RNA–Protein interactions for RNA: ENST00000295688.7

CCT3-201, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT3, Length 2,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-201ENST00000295688 PRR16Q569H4 304 aa16.13■□□□□ 0.17
CCT3-201ENST00000295688 PTF1AQ7RTS3 328 aa16.13■□□□□ 0.17
CCT3-201ENST00000295688 CRAMP1Q96RY5 1269 aa16.13■□□□□ 0.17
CCT3-201ENST00000295688 MKNK1Q9BUB5 465 aa16.13■□□□□ 0.17
CCT3-201ENST00000295688 CNOT10Q9H9A5 744 aaKnown RBP16.13■□□□□ 0.17
CCT3-201ENST00000295688 PPANQ9NQ55 473 aaKnown RBP16.13■□□□□ 0.17
CCT3-201ENST00000295688 NYAP2Q9P242 653 aa16.13■□□□□ 0.17
CCT3-201ENST00000295688 SLC12A6Q9UHW9 1150 aa16.13■□□□□ 0.17
CCT3-201ENST00000295688 ASTN1O14525 1302 aa16.12■□□□□ 0.17
CCT3-201ENST00000295688 MYO1FO00160 1098 aa16.12■□□□□ 0.17
CCT3-201ENST00000295688 MEIS2O14770 477 aa16.12■□□□□ 0.17
CCT3-201ENST00000295688 DAPK3O43293 454 aa16.12■□□□□ 0.17
CCT3-201ENST00000295688 GCNT3O95395 438 aa16.12■□□□□ 0.17
CCT3-201ENST00000295688 TMEM253P0C7T8 217 aa16.12■□□□□ 0.17
CCT3-201ENST00000295688 PSMC2P35998 433 aaKnown RBP16.12■□□□□ 0.17
CCT3-201ENST00000295688 GALCP54803 685 aa16.12■□□□□ 0.17
CCT3-201ENST00000295688 PSMC6P62333 389 aa16.12■□□□□ 0.17
CCT3-201ENST00000295688 ACTN3Q08043 901 aaPredicted RBP16.12■□□□□ 0.17
CCT3-201ENST00000295688 CCDC121Q6ZUS5 278 aa16.12■□□□□ 0.17
CCT3-201ENST00000295688 TMC3Q7Z5M5 1100 aa16.12■□□□□ 0.17
CCT3-201ENST00000295688 AMIGO3Q86WK7 504 aa16.12■□□□□ 0.17
CCT3-201ENST00000295688 DDX42Q86XP3 938 aaKnown RBP eCLIP16.12■□□□□ 0.17
CCT3-201ENST00000295688 SLC30A5Q8TAD4 765 aa16.12■□□□□ 0.17
CCT3-201ENST00000295688 RFFLQ8WZ73 363 aa16.12■□□□□ 0.17
CCT3-201ENST00000295688 CYFIP2Q96F07 1278 aa16.12■□□□□ 0.17
CCT3-201ENST00000295688 AMNQ9BXJ7 453 aa16.12■□□□□ 0.17
CCT3-201ENST00000295688 STK33Q9BYT3 514 aa16.12■□□□□ 0.17
CCT3-201ENST00000295688 VCPKMTQ9H867 229 aa16.12■□□□□ 0.17
CCT3-201ENST00000295688 AMACRQ9UHK6 382 aa16.12■□□□□ 0.17
CCT3-201ENST00000295688 GOLGA6L10A0A0M3HER8 536 aa16.11■□□□□ 0.17
CCT3-201ENST00000295688 GOLGA6L7A0A1B0GV03 622 aa16.11■□□□□ 0.17
CCT3-201ENST00000295688 SPDYE3A6NKU9 549 aa16.11■□□□□ 0.17
CCT3-201ENST00000295688 TRAPPC3O43617 180 aa16.11■□□□□ 0.17
CCT3-201ENST00000295688 TRIM37O94972 964 aa16.11■□□□□ 0.17
CCT3-201ENST00000295688 SOX5P35711 763 aa16.11■□□□□ 0.17
CCT3-201ENST00000295688 CTNNBL1Q8WYA6 563 aaPredicted RBP16.11■□□□□ 0.17
CCT3-201ENST00000295688 P3H4Q92791 437 aa16.11■□□□□ 0.17
CCT3-201ENST00000295688 GOLPH3Q9H4A6 298 aa16.11■□□□□ 0.17
CCT3-201ENST00000295688 BCCIPQ9P287 314 aaKnown RBP eCLIP16.11■□□□□ 0.17
CCT3-201ENST00000295688 FAM187AA6NFU0 413 aa16.11■□□□□ 0.17
CCT3-201ENST00000295688 CIITAP33076 1130 aa16.11■□□□□ 0.17
CCT3-201ENST00000295688 SREBF1P36956 1147 aa16.11■□□□□ 0.17
CCT3-201ENST00000295688 IFT88Q13099 833 aa16.11■□□□□ 0.17
CCT3-201ENST00000295688 SLC15A2Q16348 729 aa16.11■□□□□ 0.17
CCT3-201ENST00000295688 SLFN13Q68D06 897 aa16.11■□□□□ 0.17
CCT3-201ENST00000295688 HHIPL2Q6UWX4 724 aa16.11■□□□□ 0.17
CCT3-201ENST00000295688 CARD9Q9H257 536 aa16.11■□□□□ 0.17
CCT3-201ENST00000295688 NEUROG2Q9H2A3 272 aa16.11■□□□□ 0.17
CCT3-201ENST00000295688 RABGAP1Q9Y3P9 1069 aa16.11■□□□□ 0.17
CCT3-201ENST00000295688 LY75O60449 1722 aa16.11■□□□□ 0.17
CCT3-201ENST00000295688 UBE4BO95155 1302 aa16.1■□□□□ 0.17
CCT3-201ENST00000295688 MEIS1O00470 390 aa16.1■□□□□ 0.17
CCT3-201ENST00000295688 TTI1O43156 1089 aa16.1■□□□□ 0.17
CCT3-201ENST00000295688 SMTNP53814 917 aa16.1■□□□□ 0.17
CCT3-201ENST00000295688 DHX9Q08211 1270 aaKnown RBP16.1■□□□□ 0.17
CCT3-201ENST00000295688 STXBP4Q6ZWJ1 553 aa16.1■□□□□ 0.17
CCT3-201ENST00000295688 CROCCP2Q86T23 111 aa16.1■□□□□ 0.17
CCT3-201ENST00000295688 HOOK3Q86VS8 718 aa16.1■□□□□ 0.17
CCT3-201ENST00000295688 TEX2Q8IWB9 1127 aa16.1■□□□□ 0.17
CCT3-201ENST00000295688 FAM186BQ8IYM0 893 aa16.1■□□□□ 0.17
CCT3-201ENST00000295688 OR2W6PQ8NHA6 318 aa16.1■□□□□ 0.17
CCT3-201ENST00000295688 BORCS6Q96GS4 357 aa16.1■□□□□ 0.17
CCT3-201ENST00000295688 NOVA2Q9UNW9 492 aaKnown RBP16.1■□□□□ 0.17
CCT3-201ENST00000295688 PCDHB13Q9Y5F0 798 aa16.1■□□□□ 0.17
CCT3-201ENST00000295688 C5orf60A6NFR6 353 aa16.1■□□□□ 0.17
CCT3-201ENST00000295688 EVI5O60447 810 aa16.1■□□□□ 0.17
CCT3-201ENST00000295688 PPFIA2O75334 1257 aa16.1■□□□□ 0.17
CCT3-201ENST00000295688 SERPINB2P05120 415 aa16.1■□□□□ 0.17
CCT3-201ENST00000295688 ITGA4P13612 1032 aa16.1■□□□□ 0.17
CCT3-201ENST00000295688 CASP4P49662 377 aa16.1■□□□□ 0.17
CCT3-201ENST00000295688 MMP14P50281 582 aa16.1■□□□□ 0.17
CCT3-201ENST00000295688 PTENP60484 403 aa16.1■□□□□ 0.17
CCT3-201ENST00000295688 POU5F1Q01860 360 aaKnown RBP16.1■□□□□ 0.17
CCT3-201ENST00000295688 IFFO1Q0D2I5 559 aa16.1■□□□□ 0.17
CCT3-201ENST00000295688 KRT71Q3SY84 523 aa16.1■□□□□ 0.17
CCT3-201ENST00000295688 FAM196AQ6ZSG2 479 aa16.1■□□□□ 0.17
CCT3-201ENST00000295688 TAX1BP1Q86VP1 789 aa16.1■□□□□ 0.17
CCT3-201ENST00000295688 SP8Q8IXZ3 490 aa16.1■□□□□ 0.17
CCT3-201ENST00000295688 CENPTQ96BT3 561 aa16.1■□□□□ 0.17
CCT3-201ENST00000295688 UIMC1Q96RL1 719 aa16.1■□□□□ 0.17
CCT3-201ENST00000295688 FMO2Q99518 471 aa16.1■□□□□ 0.17
CCT3-201ENST00000295688 F8VZ95 297 aa16.09■□□□□ 0.17
CCT3-201ENST00000295688 RASSF9O75901 435 aa16.09■□□□□ 0.17
CCT3-201ENST00000295688 FAM13AO94988 1023 aa16.09■□□□□ 0.17
CCT3-201ENST00000295688 FGGP02679 453 aa16.09■□□□□ 0.17
CCT3-201ENST00000295688 GBP1P32455 592 aa16.09■□□□□ 0.17
CCT3-201ENST00000295688 PPATQ06203 517 aa16.09■□□□□ 0.17
CCT3-201ENST00000295688 DHX34Q14147 1143 aaKnown RBP16.09■□□□□ 0.17
CCT3-201ENST00000295688 FBXO11Q86XK2 927 aa16.09■□□□□ 0.17
CCT3-201ENST00000295688 LNX1Q8TBB1 728 aaPredicted RBP16.09■□□□□ 0.17
CCT3-201ENST00000295688 SLC35G2Q8TBE7 412 aa16.09■□□□□ 0.17
CCT3-201ENST00000295688 VTI1AQ96AJ9 217 aa16.09■□□□□ 0.17
CCT3-201ENST00000295688 PSMD1Q99460 953 aa16.09■□□□□ 0.17
CCT3-201ENST00000295688 BHMT2Q9H2M3 363 aa16.09■□□□□ 0.17
CCT3-201ENST00000295688 SEL1LQ9UBV2 794 aa16.09■□□□□ 0.17
CCT3-201ENST00000295688 F8W031 263 aaPredicted RBP16.09■□□□□ 0.17
CCT3-201ENST00000295688 CLIC2O15247 247 aa16.09■□□□□ 0.17
CCT3-201ENST00000295688 BUB1BO60566 1050 aaPredicted RBP16.09■□□□□ 0.17
CCT3-201ENST00000295688 CYP3A4P08684 503 aa16.09■□□□□ 0.17
CCT3-201ENST00000295688 HSPA6P17066 643 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms