RNA–Protein interactions for RNA: ENST00000274255.10

SKP2-202, Transcript of S-phase kinase associated protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKP2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-202ENST00000274255 SPATA31D1Q6ZQQ2 1576 aa12.34□□□□□ -0.43
SKP2-202ENST00000274255 IRX4P78413 519 aa12.34□□□□□ -0.43
SKP2-202ENST00000274255 MYL7Q01449 175 aa12.34□□□□□ -0.43
SKP2-202ENST00000274255 MTMR3Q13615 1198 aa12.34□□□□□ -0.43
SKP2-202ENST00000274255 CHADLQ6NUI6 762 aa12.34□□□□□ -0.43
SKP2-202ENST00000274255 PRUNE1Q86TP1 453 aa12.34□□□□□ -0.43
SKP2-202ENST00000274255 FBXO11Q86XK2 927 aa12.34□□□□□ -0.43
SKP2-202ENST00000274255 PRCCQ92733 491 aaPredicted RBP12.34□□□□□ -0.43
SKP2-202ENST00000274255 THAP2Q9H0W7 228 aa12.34□□□□□ -0.43
SKP2-202ENST00000274255 SEMA4AQ9H3S1 761 aa12.34□□□□□ -0.43
SKP2-202ENST00000274255 NAGPAQ9UK23 515 aa12.34□□□□□ -0.43
SKP2-202ENST00000274255 SUFUQ9UMX1 484 aa12.34□□□□□ -0.43
SKP2-202ENST00000274255 PI4K2BG5E9Z4 385 aa12.33□□□□□ -0.43
SKP2-202ENST00000274255 TTLL1O95922 423 aa12.33□□□□□ -0.43
SKP2-202ENST00000274255 NAB2Q15742 525 aa12.33□□□□□ -0.43
SKP2-202ENST00000274255 CENPPQ6IPU0 288 aa12.33□□□□□ -0.43
SKP2-202ENST00000274255 ACSF2Q96CM8 615 aaPredicted RBP12.33□□□□□ -0.43
SKP2-202ENST00000274255 DYDC2Q96IM9 177 aa12.33□□□□□ -0.43
SKP2-202ENST00000274255 LZTS2Q9BRK4 669 aa12.33□□□□□ -0.43
SKP2-202ENST00000274255 DDX23Q9BUQ8 820 aaKnown RBP12.33□□□□□ -0.43
SKP2-202ENST00000274255 NEUROG2Q9H2A3 272 aa12.33□□□□□ -0.43
SKP2-202ENST00000274255 SWAP70Q9UH65 585 aa12.33□□□□□ -0.43
SKP2-202ENST00000274255 DDX20Q9UHI6 824 aaKnown RBP12.33□□□□□ -0.43
SKP2-202ENST00000274255 RASSF10A6NK89 507 aa12.33□□□□□ -0.44
SKP2-202ENST00000274255 LAD1O00515 517 aa12.33□□□□□ -0.44
SKP2-202ENST00000274255 TLR2O60603 784 aa12.33□□□□□ -0.44
SKP2-202ENST00000274255 AKAP3O75969 853 aa12.33□□□□□ -0.44
SKP2-202ENST00000274255 ARHGAP4P98171 946 aa12.33□□□□□ -0.44
SKP2-202ENST00000274255 KYNUQ16719 465 aa12.33□□□□□ -0.44
SKP2-202ENST00000274255 SGO2Q562F6 1265 aa12.33□□□□□ -0.44
SKP2-202ENST00000274255 SYCE1Q8N0S2 351 aa12.33□□□□□ -0.44
SKP2-202ENST00000274255 RNF25Q96BH1 459 aaPredicted RBP12.33□□□□□ -0.44
SKP2-202ENST00000274255 MMTAG2Q9BU76 263 aaKnown RBP12.33□□□□□ -0.44
SKP2-202ENST00000274255 F5H423 210 aaPredicted RBP12.33□□□□□ -0.44
SKP2-202ENST00000274255 LGR5O75473 907 aa12.33□□□□□ -0.44
SKP2-202ENST00000274255 TNNI1P19237 187 aa12.33□□□□□ -0.44
SKP2-202ENST00000274255 PMS2P54278 862 aa12.33□□□□□ -0.44
SKP2-202ENST00000274255 GPSM2P81274 684 aa12.33□□□□□ -0.44
SKP2-202ENST00000274255 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.33□□□□□ -0.44
SKP2-202ENST00000274255 NUCKS1Q9H1E3 243 aaKnown RBP12.33□□□□□ -0.44
SKP2-202ENST00000274255 DHX36Q9H2U1 1008 aaKnown RBP12.33□□□□□ -0.44
SKP2-202ENST00000274255 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.32□□□□□ -0.44
SKP2-202ENST00000274255 TMEM150BA6NC51 233 aa12.32□□□□□ -0.44
SKP2-202ENST00000274255 CLDN3O15551 220 aa12.32□□□□□ -0.44
SKP2-202ENST00000274255 KNOP1Q1ED39 458 aaKnown RBP12.32□□□□□ -0.44
SKP2-202ENST00000274255 C10orf76Q5T2E6 689 aa12.32□□□□□ -0.44
SKP2-202ENST00000274255 SCFD1Q8WVM8 642 aa12.32□□□□□ -0.44
SKP2-202ENST00000274255 ARHGEF1Q92888 912 aaKnown RBP12.32□□□□□ -0.44
SKP2-202ENST00000274255 ZNF512BQ96KM6 892 aaPredicted RBP12.32□□□□□ -0.44
SKP2-202ENST00000274255 TAS2R14Q9NYV8 317 aa12.32□□□□□ -0.44
SKP2-202ENST00000274255 PPP1R9AQ9ULJ8 1098 aa12.32□□□□□ -0.44
SKP2-202ENST00000274255 ZNF148Q9UQR1 794 aa12.32□□□□□ -0.44
SKP2-202ENST00000274255 RIMBP3CA6NJZ7 1639 aa12.32□□□□□ -0.44
SKP2-202ENST00000274255 RIMBP3BA6NNM3 1639 aa12.32□□□□□ -0.44
SKP2-202ENST00000274255 RIMBP3Q9UFD9 1639 aa12.32□□□□□ -0.44
SKP2-202ENST00000274255 TESPA1A2RU30 521 aaPredicted RBP12.32□□□□□ -0.44
SKP2-202ENST00000274255 MYCNP04198 464 aaPredicted RBP12.32□□□□□ -0.44
SKP2-202ENST00000274255 NFIAQ12857 509 aa12.32□□□□□ -0.44
SKP2-202ENST00000274255 SETDB1Q15047 1291 aa12.32□□□□□ -0.44
SKP2-202ENST00000274255 CYB5D1Q6P9G0 228 aa12.32□□□□□ -0.44
SKP2-202ENST00000274255 LINC00116Q8NCU8 138 aa12.32□□□□□ -0.44
SKP2-202ENST00000274255 TNFRSF25Q93038 417 aa12.32□□□□□ -0.44
SKP2-202ENST00000274255 CHMP6Q96FZ7 201 aa12.32□□□□□ -0.44
SKP2-202ENST00000274255 SIK3Q9Y2K2 1263 aa12.32□□□□□ -0.44
SKP2-202ENST00000274255 PCDHAC2Q9Y5I4 1007 aa12.32□□□□□ -0.44
SKP2-202ENST00000274255 CYP26A1O43174 497 aa12.32□□□□□ -0.44
SKP2-202ENST00000274255 FAM107AO95990 144 aa12.32□□□□□ -0.44
SKP2-202ENST00000274255 ATP11AP98196 1134 aa12.32□□□□□ -0.44
SKP2-202ENST00000274255 BSPRYQ5W0U4 402 aa12.32□□□□□ -0.44
SKP2-202ENST00000274255 GALNT17Q6IS24 598 aa12.32□□□□□ -0.44
SKP2-202ENST00000274255 CCDC137Q6PK04 289 aaKnown RBP12.32□□□□□ -0.44
SKP2-202ENST00000274255 RPUSD2Q8IZ73 545 aaKnown RBP12.32□□□□□ -0.44
SKP2-202ENST00000274255 C4orf32Q8N8J7 132 aa12.32□□□□□ -0.44
SKP2-202ENST00000274255 SLC20A1Q8WUM9 679 aa12.32□□□□□ -0.44
SKP2-202ENST00000274255 JMJD4Q9H9V9 463 aa12.32□□□□□ -0.44
SKP2-202ENST00000274255 TPX2Q9ULW0 747 aaKnown RBP12.32□□□□□ -0.44
SKP2-202ENST00000274255 MAGED2Q9UNF1 606 aaPredicted RBP12.32□□□□□ -0.44
SKP2-202ENST00000274255 XRN1Q8IZH2 1706 aaKnown RBP12.31□□□□□ -0.44
SKP2-202ENST00000274255 PVALEFA0A1B0GWK0 134 aa12.31□□□□□ -0.44
SKP2-202ENST00000274255 CCDC160A6NGH7 325 aa12.31□□□□□ -0.44
SKP2-202ENST00000274255 GH2P01242 217 aa12.31□□□□□ -0.44
SKP2-202ENST00000274255 ALAS1P13196 640 aa12.31□□□□□ -0.44
SKP2-202ENST00000274255 PAX7P23759 505 aa12.31□□□□□ -0.44
SKP2-202ENST00000274255 MARCKSL1P49006 195 aa12.31□□□□□ -0.44
SKP2-202ENST00000274255 MEA1Q16626 185 aa12.31□□□□□ -0.44
SKP2-202ENST00000274255 SLC35G1Q2M3R5 365 aa12.31□□□□□ -0.44
SKP2-202ENST00000274255 GNPTABQ3T906 1256 aa12.31□□□□□ -0.44
SKP2-202ENST00000274255 HIPK4Q8NE63 616 aa12.31□□□□□ -0.44
SKP2-202ENST00000274255 SPDL1Q96EA4 605 aa12.31□□□□□ -0.44
SKP2-202ENST00000274255 STAMBPL1Q96FJ0 436 aa12.31□□□□□ -0.44
SKP2-202ENST00000274255 PI4K2AQ9BTU6 479 aa12.31□□□□□ -0.44
SKP2-202ENST00000274255 KIFC3Q9BVG8 833 aa12.31□□□□□ -0.44
SKP2-202ENST00000274255 RUSC1Q9BVN2 902 aa12.31□□□□□ -0.44
SKP2-202ENST00000274255 SYNCQ9H7C4 482 aa12.31□□□□□ -0.44
SKP2-202ENST00000274255 TMOD2Q9NZR1 351 aa12.31□□□□□ -0.44
SKP2-202ENST00000274255 KLHL14Q9P2G3 628 aa12.31□□□□□ -0.44
SKP2-202ENST00000274255 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.31□□□□□ -0.44
SKP2-202ENST00000274255 TRIM33Q9UPN9 1127 aa12.31□□□□□ -0.44
SKP2-202ENST00000274255 PNMA6FA0A0J9YX94 578 aa12.31□□□□□ -0.44
SKP2-202ENST00000274255 RAD17O75943 681 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms