RNA–Protein interactions for RNA: ENST00000261965.7

TUBGCP3-201, Transcript of tubulin gamma complex associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBGCP3, Length 3,899 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-201ENST00000261965 SERPINB2P05120 415 aa15.19■□□□□ 0.02
TUBGCP3-201ENST00000261965 HLA-DOAP06340 250 aa15.19■□□□□ 0.02
TUBGCP3-201ENST00000261965 TRIM49P0CI25 452 aa15.19■□□□□ 0.02
TUBGCP3-201ENST00000261965 TRIM49CP0CI26 452 aa15.19■□□□□ 0.02
TUBGCP3-201ENST00000261965 KCNJ1P48048 391 aa15.19■□□□□ 0.02
TUBGCP3-201ENST00000261965 ZNF543Q08ER8 600 aa15.19■□□□□ 0.02
TUBGCP3-201ENST00000261965 INTS8Q75QN2 995 aaKnown RBP15.19■□□□□ 0.02
TUBGCP3-201ENST00000261965 CYFIP2Q96F07 1278 aa15.19■□□□□ 0.02
TUBGCP3-201ENST00000261965 GPR75-ASB3A0A0A6YYF3 556 aa15.18■□□□□ 0.02
TUBGCP3-201ENST00000261965 UBAP1LF5GYI3 381 aa15.18■□□□□ 0.02
TUBGCP3-201ENST00000261965 UPP2O95045 317 aa15.18■□□□□ 0.02
TUBGCP3-201ENST00000261965 CYP11B2P19099 503 aa15.18■□□□□ 0.02
TUBGCP3-201ENST00000261965 PPP4CP60510 307 aa15.18■□□□□ 0.02
TUBGCP3-201ENST00000261965 ASPRV1Q53RT3 343 aa15.18■□□□□ 0.02
TUBGCP3-201ENST00000261965 FIGNQ5HY92 759 aa15.18■□□□□ 0.02
TUBGCP3-201ENST00000261965 YIPF3Q9GZM5 350 aa15.18■□□□□ 0.02
TUBGCP3-201ENST00000261965 SLC40A1Q9NP59 571 aa15.18■□□□□ 0.02
TUBGCP3-201ENST00000261965 KCNQ5Q9NR82 932 aa15.18■□□□□ 0.02
TUBGCP3-201ENST00000261965 NOC2LQ9Y3T9 749 aaKnown RBP15.18■□□□□ 0.02
TUBGCP3-201ENST00000261965 POC1B-GALNT4F8VUJ3 575 aa15.18■□□□□ 0.02
TUBGCP3-201ENST00000261965 NMT1P30419 496 aaKnown RBP15.18■□□□□ 0.02
TUBGCP3-201ENST00000261965 FXR2P51116 673 aaKnown RBP eCLIP15.18■□□□□ 0.028e-7■■■■□ 25.7
TUBGCP3-201ENST00000261965 SLFN13Q68D06 897 aa15.18■□□□□ 0.02
TUBGCP3-201ENST00000261965 RFX8Q6ZV50 586 aa15.18■□□□□ 0.02
TUBGCP3-201ENST00000261965 SLF2Q8IX21 1173 aa15.18■□□□□ 0.02
TUBGCP3-201ENST00000261965 PPM1KQ8N3J5 372 aa15.18■□□□□ 0.02
TUBGCP3-201ENST00000261965 ANKS1AQ92625 1134 aa15.18■□□□□ 0.02
TUBGCP3-201ENST00000261965 REEP2Q9BRK0 252 aa15.18■□□□□ 0.02
TUBGCP3-201ENST00000261965 EPN3Q9H201 632 aa15.18■□□□□ 0.02
TUBGCP3-201ENST00000261965 L3MBTL1Q9Y468 752 aa15.18■□□□□ 0.02
TUBGCP3-201ENST00000261965 ITGB4P16144 1822 aa15.18■□□□□ 0.02
TUBGCP3-201ENST00000261965 PDHA1P08559 390 aa15.18■□□□□ 0.02
TUBGCP3-201ENST00000261965 CDC37Q16543 378 aaPredicted RBP15.18■□□□□ 0.02
TUBGCP3-201ENST00000261965 ERMNQ8TAM6 284 aa15.18■□□□□ 0.02
TUBGCP3-201ENST00000261965 UCHL3P15374 230 aa15.18■□□□□ 0.02
TUBGCP3-201ENST00000261965 KRT15P19012 456 aa15.18■□□□□ 0.02
TUBGCP3-201ENST00000261965 LACTBP83111 547 aaPredicted RBP15.18■□□□□ 0.02
TUBGCP3-201ENST00000261965 SEPT2Q15019 361 aa15.18■□□□□ 0.02
TUBGCP3-201ENST00000261965 NAB2Q15742 525 aa15.18■□□□□ 0.02
TUBGCP3-201ENST00000261965 SEL1L2Q5TEA6 688 aa15.18■□□□□ 0.02
TUBGCP3-201ENST00000261965 KAZNQ674X7 775 aa15.18■□□□□ 0.02
TUBGCP3-201ENST00000261965 HOOK3Q86VS8 718 aa15.18■□□□□ 0.02
TUBGCP3-201ENST00000261965 SUPT20HQ8NEM7 779 aa15.18■□□□□ 0.02
TUBGCP3-201ENST00000261965 RIOX1Q9H6W3 641 aa15.18■□□□□ 0.02
TUBGCP3-201ENST00000261965 OSGEPQ9NPF4 335 aa15.18■□□□□ 0.02
TUBGCP3-201ENST00000261965 TSKSQ9UJT2 592 aa15.18■□□□□ 0.02
TUBGCP3-201ENST00000261965 BCL9LQ86UU0 1499 aa15.17■□□□□ 0.02
TUBGCP3-201ENST00000261965 CACNA1SQ13698 1873 aa15.17■□□□□ 0.02
TUBGCP3-201ENST00000261965 ZBTB5O15062 677 aa15.17■□□□□ 0.02
TUBGCP3-201ENST00000261965 FLT3P36888 993 aa15.17■□□□□ 0.02
TUBGCP3-201ENST00000261965 CETN1Q12798 172 aa15.17■□□□□ 0.02
TUBGCP3-201ENST00000261965 CCDC174Q6PII3 467 aa15.17■□□□□ 0.02
TUBGCP3-201ENST00000261965 SPIRE2Q8WWL2 714 aa15.17■□□□□ 0.02
TUBGCP3-201ENST00000261965 NT5C3AQ9H0P0 336 aa15.17■□□□□ 0.02
TUBGCP3-201ENST00000261965 TAF1DQ9H5J8 278 aaPredicted RBP15.17■□□□□ 0.02
TUBGCP3-201ENST00000261965 HOMER2Q9NSB8 354 aa15.17■□□□□ 0.02
TUBGCP3-201ENST00000261965 EDIL3O43854 480 aa15.17■□□□□ 0.02
TUBGCP3-201ENST00000261965 ERVK-9P63128 1117 aa15.17■□□□□ 0.02
TUBGCP3-201ENST00000261965 PTGISQ16647 500 aa15.17■□□□□ 0.02
TUBGCP3-201ENST00000261965 CATSPER3Q86XQ3 398 aa15.17■□□□□ 0.02
TUBGCP3-201ENST00000261965 TBC1D16Q8TBP0 767 aa15.17■□□□□ 0.02
TUBGCP3-201ENST00000261965 DHX36Q9H2U1 1008 aaKnown RBP15.17■□□□□ 0.02
TUBGCP3-201ENST00000261965 NKIRAS1Q9NYS0 192 aa15.17■□□□□ 0.02
TUBGCP3-201ENST00000261965 DISP2A7MBM2 1401 aa15.17■□□□□ 0.02
TUBGCP3-201ENST00000261965 SPATA31A5Q5VU36 1347 aa15.17■□□□□ 0.02
TUBGCP3-201ENST00000261965 SPATA31A7Q8IWB4 1347 aa15.17■□□□□ 0.02
TUBGCP3-201ENST00000261965 AFPP02771 609 aaKnown RBP15.17■□□□□ 0.02
TUBGCP3-201ENST00000261965 HSD17B3P37058 310 aa15.17■□□□□ 0.02
TUBGCP3-201ENST00000261965 TIAM2Q8IVF5 1701 aa15.16■□□□□ 0.02
TUBGCP3-201ENST00000261965 AKAP3O75969 853 aa15.16■□□□□ 0.02
TUBGCP3-201ENST00000261965 YY1P25490 414 aa15.16■□□□□ 0.02
TUBGCP3-201ENST00000261965 PARP9Q8IXQ6 854 aa15.16■□□□□ 0.02
TUBGCP3-201ENST00000261965 METTL13Q8N6R0 699 aa15.16■□□□□ 0.02
TUBGCP3-201ENST00000261965 HEMGNQ9BXL5 484 aa15.16■□□□□ 0.02
TUBGCP3-201ENST00000261965 FRMD4BQ9Y2L6 1034 aa15.16■□□□□ 0.02
TUBGCP3-201ENST00000261965 SSU72P8A0A1W2PR75 194 aa15.16■□□□□ 0.02
TUBGCP3-201ENST00000261965 CDK17Q00537 523 aa15.16■□□□□ 0.02
TUBGCP3-201ENST00000261965 COG2Q14746 738 aa15.16■□□□□ 0.02
TUBGCP3-201ENST00000261965 BICD1Q96G01 975 aa15.16■□□□□ 0.02
TUBGCP3-201ENST00000261965 PRMT1Q99873 361 aaKnown RBP15.16■□□□□ 0.02
TUBGCP3-201ENST00000261965 SWAP70Q9UH65 585 aa15.16■□□□□ 0.02
TUBGCP3-201ENST00000261965 HMGB1P1B2RPK0 211 aaPredicted RBP15.16■□□□□ 0.02
TUBGCP3-201ENST00000261965 ATMINO43313 823 aaPredicted RBP15.16■□□□□ 0.02
TUBGCP3-201ENST00000261965 RPL13P26373 211 aaKnown RBP15.16■□□□□ 0.02
TUBGCP3-201ENST00000261965 PPP2R2AP63151 447 aa15.16■□□□□ 0.02
TUBGCP3-201ENST00000261965 MXRA7P84157 204 aa15.16■□□□□ 0.02
TUBGCP3-201ENST00000261965 ARHGAP4P98171 946 aa15.16■□□□□ 0.02
TUBGCP3-201ENST00000261965 DR1Q01658 176 aa15.16■□□□□ 0.02
TUBGCP3-201ENST00000261965 PDIA5Q14554 519 aa15.16■□□□□ 0.02
TUBGCP3-201ENST00000261965 TRIM59Q8IWR1 403 aa15.16■□□□□ 0.02
TUBGCP3-201ENST00000261965 USP38Q8NB14 1042 aa15.16■□□□□ 0.02
TUBGCP3-201ENST00000261965 AJAP1Q9UKB5 411 aaPredicted RBP15.16■□□□□ 0.02
TUBGCP3-201ENST00000261965 GOLGA8IPA6NC78 632 aa15.15■□□□□ 0.02
TUBGCP3-201ENST00000261965 GOLGA8JA6NMD2 632 aa15.15■□□□□ 0.02
TUBGCP3-201ENST00000261965 ATP2B4P23634 1241 aa15.15■□□□□ 0.02
TUBGCP3-201ENST00000261965 TNIP1Q15025 636 aa15.15■□□□□ 0.02
TUBGCP3-201ENST00000261965 AADACL2Q6P093 401 aa15.15■□□□□ 0.02
TUBGCP3-201ENST00000261965 RBM17Q96I25 401 aaKnown RBP15.15■□□□□ 0.02
TUBGCP3-201ENST00000261965 SEC16BQ96JE7 1060 aa15.15■□□□□ 0.02
TUBGCP3-201ENST00000261965 CCDC169A6NNP5 214 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms