11.52□□□□□ -0.57
COL4A3-201ENST00000304990 CXCL14O95715 111 aa11.52□□□□□ -0.57
COL4A3-201ENST00000304990 ZSCAN20P17040 1043 aaPredicted RBP11.52□□□□□ -0.57
COL4A3-201ENST00000304990 ITGB5P18084 799 aa11.52□□□□□ -0.57
COL4A3-201ENST00000304990 TDGQ13569 410 aa11.52□□□□□ -0.57
COL4A3-201ENST00000304990 CYP2W1Q8TAV3 490 aa11.52□□□□□ -0.57
COL4A3-201ENST00000304990 ELAC1Q9H777 363 aaKnown RBP11.52□□□□□ -0.57
COL4A3-201ENST00000304990 PSTPIP2Q9H939 334 aa11.52□□□□□ -0.57
COL4A3-201ENST00000304990 JADE2Q9NQC1 790 aa11.52□□□□□ -0.57
COL4A3-201ENST00000304990 USTQ9Y2C2 406 aa11.52□□□□□ -0.57
COL4A3-201ENST00000304990 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.51□□□□□ -0.57
COL4A3-201ENST00000304990 MEIS2O14770 477 aa11.51□□□□□ -0.57
COL4A3-201ENST00000304990 BACH1O14867 736 aa11.51□□□□□ -0.57
COL4A3-201ENST00000304990 KRT37O76014 449 aa11.51□□□□□ -0.57
COL4A3-201ENST00000304990 EOMESO95936 686 aa11.51□□□□□ -0.57
COL4A3-201ENST00000304990 METAP2P50579 478 aaKnown RBP eCLIP11.51□□□□□ -0.57
COL4A3-201ENST00000304990 ACTR2P61160 394 aa11.51□□□□□ -0.57
COL4A3-201ENST00000304990 FAM160B1Q5W0V3 765 aa11.51□□□□□ -0.57
COL4A3-201ENST00000304990 KANK3Q6NY19 840 aa11.51□□□□□ -0.57
COL4A3-201ENST00000304990 ZC3H14Q6PJT7 736 aaKnown RBP11.51□□□□□ -0.57
COL4A3-201ENST00000304990 CCDC149Q6ZUS6 474 aa11.51□□□□□ -0.57
COL4A3-201ENST00000304990 OTOP3Q7RTS5 596 aa11.51□□□□□ -0.57
COL4A3-201ENST00000304990 PLPPR4Q7Z2D5 763 aa11.51□□□□□ -0.57
COL4A3-201ENST00000304990 RALYLQ86SE5 291 aaKnown RBP11.51□□□□□ -0.57
COL4A3-201ENST00000304990 CABP7Q86V35 215 aa11.51□□□□□ -0.57
COL4A3-201ENST00000304990 CTCFLQ8NI51 663 aaPredicted RBP11.51□□□□□ -0.57
COL4A3-201ENST00000304990 TMEM169Q96HH4 297 aa11.51□□□□□ -0.57
COL4A3-201ENST00000304990 PCYT2Q99447 389 aa11.51□□□□□ -0.57
COL4A3-201ENST00000304990 OSMRQ99650 979 aa11.51□□□□□ -0.57
COL4A3-201ENST00000304990 LNPKQ9C0E8 428 aa11.51□□□□□ -0.57
COL4A3-201ENST00000304990 CDHR5Q9HBB8 845 aa11.51□□□□□ -0.57
COL4A3-201ENST00000304990 UBIAD1Q9Y5Z9 338 aa11.51□□□□□ -0.57
COL4A3-201ENST00000304990 R4GN57 208 aa11.51□□□□□ -0.57
COL4A3-201ENST00000304990 DENND4AQ7Z401 1863 aa11.51□□□□□ -0.57
COL4A3-201ENST00000304990 CACNA1AO00555 2505 aa11.5□□□□□ -0.57
COL4A3-201ENST00000304990 HBP1O60381 514 aa11.5□□□□□ -0.57
COL4A3-201ENST00000304990 KIF5BP33176 963 aa11.5□□□□□ -0.57
COL4A3-201ENST00000304990 ALDH7A1P49419 539 aaKnown RBP11.5□□□□□ -0.57
COL4A3-201ENST00000304990 SLC26A2P50443 739 aa11.5□□□□□ -0.57
COL4A3-201ENST00000304990 CRYBB1P53674 252 aaPredicted RBP11.5□□□□□ -0.57
COL4A3-201ENST00000304990 UBE2SQ16763 222 aa11.5□□□□□ -0.57
COL4A3-201ENST00000304990 KIZQ2M2Z5 673 aa11.5□□□□□ -0.57
COL4A3-201ENST00000304990 TMC5Q6UXY8 1006 aa11.5□□□□□ -0.57
COL4A3-201ENST00000304990 LRRC55Q6ZSA7 311 aa11.5□□□□□ -0.57
COL4A3-201ENST00000304990 FAM228AQ86W67 206 aa11.5□□□□□ -0.57
COL4A3-201ENST00000304990 CKAP2LQ8IYA6 745 aa11.5□□□□□ -0.57
COL4A3-201ENST00000304990 METTL13Q8N6R0 699 aa11.5□□□□□ -0.57
COL4A3-201ENST00000304990 TMEM40Q8WWA1 233 aa11.5□□□□□ -0.57
COL4A3-201ENST00000304990 RIN2Q8WYP3 895 aaPredicted RBP11.5□□□□□ -0.57
COL4A3-201ENST00000304990 CASD1Q96PB1 797 aa11.5□□□□□ -0.57
COL4A3-201ENST00000304990 DUSP12Q9UNI6 340 aa11.5□□□□□ -0.57
COL4A3-201ENST00000304990 NT5C1B-RDH14C9J2C7 533 aa11.49□□□□□ -0.57
COL4A3-201ENST00000304990 DDX39AO00148 427 aaKnown RBP11.49□□□□□ -0.57
COL4A3-201ENST00000304990 CFHP08603 1231 aa11.49□□□□□ -0.57
COL4A3-201ENST00000304990 EPCAMP16422 314 aa11.49□□□□□ -0.57
COL4A3-201ENST00000304990 NPR3P17342 541 aa11.49□□□□□ -0.57
COL4A3-201ENST00000304990 FAM189BP81408 668 aa11.49□□□□□ -0.57
COL4A3-201ENST00000304990 TROAPQ12815 778 aa11.49□□□□□ -0.57
COL4A3-201ENST00000304990 GIT2Q14161 759 aa11.49□□□□□ -0.57
COL4A3-201ENST00000304990 NONOQ15233 471 aaKnown RBP eCLIP11.49□□□□□ -0.57
COL4A3-201ENST00000304990 ZNF484Q5JVG2 852 aa11.49□□□□□ -0.57
COL4A3-201ENST00000304990 SPECC1Q5M775 1068 aa11.49□□□□□ -0.57
COL4A3-201ENST00000304990 TRMT1LQ7Z2T5 733 aaKnown RBP11.49□□□□□ -0.57
COL4A3-201ENST00000304990 KIAA0319LQ8IZA0 1049 aa11.49□□□□□ -0.57
COL4A3-201ENST00000304990 VPS52Q8N1B4 723 aa11.49□□□□□ -0.57
COL4A3-201ENST00000304990 SLC39A11Q8N1S5 342 aa11.49□□□□□ -0.57
COL4A3-201ENST00000304990 RUBCNQ92622 972 aa11.49□□□□□ -0.57
COL4A3-201ENST00000304990 SCLT1Q96NL6 688 aa11.49□□□□□ -0.57
COL4A3-201ENST00000304990 CNTNAP3BQ96NU0 1288 aa11.49□□□□□ -0.57
COL4A3-201ENST00000304990 CNTNAP3Q9BZ76 1288 aa11.49□□□□□ -0.57
COL4A3-201ENST00000304990 SENP2Q9HC62 589 aa11.49□□□□□ -0.57
COL4A3-201ENST00000304990 KCNH7Q9NS40 1196 aa11.49□□□□□ -0.57
COL4A3-201ENST00000304990 PCDHA6Q9UN73 950 aa11.49□□□□□ -0.57
COL4A3-201ENST00000304990 PCDHA8Q9Y5H6 950 aa11.49□□□□□ -0.57
COL4A3-201ENST00000304990 COL1A2P08123 1366 aa11.49□□□□□ -0.57
COL4A3-201ENST00000304990 VTNP04004 478 aa11.48□□□□□ -0.57
COL4A3-201ENST00000304990 B4GALNT3Q6L9W6 998 aa11.48□□□□□ -0.57
COL4A3-201ENST00000304990 PDXDC2PQ6P474 469 aa11.48□□□□□ -0.57
COL4A3-201ENST00000304990 PPFIBP1Q86W92 1011 aa11.48□□□□□ -0.57
COL4A3-201ENST00000304990 ECHDC2Q86YB7 292 aa11.48□□□□□ -0.57
COL4A3-201ENST00000304990 NCOA7Q8NI08 942 aa11.48□□□□□ -0.57
COL4A3-201ENST00000304990 HELQQ8TDG4 1101 aa11.48□□□□□ -0.57
COL4A3-201ENST00000304990 AUTS2Q8WXX7 1259 aa11.48□□□□□ -0.57
COL4A3-201ENST00000304990 MXRA8Q9BRK3 442 aa11.48□□□□□ -0.57
COL4A3-201ENST00000304990 SPZ1Q9BXG8 430 aa11.48□□□□□ -0.57
COL4A3-201ENST00000304990 MRPL9Q9BYD2 267 aaKnown RBP11.48□□□□□ -0.57
COL4A3-201ENST00000304990 SFXN1Q9H9B4 322 aa11.48□□□□□ -0.57
COL4A3-201ENST00000304990 KCNK12Q9HB15 430 aa11.48□□□□□ -0.57
COL4A3-201ENST00000304990 ZNF302Q9NR11 478 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms