RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 BADQ92934 168 aa20.45■□□□□ 0.86
SDF4-201ENST00000263741 ZNF668Q96K58 619 aaPredicted RBP20.45■□□□□ 0.86
SDF4-201ENST00000263741 NACC1Q96RE7 527 aa20.45■□□□□ 0.86
SDF4-201ENST00000263741 BHMT2Q9H2M3 363 aa20.45■□□□□ 0.86
SDF4-201ENST00000263741 A0A087X0B3 334 aa20.44■□□□□ 0.86
SDF4-201ENST00000263741 VTNP04004 478 aa20.44■□□□□ 0.86
SDF4-201ENST00000263741 POLGP54098 1239 aaPredicted RBP20.44■□□□□ 0.86
SDF4-201ENST00000263741 MKRN4PQ13434 485 aaPredicted RBP20.44■□□□□ 0.86
SDF4-201ENST00000263741 TMEM119Q4V9L6 283 aa20.44■□□□□ 0.86
SDF4-201ENST00000263741 PANK2Q9BZ23 570 aa20.44■□□□□ 0.86
SDF4-201ENST00000263741 OSBPL7Q9BZF2 842 aa20.44■□□□□ 0.86
SDF4-201ENST00000263741 ANKEF1Q9NU02 776 aa20.44■□□□□ 0.86
SDF4-201ENST00000263741 CUTAO60888 179 aa20.44■□□□□ 0.86
SDF4-201ENST00000263741 TIMP1P01033 207 aa20.44■□□□□ 0.86
SDF4-201ENST00000263741 EMC2Q15006 297 aa20.44■□□□□ 0.86
SDF4-201ENST00000263741 HYIQ5T013 277 aa20.44■□□□□ 0.86
SDF4-201ENST00000263741 TAF2Q6P1X5 1199 aa20.44■□□□□ 0.86
SDF4-201ENST00000263741 MAEAQ7L5Y9 396 aa20.44■□□□□ 0.86
SDF4-201ENST00000263741 CALML4Q96GE6 196 aa20.44■□□□□ 0.86
SDF4-201ENST00000263741 MCM4P33991 863 aa20.43■□□□□ 0.86
SDF4-201ENST00000263741 TRAF7Q6Q0C0 670 aa20.43■□□□□ 0.86
SDF4-201ENST00000263741 LRRC8DQ7L1W4 858 aa20.43■□□□□ 0.86
SDF4-201ENST00000263741 KIAA0319LQ8IZA0 1049 aa20.43■□□□□ 0.86
SDF4-201ENST00000263741 PDILTQ8N807 584 aa20.43■□□□□ 0.86
SDF4-201ENST00000263741 CAGE1Q8TC20 777 aa20.43■□□□□ 0.86
SDF4-201ENST00000263741 TMEM143Q96AN5 459 aa20.43■□□□□ 0.86
SDF4-201ENST00000263741 STK24Q9Y6E0 443 aa20.43■□□□□ 0.86
SDF4-201ENST00000263741 SMIM35A0A1B0GVV1 85 aa20.42■□□□□ 0.86
SDF4-201ENST00000263741 ARHGEF35A5YM69 484 aa20.42■□□□□ 0.86
SDF4-201ENST00000263741 MAFO75444 373 aaPredicted RBP20.42■□□□□ 0.86
SDF4-201ENST00000263741 SSBP05455 408 aaKnown RBP eCLIP20.42■□□□□ 0.86
SDF4-201ENST00000263741 BFSP2Q13515 415 aa20.42■□□□□ 0.86
SDF4-201ENST00000263741 MBTPS1Q14703 1052 aa20.42■□□□□ 0.86
SDF4-201ENST00000263741 LINC01465Q8N7H1 131 aa20.42■□□□□ 0.86
SDF4-201ENST00000263741 CCSER1Q9C0I3 900 aa20.42■□□□□ 0.86
SDF4-201ENST00000263741 DHX33Q9H6R0 707 aaKnown RBP20.42■□□□□ 0.86
SDF4-201ENST00000263741 POLD4Q9HCU8 107 aa20.42■□□□□ 0.86
SDF4-201ENST00000263741 XPNPEP1Q9NQW7 623 aa20.42■□□□□ 0.86
SDF4-201ENST00000263741 AKT3Q9Y243 479 aa20.42■□□□□ 0.86
SDF4-201ENST00000263741 GINS2Q9Y248 185 aa20.42■□□□□ 0.86
SDF4-201ENST00000263741 PITPNM1O00562 1244 aa20.42■□□□□ 0.86
SDF4-201ENST00000263741 CSF2RAP15509 400 aa20.42■□□□□ 0.86
SDF4-201ENST00000263741 DHX8Q14562 1220 aaKnown RBP20.42■□□□□ 0.86
SDF4-201ENST00000263741 CCDC155Q8N6L0 562 aa20.42■□□□□ 0.86
SDF4-201ENST00000263741 SLC7A3Q8WY07 619 aa20.42■□□□□ 0.86
SDF4-201ENST00000263741 SCAND2PQ9GZW5 306 aaPredicted RBP20.42■□□□□ 0.86
SDF4-201ENST00000263741 DBR1Q9UK59 544 aaKnown RBP20.42■□□□□ 0.86
SDF4-201ENST00000263741 DNM3Q9UQ16 869 aa20.42■□□□□ 0.86
SDF4-201ENST00000263741 LAMA2P24043 3122 aaKnown RBP20.41■□□□□ 0.86
SDF4-201ENST00000263741 MAGEB2O15479 319 aa20.41■□□□□ 0.86
SDF4-201ENST00000263741 SELPP16109 830 aa20.41■□□□□ 0.86
SDF4-201ENST00000263741 MUTP22033 750 aa20.41■□□□□ 0.86
SDF4-201ENST00000263741 MAGEA10P43363 369 aaPredicted RBP20.41■□□□□ 0.86
SDF4-201ENST00000263741 KSR1Q8IVT5 923 aa20.41■□□□□ 0.86
SDF4-201ENST00000263741 RETREG2Q8NC44 543 aa20.41■□□□□ 0.86
SDF4-201ENST00000263741 NT5C3AQ9H0P0 336 aa20.41■□□□□ 0.86
SDF4-201ENST00000263741 GPRC5CQ9NQ84 441 aa20.41■□□□□ 0.86
SDF4-201ENST00000263741 BLOC1S4Q9NUP1 217 aa20.41■□□□□ 0.86
SDF4-201ENST00000263741 IGKV6-21A0A0C4DH24 114 aa20.41■□□□□ 0.86
SDF4-201ENST00000263741 EYA4O95677 639 aa20.41■□□□□ 0.86
SDF4-201ENST00000263741 CHRNA1P02708 482 aa20.41■□□□□ 0.86
SDF4-201ENST00000263741 IQCF3P0C7M6 154 aa20.41■□□□□ 0.86
SDF4-201ENST00000263741 TXLNAP40222 546 aa20.41■□□□□ 0.86
SDF4-201ENST00000263741 MRPS6P82932 125 aaKnown RBP20.41■□□□□ 0.86
SDF4-201ENST00000263741 RBL2Q08999 1139 aa20.41■□□□□ 0.86
SDF4-201ENST00000263741 PADI6Q6TGC4 694 aa20.41■□□□□ 0.86
SDF4-201ENST00000263741 DEFB128Q7Z7B8 93 aa20.41■□□□□ 0.86
SDF4-201ENST00000263741 RUSC1Q9BVN2 902 aa20.41■□□□□ 0.86
SDF4-201ENST00000263741 RTN4Q9NQC3 1192 aaKnown RBP20.41■□□□□ 0.86
SDF4-201ENST00000263741 CDY2AQ9Y6F7 541 aa20.41■□□□□ 0.86
SDF4-201ENST00000263741 RFC5P40937 340 aa20.4■□□□□ 0.86
SDF4-201ENST00000263741 KIZQ2M2Z5 673 aa20.4■□□□□ 0.86
SDF4-201ENST00000263741 MFSD5Q6N075 450 aa20.4■□□□□ 0.86
SDF4-201ENST00000263741 MTRQ99707 1265 aa20.4■□□□□ 0.86
SDF4-201ENST00000263741 CDHR5Q9HBB8 845 aa20.4■□□□□ 0.86
SDF4-201ENST00000263741 ATP6V0A4Q9HBG4 840 aa20.4■□□□□ 0.86
SDF4-201ENST00000263741 RSPH10B2B2RC85 870 aa20.39■□□□□ 0.86
SDF4-201ENST00000263741 RSPH10BP0C881 870 aa20.39■□□□□ 0.86
SDF4-201ENST00000263741 ACRP10323 421 aa20.39■□□□□ 0.86
SDF4-201ENST00000263741 XRCC6P12956 609 aaKnown RBP eCLIP20.39■□□□□ 0.86
SDF4-201ENST00000263741 EPHB4P54760 987 aa20.39■□□□□ 0.86
SDF4-201ENST00000263741 MGAT3Q09327 533 aa20.39■□□□□ 0.86
SDF4-201ENST00000263741 RAD51AP2Q09MP3 1159 aa20.39■□□□□ 0.86
SDF4-201ENST00000263741 MCM6Q14566 821 aa20.39■□□□□ 0.86
SDF4-201ENST00000263741 GPNMBQ14956 572 aa20.39■□□□□ 0.86
SDF4-201ENST00000263741 RSPH3Q86UC2 560 aa20.39■□□□□ 0.86
SDF4-201ENST00000263741 MAP7D2Q96T17 732 aa20.39■□□□□ 0.86
SDF4-201ENST00000263741 LBHD1Q9BQE6 289 aaPredicted RBP20.39■□□□□ 0.86
SDF4-201ENST00000263741 MICAL3Q7RTP6 2002 aa20.39■□□□□ 0.86
SDF4-201ENST00000263741 DGAT1O75907 488 aa20.39■□□□□ 0.85
SDF4-201ENST00000263741 PLA2G4BP0C869 781 aa20.39■□□□□ 0.85
SDF4-201ENST00000263741 NAALADL2Q58DX5 795 aa20.39■□□□□ 0.85
SDF4-201ENST00000263741 RESP18Q5W5W9 173 aa20.39■□□□□ 0.85
SDF4-201ENST00000263741 RHPN2Q8IUC4 686 aa20.39■□□□□ 0.85
SDF4-201ENST00000263741 VWCEQ96DN2 955 aa20.39■□□□□ 0.85
SDF4-201ENST00000263741 SUCLA2Q9P2R7 463 aaPredicted RBP20.39■□□□□ 0.85
SDF4-201ENST00000263741 CCDC39Q9UFE4 941 aa20.39■□□□□ 0.85
SDF4-201ENST00000263741 NBNO60934 754 aa20.38■□□□□ 0.85
SDF4-201ENST00000263741 TMOD1P28289 359 aa20.38■□□□□ 0.85
SDF4-201ENST00000263741 RRAGBQ5VZM2 374 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms