RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 KLRF2D3W0D1 207 aa15.03■□□□□ -0
SGCA-201ENST00000262018 LGALS2P05162 132 aa15.03■□□□□ -0
SGCA-201ENST00000262018 U2AF2P26368 475 aaKnown RBP eCLIP15.03■□□□□ -0
SGCA-201ENST00000262018 CDC37Q16543 378 aaPredicted RBP15.03■□□□□ -0
SGCA-201ENST00000262018 CAVIN1Q6NZI2 390 aaKnown RBP15.03■□□□□ -0
SGCA-201ENST00000262018 KCNV1Q6PIU1 500 aa15.03■□□□□ -0
SGCA-201ENST00000262018 KIAA2013Q8IYS2 634 aa15.03■□□□□ -0
SGCA-201ENST00000262018 STAG2Q8N3U4 1231 aa15.03■□□□□ -0
SGCA-201ENST00000262018 LZTS2Q9BRK4 669 aa15.03■□□□□ -0
SGCA-201ENST00000262018 UBA5Q9GZZ9 404 aa15.03■□□□□ -0
SGCA-201ENST00000262018 S1PR5Q9H228 398 aa15.03■□□□□ -0
SGCA-201ENST00000262018 SMOC2Q9H3U7 446 aa15.03■□□□□ -0
SGCA-201ENST00000262018 RCOR1Q9UKL0 485 aa15.03■□□□□ -0
SGCA-201ENST00000262018 NR2E1Q9Y466 385 aa15.03■□□□□ -0
SGCA-201ENST00000262018 V9GY48 417 aaPredicted RBP15.03■□□□□ -0
SGCA-201ENST00000262018 ZNF292O60281 2723 aa15.03■□□□□ -0
SGCA-201ENST00000262018 UBA1P22314 1058 aaKnown RBP15.02■□□□□ -0
SGCA-201ENST00000262018 TECP42680 631 aa15.02■□□□□ -0
SGCA-201ENST00000262018 ARHGAP4P98171 946 aa15.02■□□□□ -0
SGCA-201ENST00000262018 SP2Q02086 613 aa15.02■□□□□ -0
SGCA-201ENST00000262018 LPIN1Q14693 890 aa15.02■□□□□ -0
SGCA-201ENST00000262018 DUSP6Q16828 381 aa15.02■□□□□ -0
SGCA-201ENST00000262018 USP28Q96RU2 1077 aa15.02■□□□□ -0
SGCA-201ENST00000262018 EHMT1Q9H9B1 1298 aa15.02■□□□□ -0
SGCA-201ENST00000262018 VPS13AQ96RL7 3174 aa15.02■□□□□ -0
SGCA-201ENST00000262018 KMT2BQ9UMN6 2715 aaPredicted RBP15.02■□□□□ -0
SGCA-201ENST00000262018 TTC3P53804 2025 aa15.02□□□□□ -0.01
SGCA-201ENST00000262018 CFBP00751 764 aa15.01□□□□□ -0.01
SGCA-201ENST00000262018 SRGAP2BP0DMP2 458 aa15.01□□□□□ -0.01
SGCA-201ENST00000262018 XBP1P17861 261 aa15.01□□□□□ -0.01
SGCA-201ENST00000262018 SMARCA1P28370 1054 aa15.01□□□□□ -0.01
SGCA-201ENST00000262018 CLCN5P51795 746 aa15.01□□□□□ -0.01
SGCA-201ENST00000262018 PUM1Q14671 1186 aaKnown RBP eCLIP15.01□□□□□ -0.01
SGCA-201ENST00000262018 SAFBQ15424 915 aaKnown RBP eCLIP15.01□□□□□ -0.01
SGCA-201ENST00000262018 ANKRD54Q6NXT1 300 aa15.01□□□□□ -0.01
SGCA-201ENST00000262018 FLCNQ8NFG4 579 aa15.01□□□□□ -0.01
SGCA-201ENST00000262018 CDCA3Q99618 268 aaPredicted RBP15.01□□□□□ -0.01
SGCA-201ENST00000262018 RTEL1Q9NZ71 1219 aa15.01□□□□□ -0.01
SGCA-201ENST00000262018 TMEM63CQ9P1W3 806 aa15.01□□□□□ -0.01
SGCA-201ENST00000262018 KIAA1671Q9BY89 1806 aa15.01□□□□□ -0.01
SGCA-201ENST00000262018 WDR87Q6ZQQ6 2873 aa15.01□□□□□ -0.01
SGCA-201ENST00000262018 FSD2A1L4K1 749 aa15□□□□□ -0.01
SGCA-201ENST00000262018 NOP56O00567 594 aaKnown RBP15□□□□□ -0.01
SGCA-201ENST00000262018 PFKFB3Q16875 520 aaPredicted RBP15□□□□□ -0.01
SGCA-201ENST00000262018 SYCE2Q6PIF2 218 aa15□□□□□ -0.01
SGCA-201ENST00000262018 ADGRF4Q8IZF3 695 aa15□□□□□ -0.01
SGCA-201ENST00000262018 LMBR1Q8WVP7 490 aa15□□□□□ -0.01
SGCA-201ENST00000262018 GPKOWQ92917 476 aaPredicted RBP eCLIP15□□□□□ -0.01
SGCA-201ENST00000262018 SYAP1Q96A49 352 aaPredicted RBP15□□□□□ -0.01
SGCA-201ENST00000262018 ZFP91Q96JP5 570 aaPredicted RBP15□□□□□ -0.01
SGCA-201ENST00000262018 PHF20Q9BVI0 1012 aa15□□□□□ -0.01
SGCA-201ENST00000262018 SPZ1Q9BXG8 430 aa15□□□□□ -0.01
SGCA-201ENST00000262018 FOXP1Q9H334 677 aaPredicted RBP15□□□□□ -0.01
SGCA-201ENST00000262018 BCAS3Q9H6U6 928 aa15□□□□□ -0.01
SGCA-201ENST00000262018 KCNJ14Q9UNX9 436 aa15□□□□□ -0.01
SGCA-201ENST00000262018 MRPL11Q9Y3B7 192 aaKnown RBP15□□□□□ -0.01
SGCA-201ENST00000262018 DMDP11532 3685 aa15□□□□□ -0.01
SGCA-201ENST00000262018 MYO10Q9HD67 2058 aa15□□□□□ -0.01
SGCA-201ENST00000262018 C2CD4DB7Z1M9 353 aa15□□□□□ -0.01
SGCA-201ENST00000262018 YEATS4O95619 227 aa15□□□□□ -0.01
SGCA-201ENST00000262018 SCG2P13521 617 aa15□□□□□ -0.01
SGCA-201ENST00000262018 NASPP49321 788 aaPredicted RBP15□□□□□ -0.01
SGCA-201ENST00000262018 ZNF445P59923 1031 aa15□□□□□ -0.01
SGCA-201ENST00000262018 GNL2Q13823 731 aaKnown RBP15□□□□□ -0.01
SGCA-201ENST00000262018 ANGPT1Q15389 498 aa15□□□□□ -0.01
SGCA-201ENST00000262018 SLC35G1Q2M3R5 365 aa15□□□□□ -0.01
SGCA-201ENST00000262018 ZSCAN23Q3MJ62 389 aa15□□□□□ -0.01
SGCA-201ENST00000262018 LLGL2Q6P1M3 1020 aa15□□□□□ -0.01
SGCA-201ENST00000262018 RUFY4Q6ZNE9 571 aa15□□□□□ -0.01
SGCA-201ENST00000262018 TRIM50Q86XT4 487 aa15□□□□□ -0.01
SGCA-201ENST00000262018 NPAS4Q8IUM7 802 aa15□□□□□ -0.01
SGCA-201ENST00000262018 DIS3L2Q8IYB7 885 aaKnown RBP15□□□□□ -0.01
SGCA-201ENST00000262018 LINC01599Q8WXQ3 324 aa15□□□□□ -0.01
SGCA-201ENST00000262018 PGBD1Q96JS3 809 aa15□□□□□ -0.01
SGCA-201ENST00000262018 PDCD2LQ9BRP1 358 aa15□□□□□ -0.01
SGCA-201ENST00000262018 RIOX1Q9H6W3 641 aa15□□□□□ -0.01
SGCA-201ENST00000262018 JMJD4Q9H9V9 463 aa15□□□□□ -0.01
SGCA-201ENST00000262018 CDH22Q9UJ99 828 aa15□□□□□ -0.01
SGCA-201ENST00000262018 LMNAP02545 664 aaKnown RBP14.99□□□□□ -0.01
SGCA-201ENST00000262018 ASGR2P07307 311 aa14.99□□□□□ -0.01
SGCA-201ENST00000262018 TGFB3P10600 412 aa14.99□□□□□ -0.01
SGCA-201ENST00000262018 GATMP50440 423 aa14.99□□□□□ -0.01
SGCA-201ENST00000262018 ERVFC1P60507 584 aa14.99□□□□□ -0.01
SGCA-201ENST00000262018 ADAM17P78536 824 aa14.99□□□□□ -0.01
SGCA-201ENST00000262018 UBE3AQ05086 875 aa14.99□□□□□ -0.01
SGCA-201ENST00000262018 MGAT3Q09327 533 aa14.99□□□□□ -0.01
SGCA-201ENST00000262018 FBXO47Q5MNV8 452 aa14.99□□□□□ -0.01
SGCA-201ENST00000262018 SPOUT1Q5T280 376 aaKnown RBP14.99□□□□□ -0.01
SGCA-201ENST00000262018 UTP14CQ5TAP6 766 aaKnown RBP14.99□□□□□ -0.01
SGCA-201ENST00000262018 NOSTRINQ8IVI9 506 aa14.99□□□□□ -0.01
SGCA-201ENST00000262018 FAM177A1Q8N128 213 aaPredicted RBP14.99□□□□□ -0.01
SGCA-201ENST00000262018 SH3GLB2Q9NR46 395 aa14.99□□□□□ -0.01
SGCA-201ENST00000262018 VPS54Q9P1Q0 977 aa14.99□□□□□ -0.01
SGCA-201ENST00000262018 PCDHB12Q9Y5F1 795 aa14.99□□□□□ -0.01
SGCA-201ENST00000262018 ACACBO00763 2458 aa14.98□□□□□ -0.01
SGCA-201ENST00000262018 PLXNA4Q9HCM2 1894 aa14.98□□□□□ -0.01
SGCA-201ENST00000262018 hCG_1642624A0A1W2PR95 340 aa14.98□□□□□ -0.01
SGCA-201ENST00000262018 BTBD18B2RXH4 712 aa14.98□□□□□ -0.01
SGCA-201ENST00000262018 CYTH3O43739 400 aa14.98□□□□□ -0.01
SGCA-201ENST00000262018 STAG3L1P0CL83 205 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms