RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 JAMLQ86YT9 394 aa15.89■□□□□ 0.13
COL6A2-201ENST00000300527 RDH13Q8NBN7 331 aa15.89■□□□□ 0.13
COL6A2-201ENST00000300527 LRRC27Q9C0I9 530 aa15.89■□□□□ 0.13
COL6A2-201ENST00000300527 BTG4Q9NY30 223 aa15.89■□□□□ 0.13
COL6A2-201ENST00000300527 TNS2Q63HR2 1409 aa15.89■□□□□ 0.13
COL6A2-201ENST00000300527 RASGRF2O14827 1237 aa15.89■□□□□ 0.13
COL6A2-201ENST00000300527 LDHBP07195 334 aaKnown RBP15.89■□□□□ 0.13
COL6A2-201ENST00000300527 GHRP10912 638 aa15.89■□□□□ 0.13
COL6A2-201ENST00000300527 PON1P27169 355 aa15.89■□□□□ 0.13
COL6A2-201ENST00000300527 CYP4A11Q02928 519 aa15.89■□□□□ 0.13
COL6A2-201ENST00000300527 SEMA3FQ13275 785 aa15.89■□□□□ 0.13
COL6A2-201ENST00000300527 SEPT14Q6ZU15 432 aa15.89■□□□□ 0.13
COL6A2-201ENST00000300527 HOOK2Q96ED9 719 aa15.89■□□□□ 0.13
COL6A2-201ENST00000300527 CEP95Q96GE4 821 aa15.89■□□□□ 0.13
COL6A2-201ENST00000300527 ZNF317Q96PQ6 595 aaPredicted RBP15.89■□□□□ 0.13
COL6A2-201ENST00000300527 KRT16P08779 473 aa15.88■□□□□ 0.13
COL6A2-201ENST00000300527 EIF3BP55884 814 aaKnown RBP15.88■□□□□ 0.13
COL6A2-201ENST00000300527 PSMD2Q13200 908 aa15.88■□□□□ 0.13
COL6A2-201ENST00000300527 GRIK5Q16478 980 aa15.88■□□□□ 0.13
COL6A2-201ENST00000300527 SYCE1Q8N0S2 351 aa15.88■□□□□ 0.13
COL6A2-201ENST00000300527 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.88■□□□□ 0.132e-6■■■■■ 76.2
COL6A2-201ENST00000300527 MTMR9Q96QG7 549 aa15.88■□□□□ 0.13
COL6A2-201ENST00000300527 ERP44Q9BS26 406 aa15.88■□□□□ 0.13
COL6A2-201ENST00000300527 SRRM3A6NNA2 597 aaPredicted RBP15.88■□□□□ 0.13
COL6A2-201ENST00000300527 ZCWPW2Q504Y3 356 aa15.88■□□□□ 0.13
COL6A2-201ENST00000300527 FAM47EQ6ZV65 393 aa15.88■□□□□ 0.13
COL6A2-201ENST00000300527 CCDC105Q8IYK2 499 aa15.88■□□□□ 0.13
COL6A2-201ENST00000300527 ATP8B4Q8TF62 1192 aa15.88■□□□□ 0.13
COL6A2-201ENST00000300527 PABPC3Q9H361 631 aaKnown RBP15.88■□□□□ 0.13
COL6A2-201ENST00000300527 ABCB11O95342 1321 aa15.88■□□□□ 0.13
COL6A2-201ENST00000300527 IGSF9BQ9UPX0 1349 aa15.88■□□□□ 0.13
COL6A2-201ENST00000300527 H0Y3Z8 333 aa15.88■□□□□ 0.13
COL6A2-201ENST00000300527 GNA14O95837 355 aa15.88■□□□□ 0.13
COL6A2-201ENST00000300527 PAEPP09466 180 aa15.88■□□□□ 0.13
COL6A2-201ENST00000300527 RASA1P20936 1047 aa15.88■□□□□ 0.13
COL6A2-201ENST00000300527 KIAA1755Q5JYT7 1200 aa15.88■□□□□ 0.13
COL6A2-201ENST00000300527 CADPS2Q86UW7 1296 aa15.88■□□□□ 0.13
COL6A2-201ENST00000300527 TLCD1Q96CP7 247 aa15.88■□□□□ 0.13
COL6A2-201ENST00000300527 CEP63Q96MT8 703 aa15.88■□□□□ 0.13
COL6A2-201ENST00000300527 ZNF570Q96NI8 536 aa15.88■□□□□ 0.13
COL6A2-201ENST00000300527 ANKIB1Q9P2G1 1089 aa15.88■□□□□ 0.13
COL6A2-201ENST00000300527 PDHA1P08559 390 aa15.87■□□□□ 0.13
COL6A2-201ENST00000300527 LACTBP83111 547 aaPredicted RBP15.87■□□□□ 0.13
COL6A2-201ENST00000300527 TAF11Q15544 211 aa15.87■□□□□ 0.13
COL6A2-201ENST00000300527 TRIP13Q15645 432 aaPredicted RBP15.87■□□□□ 0.13
COL6A2-201ENST00000300527 PARP10Q53GL7 1025 aa15.87■□□□□ 0.13
COL6A2-201ENST00000300527 BARGINQ6ZT62 677 aa15.87■□□□□ 0.13
COL6A2-201ENST00000300527 SFR1Q86XK3 245 aa15.87■□□□□ 0.13
COL6A2-201ENST00000300527 ARMC2Q8NEN0 867 aa15.87■□□□□ 0.13
COL6A2-201ENST00000300527 ATXN2LQ8WWM7 1075 aaKnown RBP15.87■□□□□ 0.13
COL6A2-201ENST00000300527 P3H4Q92791 437 aa15.87■□□□□ 0.13
COL6A2-201ENST00000300527 CTTNBP2NLQ9P2B4 639 aa15.87■□□□□ 0.13
COL6A2-201ENST00000300527 MPHOSPH10O00566 681 aaKnown RBP15.87■□□□□ 0.13
COL6A2-201ENST00000300527 GCNT3O95395 438 aa15.87■□□□□ 0.13
COL6A2-201ENST00000300527 STAT1P42224 750 aa15.87■□□□□ 0.13
COL6A2-201ENST00000300527 NCALDP61601 193 aa15.87■□□□□ 0.13
COL6A2-201ENST00000300527 PICALMQ13492 652 aa15.87■□□□□ 0.13
COL6A2-201ENST00000300527 PLS1Q14651 629 aa15.87■□□□□ 0.13
COL6A2-201ENST00000300527 ZNF746Q6NUN9 644 aaPredicted RBP15.87■□□□□ 0.13
COL6A2-201ENST00000300527 ARHGEF26Q96DR7 871 aa15.87■□□□□ 0.13
COL6A2-201ENST00000300527 MTRF1LQ9UGC7 380 aaKnown RBP15.87■□□□□ 0.13
COL6A2-201ENST00000300527 RASAL2Q9UJF2 1139 aa15.87■□□□□ 0.13
COL6A2-201ENST00000300527 RNASELQ05823 741 aaKnown RBP15.87■□□□□ 0.13
COL6A2-201ENST00000300527 SNX1Q13596 522 aa15.87■□□□□ 0.13
COL6A2-201ENST00000300527 SBK1Q52WX2 424 aa15.87■□□□□ 0.13
COL6A2-201ENST00000300527 ARHGEF10LQ9HCE6 1279 aa15.87■□□□□ 0.13
COL6A2-201ENST00000300527 TAS2R14Q9NYV8 317 aa15.87■□□□□ 0.13
COL6A2-201ENST00000300527 SUCLA2Q9P2R7 463 aaPredicted RBP15.87■□□□□ 0.13
COL6A2-201ENST00000300527 CTNNAL1Q9UBT7 734 aa15.87■□□□□ 0.13
COL6A2-201ENST00000300527 CICQ96RK0 1608 aaPredicted RBP15.86■□□□□ 0.13
COL6A2-201ENST00000300527 PPFIA2O75334 1257 aa15.86■□□□□ 0.13
COL6A2-201ENST00000300527 MARCKSL1P49006 195 aa15.86■□□□□ 0.13
COL6A2-201ENST00000300527 CDK8P49336 464 aa15.86■□□□□ 0.13
COL6A2-201ENST00000300527 KCNA1Q09470 495 aa15.86■□□□□ 0.13
COL6A2-201ENST00000300527 MESDQ14696 234 aa15.86■□□□□ 0.13
COL6A2-201ENST00000300527 MRRFQ96E11 262 aaKnown RBP15.86■□□□□ 0.13
COL6A2-201ENST00000300527 MYH7BA7E2Y1 1941 aa15.86■□□□□ 0.13
COL6A2-201ENST00000300527 AKAP3O75969 853 aa15.86■□□□□ 0.13
COL6A2-201ENST00000300527 CAMTA2O94983 1202 aa15.86■□□□□ 0.13
COL6A2-201ENST00000300527 TNFAIP3P21580 790 aa15.86■□□□□ 0.13
COL6A2-201ENST00000300527 CALRP27797 417 aaKnown RBP15.86■□□□□ 0.13
COL6A2-201ENST00000300527 FXR2P51116 673 aaKnown RBP eCLIP15.86■□□□□ 0.13
COL6A2-201ENST00000300527 ATP11AP98196 1134 aa15.86■□□□□ 0.13
COL6A2-201ENST00000300527 DDX23Q9BUQ8 820 aaKnown RBP15.86■□□□□ 0.13
COL6A2-201ENST00000300527 FER1L4A9Z1Z3 1794 aa15.86■□□□□ 0.13
COL6A2-201ENST00000300527 RSPH10B2B2RC85 870 aa15.85■□□□□ 0.13
COL6A2-201ENST00000300527 USP17L15C9J2P7 530 aa15.85■□□□□ 0.13
COL6A2-201ENST00000300527 USP17L13C9JLJ4 530 aa15.85■□□□□ 0.13
COL6A2-201ENST00000300527 USP17L11C9JVI0 530 aa15.85■□□□□ 0.13
COL6A2-201ENST00000300527 USP17L18D6R9N7 530 aa15.85■□□□□ 0.13
COL6A2-201ENST00000300527 USP17L22D6RA61 530 aa15.85■□□□□ 0.13
COL6A2-201ENST00000300527 USP17L17D6RBQ6 530 aa15.85■□□□□ 0.13
COL6A2-201ENST00000300527 USP17L19D6RCP7 530 aa15.85■□□□□ 0.13
COL6A2-201ENST00000300527 USP17L20D6RJB6 530 aa15.85■□□□□ 0.13
COL6A2-201ENST00000300527 RTN2O75298 545 aa15.85■□□□□ 0.13
COL6A2-201ENST00000300527 SUN1O94901 812 aa15.85■□□□□ 0.13
COL6A2-201ENST00000300527 RSPH10BP0C881 870 aa15.85■□□□□ 0.13
COL6A2-201ENST00000300527 RPL21P46778 160 aaKnown RBP15.85■□□□□ 0.13
COL6A2-201ENST00000300527 USP17L24Q0WX57 530 aa15.85■□□□□ 0.13
COL6A2-201ENST00000300527 GNPTABQ3T906 1256 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms