RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 NCANO14594 1321 aa13.42□□□□□ -0.26
CHMP2B-201ENST00000263780 SLC37A4O43826 429 aa13.42□□□□□ -0.26
CHMP2B-201ENST00000263780 CALUO43852 315 aaPredicted RBP13.42□□□□□ -0.26
CHMP2B-201ENST00000263780 CAMTA2O94983 1202 aa13.42□□□□□ -0.26
CHMP2B-201ENST00000263780 BAG3O95817 575 aa13.42□□□□□ -0.26
CHMP2B-201ENST00000263780 SHBGP04278 402 aa13.42□□□□□ -0.26
CHMP2B-201ENST00000263780 TMEM253P0C7T8 217 aa13.42□□□□□ -0.26
CHMP2B-201ENST00000263780 SLC9A1P19634 815 aa13.42□□□□□ -0.26
CHMP2B-201ENST00000263780 ATP5DP30049 168 aa13.42□□□□□ -0.26
CHMP2B-201ENST00000263780 STAT1P42224 750 aa13.42□□□□□ -0.26
CHMP2B-201ENST00000263780 PLTPP55058 493 aa13.42□□□□□ -0.26
CHMP2B-201ENST00000263780 GSTO1P78417 241 aa13.42□□□□□ -0.26
CHMP2B-201ENST00000263780 NAIF1Q69YI7 327 aaPredicted RBP13.42□□□□□ -0.26
CHMP2B-201ENST00000263780 U2AF1L4Q8WU68 220 aaKnown RBP13.42□□□□□ -0.26
CHMP2B-201ENST00000263780 DYDC1Q8WWB3 177 aa13.42□□□□□ -0.26
CHMP2B-201ENST00000263780 KLHL29Q96CT2 875 aa13.42□□□□□ -0.26
CHMP2B-201ENST00000263780 EPB41L4BQ9H329 900 aa13.42□□□□□ -0.26
CHMP2B-201ENST00000263780 TRAF3IP3Q9Y228 551 aa13.42□□□□□ -0.26
CHMP2B-201ENST00000263780 PITPNM2Q9BZ72 1349 aa13.42□□□□□ -0.26
CHMP2B-201ENST00000263780 KIAA1551Q9HCM1 1747 aa13.42□□□□□ -0.26
CHMP2B-201ENST00000263780 ATAD5Q96QE3 1844 aa13.41□□□□□ -0.26
CHMP2B-201ENST00000263780 KRT18P05783 430 aaKnown RBP13.41□□□□□ -0.26
CHMP2B-201ENST00000263780 RARAP10276 462 aa13.41□□□□□ -0.26
CHMP2B-201ENST00000263780 ACTN1P12814 892 aa13.41□□□□□ -0.26
CHMP2B-201ENST00000263780 RPL13P26373 211 aaKnown RBP13.41□□□□□ -0.26
CHMP2B-201ENST00000263780 CHRNA3P32297 505 aa13.41□□□□□ -0.26
CHMP2B-201ENST00000263780 CCNG1P51959 295 aa13.41□□□□□ -0.26
CHMP2B-201ENST00000263780 NCALDP61601 193 aa13.41□□□□□ -0.26
CHMP2B-201ENST00000263780 SARNPP82979 210 aaKnown RBP13.41□□□□□ -0.26
CHMP2B-201ENST00000263780 MAPK7Q13164 816 aa13.41□□□□□ -0.26
CHMP2B-201ENST00000263780 PRPF4BQ13523 1007 aaKnown RBP13.41□□□□□ -0.26
CHMP2B-201ENST00000263780 SLC29A2Q14542 456 aa13.41□□□□□ -0.26
CHMP2B-201ENST00000263780 MFSD5Q6N075 450 aa13.41□□□□□ -0.26
CHMP2B-201ENST00000263780 DPY19L2P1Q6NXN4 242 aa13.41□□□□□ -0.26
CHMP2B-201ENST00000263780 JAMLQ86YT9 394 aa13.41□□□□□ -0.26
CHMP2B-201ENST00000263780 TEX9Q8N6V9 391 aa13.41□□□□□ -0.26
CHMP2B-201ENST00000263780 CTNNBL1Q8WYA6 563 aaPredicted RBP13.41□□□□□ -0.26
CHMP2B-201ENST00000263780 RNF25Q96BH1 459 aaPredicted RBP13.41□□□□□ -0.26
CHMP2B-201ENST00000263780 NUDT12Q9BQG2 462 aa13.41□□□□□ -0.26
CHMP2B-201ENST00000263780 TMEM260Q9NX78 707 aa13.41□□□□□ -0.26
CHMP2B-201ENST00000263780 GTPBP10A4D1E9 387 aaKnown RBP13.41□□□□□ -0.26
CHMP2B-201ENST00000263780 RASGRF2O14827 1237 aa13.41□□□□□ -0.26
CHMP2B-201ENST00000263780 KIAA0391O15091 583 aaKnown RBP13.41□□□□□ -0.26
CHMP2B-201ENST00000263780 WFS1O76024 890 aa13.41□□□□□ -0.26
CHMP2B-201ENST00000263780 ECM2O94769 699 aaPredicted RBP13.41□□□□□ -0.26
CHMP2B-201ENST00000263780 UBOX5O94941 541 aa13.41□□□□□ -0.26
CHMP2B-201ENST00000263780 TDP2O95551 362 aa13.41□□□□□ -0.26
CHMP2B-201ENST00000263780 PLA2G4BP0C869 781 aa13.41□□□□□ -0.26
CHMP2B-201ENST00000263780 PRDX5P30044 214 aa13.41□□□□□ -0.26
CHMP2B-201ENST00000263780 GALCP54803 685 aa13.41□□□□□ -0.26
CHMP2B-201ENST00000263780 JAM2P57087 298 aa13.41□□□□□ -0.26
CHMP2B-201ENST00000263780 BNIP1Q12981 228 aa13.41□□□□□ -0.26
CHMP2B-201ENST00000263780 CNGA2Q16280 664 aa13.41□□□□□ -0.26
CHMP2B-201ENST00000263780 PPP1R18Q6NYC8 613 aa13.41□□□□□ -0.26
CHMP2B-201ENST00000263780 ACSBG1Q96GR2 724 aa13.41□□□□□ -0.26
CHMP2B-201ENST00000263780 PIGSQ96S52 555 aa13.41□□□□□ -0.26
CHMP2B-201ENST00000263780 SH3GL3Q99963 347 aa13.41□□□□□ -0.26
CHMP2B-201ENST00000263780 ANKRD2Q9GZV1 360 aa13.41□□□□□ -0.26
CHMP2B-201ENST00000263780 VAT1LQ9HCJ6 419 aa13.41□□□□□ -0.26
CHMP2B-201ENST00000263780 ABCF3Q9NUQ8 709 aa13.41□□□□□ -0.26
CHMP2B-201ENST00000263780 TBC1D7Q9P0N9 293 aa13.41□□□□□ -0.26
CHMP2B-201ENST00000263780 PCDHA12Q9UN75 941 aa13.41□□□□□ -0.26
CHMP2B-201ENST00000263780 ARL2BPQ9Y2Y0 163 aa13.41□□□□□ -0.26
CHMP2B-201ENST00000263780 L3MBTL1Q9Y468 752 aa13.41□□□□□ -0.26
CHMP2B-201ENST00000263780 CCDC88AQ3V6T2 1871 aa13.41□□□□□ -0.26
CHMP2B-201ENST00000263780 DDX3XO00571 662 aaKnown RBP eCLIP13.4□□□□□ -0.264e-9■■□□□ 12.1
CHMP2B-201ENST00000263780 DDX3YO15523 660 aaKnown RBP13.4□□□□□ -0.26
CHMP2B-201ENST00000263780 DIAPH2O60879 1101 aa13.4□□□□□ -0.26
CHMP2B-201ENST00000263780 GGPS1O95749 300 aa13.4□□□□□ -0.26
CHMP2B-201ENST00000263780 OAS1P00973 400 aaKnown RBP13.4□□□□□ -0.26
CHMP2B-201ENST00000263780 SKIV2L2P42285 1042 aaKnown RBP13.4□□□□□ -0.26
CHMP2B-201ENST00000263780 ALDH5A1P51649 535 aaPredicted RBP13.4□□□□□ -0.26
CHMP2B-201ENST00000263780 MKRN3Q13064 507 aaKnown RBP13.4□□□□□ -0.26
CHMP2B-201ENST00000263780 PTPROQ16827 1216 aa13.4□□□□□ -0.26
CHMP2B-201ENST00000263780 GPBP1Q86WP2 473 aa13.4□□□□□ -0.26
CHMP2B-201ENST00000263780 RAB3IPQ96QF0 476 aaPredicted RBP13.4□□□□□ -0.26
CHMP2B-201ENST00000263780 RIOX1Q9H6W3 641 aa13.4□□□□□ -0.26
CHMP2B-201ENST00000263780 DDX25Q9UHL0 483 aaKnown RBP13.4□□□□□ -0.26
CHMP2B-201ENST00000263780 IGF2BP3O00425 579 aaKnown RBP eCLIP13.4□□□□□ -0.26
CHMP2B-201ENST00000263780 SLC16A3O15427 465 aaKnown RBP13.4□□□□□ -0.26
CHMP2B-201ENST00000263780 RASA1P20936 1047 aa13.4□□□□□ -0.26
CHMP2B-201ENST00000263780 IFI35P80217 286 aaPredicted RBP13.4□□□□□ -0.26
CHMP2B-201ENST00000263780 PLS1Q14651 629 aa13.4□□□□□ -0.26
CHMP2B-201ENST00000263780 EPHA7Q15375 998 aa13.4□□□□□ -0.26
CHMP2B-201ENST00000263780 TNFAIP8L3Q5GJ75 292 aa13.4□□□□□ -0.26
CHMP2B-201ENST00000263780 APLFQ8IW19 511 aaPredicted RBP13.4□□□□□ -0.26
CHMP2B-201ENST00000263780 NEDD1Q8NHV4 660 aa13.4□□□□□ -0.26
CHMP2B-201ENST00000263780 SLC35G2Q8TBE7 412 aa13.4□□□□□ -0.26
CHMP2B-201ENST00000263780 RBM46Q8TBY0 533 aaKnown RBP13.4□□□□□ -0.26
CHMP2B-201ENST00000263780 KANSL2Q9H9L4 492 aa13.4□□□□□ -0.26
CHMP2B-201ENST00000263780 ARHGEF3Q9NR81 526 aa13.4□□□□□ -0.26
CHMP2B-201ENST00000263780 SLC5A4Q9NY91 659 aa13.4□□□□□ -0.26
CHMP2B-201ENST00000263780 AGAP1Q9UPQ3 857 aa13.4□□□□□ -0.26
CHMP2B-201ENST00000263780 SNX24Q9Y343 169 aa13.4□□□□□ -0.26
CHMP2B-201ENST00000263780 MYH4Q9Y623 1939 aa13.4□□□□□ -0.26
CHMP2B-201ENST00000263780 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.39□□□□□ -0.27
CHMP2B-201ENST00000263780 MIF4GDA9UHW6 222 aaKnown RBP13.39□□□□□ -0.27
CHMP2B-201ENST00000263780 PDXKO00764 312 aa13.39□□□□□ -0.27
CHMP2B-201ENST00000263780 PHF2O75151 1096 aa13.39□□□□□ -0.27
CHMP2B-201ENST00000263780 SMNDC1O75940 238 aaKnown RBP eCLIP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms