RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 HMGCRP04035 888 aa16.96■□□□□ 0.3
COPS3-201ENST00000268717 PSAPP07602 524 aa16.96■□□□□ 0.3
COPS3-201ENST00000268717 EN2P19622 333 aaPredicted RBP16.96■□□□□ 0.3
COPS3-201ENST00000268717 YWHABP31946 246 aaKnown RBP16.96■□□□□ 0.3
COPS3-201ENST00000268717 DNM2P50570 870 aa16.96■□□□□ 0.3
COPS3-201ENST00000268717 MARSP56192 900 aaKnown RBP16.96■□□□□ 0.3
COPS3-201ENST00000268717 RAD51AP2Q09MP3 1159 aa16.96■□□□□ 0.3
COPS3-201ENST00000268717 MAP2K5Q13163 448 aa16.96■□□□□ 0.3
COPS3-201ENST00000268717 KCTD2Q14681 263 aa16.96■□□□□ 0.3
COPS3-201ENST00000268717 STXBP4Q6ZWJ1 553 aa16.96■□□□□ 0.3
COPS3-201ENST00000268717 GLIS3Q8NEA6 775 aa16.96■□□□□ 0.3
COPS3-201ENST00000268717 ZNF507Q8TCN5 953 aa16.96■□□□□ 0.3
COPS3-201ENST00000268717 MORC4Q8TE76 937 aa16.96■□□□□ 0.3
COPS3-201ENST00000268717 TRIB2Q92519 343 aa16.96■□□□□ 0.3
COPS3-201ENST00000268717 APBA2Q99767 749 aa16.96■□□□□ 0.3
COPS3-201ENST00000268717 TUBGCP2Q9BSJ2 902 aa16.96■□□□□ 0.3
COPS3-201ENST00000268717 TAB2Q9NYJ8 693 aa16.96■□□□□ 0.3
COPS3-201ENST00000268717 PDXKO00764 312 aa16.95■□□□□ 0.3
COPS3-201ENST00000268717 SKILP12757 684 aa16.95■□□□□ 0.3
COPS3-201ENST00000268717 ARID5BQ14865 1188 aa16.95■□□□□ 0.3
COPS3-201ENST00000268717 LRRC41Q15345 812 aa16.95■□□□□ 0.3
COPS3-201ENST00000268717 NFIL3Q16649 462 aa16.95■□□□□ 0.3
COPS3-201ENST00000268717 KNOP1Q1ED39 458 aaKnown RBP16.95■□□□□ 0.3
COPS3-201ENST00000268717 KCNV1Q6PIU1 500 aa16.95■□□□□ 0.3
COPS3-201ENST00000268717 PADI6Q6TGC4 694 aa16.95■□□□□ 0.3
COPS3-201ENST00000268717 IQCDQ96DY2 449 aa16.95■□□□□ 0.3
COPS3-201ENST00000268717 MMP19Q99542 508 aa16.95■□□□□ 0.3
COPS3-201ENST00000268717 RNF208Q9H0X6 261 aa16.95■□□□□ 0.3
COPS3-201ENST00000268717 UNC93B1Q9H1C4 597 aa16.95■□□□□ 0.3
COPS3-201ENST00000268717 VPS16Q9H269 839 aa16.95■□□□□ 0.3
COPS3-201ENST00000268717 TMX1Q9H3N1 280 aa16.95■□□□□ 0.3
COPS3-201ENST00000268717 ZHX3Q9H4I2 956 aa16.95■□□□□ 0.3
COPS3-201ENST00000268717 RSPH10B2B2RC85 870 aa16.94■□□□□ 0.3
COPS3-201ENST00000268717 ZBTB39O15060 712 aa16.94■□□□□ 0.3
COPS3-201ENST00000268717 ATG7O95352 703 aa16.94■□□□□ 0.3
COPS3-201ENST00000268717 RSPH10BP0C881 870 aa16.94■□□□□ 0.3
COPS3-201ENST00000268717 ALCAMQ13740 583 aa16.94■□□□□ 0.3
COPS3-201ENST00000268717 NOLC1Q14978 699 aaKnown RBP eCLIP16.94■□□□□ 0.3
COPS3-201ENST00000268717 MIS18BP1Q6P0N0 1132 aa16.94■□□□□ 0.3
COPS3-201ENST00000268717 ABHD15Q6UXT9 468 aa16.94■□□□□ 0.3
COPS3-201ENST00000268717 OTUD6AQ7L8S5 288 aa16.94■□□□□ 0.3
COPS3-201ENST00000268717 ABRAQ8N0Z2 381 aa16.94■□□□□ 0.3
COPS3-201ENST00000268717 SLC17A8Q8NDX2 589 aa16.94■□□□□ 0.3
COPS3-201ENST00000268717 CCDC51Q96ER9 411 aa16.94■□□□□ 0.3
COPS3-201ENST00000268717 FGFBP2Q9BYJ0 223 aa16.94■□□□□ 0.3
COPS3-201ENST00000268717 MRPL44Q9H9J2 332 aaKnown RBP16.94■□□□□ 0.3
COPS3-201ENST00000268717 STRNO43815 780 aa16.93■□□□□ 0.3
COPS3-201ENST00000268717 GJB1P08034 283 aa16.93■□□□□ 0.3
COPS3-201ENST00000268717 TPM1P09493 284 aa16.93■□□□□ 0.3
COPS3-201ENST00000268717 HOXC6P09630 235 aa16.93■□□□□ 0.3
COPS3-201ENST00000268717 MTIF2P46199 727 aaKnown RBP16.93■□□□□ 0.3
COPS3-201ENST00000268717 ACTR2P61160 394 aa16.93■□□□□ 0.3
COPS3-201ENST00000268717 TRIM32Q13049 653 aa16.93■□□□□ 0.3
COPS3-201ENST00000268717 MAPK7Q13164 816 aa16.93■□□□□ 0.3
COPS3-201ENST00000268717 NEDD9Q14511 834 aa16.93■□□□□ 0.3
COPS3-201ENST00000268717 UGCGQ16739 394 aa16.93■□□□□ 0.3
COPS3-201ENST00000268717 PPFIBP1Q86W92 1011 aa16.93■□□□□ 0.3
COPS3-201ENST00000268717 CNGA4Q8IV77 575 aa16.93■□□□□ 0.3
COPS3-201ENST00000268717 MYCT1Q8N699 235 aa16.93■□□□□ 0.3
COPS3-201ENST00000268717 CCDC43Q96MW1 224 aaKnown RBP16.93■□□□□ 0.3
COPS3-201ENST00000268717 PANX2Q96RD6 677 aa16.93■□□□□ 0.3
COPS3-201ENST00000268717 FIZ1Q96SL8 496 aa16.93■□□□□ 0.3
COPS3-201ENST00000268717 TYW1Q9NV66 732 aaKnown RBP16.93■□□□□ 0.3
COPS3-201ENST00000268717 TBC1D7Q9P0N9 293 aa16.93■□□□□ 0.3
COPS3-201ENST00000268717 PLXNA1Q9UIW2 1896 aa16.93■□□□□ 0.3
COPS3-201ENST00000268717 IGSF9BQ9UPX0 1349 aa16.93■□□□□ 0.3
COPS3-201ENST00000268717 AKR1B15C9JRZ8 316 aaPredicted RBP16.92■□□□□ 0.3
COPS3-201ENST00000268717 CALUO43852 315 aaPredicted RBP16.92■□□□□ 0.3
COPS3-201ENST00000268717 CASP5P51878 434 aa16.92■□□□□ 0.3
COPS3-201ENST00000268717 UBXN1Q04323 297 aa16.92■□□□□ 0.3
COPS3-201ENST00000268717 CCL14Q16627 93 aa16.92■□□□□ 0.3
COPS3-201ENST00000268717 MAN2A1Q16706 1144 aa16.92■□□□□ 0.3
COPS3-201ENST00000268717 TC2NQ8N9U0 490 aa16.92■□□□□ 0.3
COPS3-201ENST00000268717 FGD4Q96M96 766 aa16.92■□□□□ 0.3
COPS3-201ENST00000268717 DRC1Q96MC2 740 aa16.92■□□□□ 0.3
COPS3-201ENST00000268717 LARSQ9P2J5 1176 aaKnown RBP16.92■□□□□ 0.3
COPS3-201ENST00000268717 HIP1RO75146 1068 aa16.92■□□□□ 0.3
COPS3-201ENST00000268717 GCNT3O95395 438 aa16.92■□□□□ 0.3
COPS3-201ENST00000268717 SUPT20HL2P0C7V6 817 aa16.92■□□□□ 0.3
COPS3-201ENST00000268717 MYBP10242 640 aa16.92■□□□□ 0.3
COPS3-201ENST00000268717 PRKCSHP14314 528 aaPredicted RBP16.92■□□□□ 0.3
COPS3-201ENST00000268717 ADORA2AP29274 412 aa16.92■□□□□ 0.3
COPS3-201ENST00000268717 GJA8P48165 433 aa16.92■□□□□ 0.3
COPS3-201ENST00000268717 MIIPQ5JXC2 388 aa16.92■□□□□ 0.3
COPS3-201ENST00000268717 MAP3K21Q5TCX8 1036 aa16.92■□□□□ 0.3
COPS3-201ENST00000268717 ZNF720Q7Z2F6 126 aa16.92■□□□□ 0.3
COPS3-201ENST00000268717 FAM178BQ8IXR5 827 aa16.92■□□□□ 0.3
COPS3-201ENST00000268717 DAW1Q8N136 415 aa16.92■□□□□ 0.3
COPS3-201ENST00000268717 RETREG2Q8NC44 543 aa16.92■□□□□ 0.3
COPS3-201ENST00000268717 ERGIC2Q96RQ1 377 aa16.92■□□□□ 0.3
COPS3-201ENST00000268717 NOC4LQ9BVI4 516 aaKnown RBP16.92■□□□□ 0.3
COPS3-201ENST00000268717 STRA6Q9BX79 667 aa16.92■□□□□ 0.3
COPS3-201ENST00000268717 NAA15Q9BXJ9 866 aaKnown RBP16.92■□□□□ 0.3
COPS3-201ENST00000268717 ST6GALNAC4Q9H4F1 302 aa16.92■□□□□ 0.3
COPS3-201ENST00000268717 PAK6Q9NQU5 681 aaPredicted RBP16.92■□□□□ 0.3
COPS3-201ENST00000268717 GABBR1Q9UBS5 961 aa16.92■□□□□ 0.3
COPS3-201ENST00000268717 PCDHB13Q9Y5F0 798 aa16.92■□□□□ 0.3
COPS3-201ENST00000268717 LRRC37A2A6NM11 1700 aa16.91■□□□□ 0.3
COPS3-201ENST00000268717 IGKV6D-21A0A0A0MT36 114 aa16.91■□□□□ 0.3
COPS3-201ENST00000268717 ASB14A6NK59 587 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms