RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 PAPOLAP51003 745 aaKnown RBP4.63□□□□□ -1.67
VPS13C-202ENST00000261517 EPHA7Q15375 998 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 NBPF20Q3BBV1 942 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 DCAF4L1Q3SXM0 396 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 LRRC24Q50LG9 513 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 FAM47CQ5HY64 1035 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 ISM2Q6H9L7 571 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 NIPA1Q7RTP0 329 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 RNF139Q8WU17 664 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 NDST4Q9H3R1 872 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 LRRC4Q9HBW1 653 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 DPP7Q9UHL4 492 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 HSPA1LP34931 641 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 CYP2J2P51589 502 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 GPSM2P81274 684 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 TCP10Q12799 353 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 EIF2B5Q13144 721 aaKnown RBP4.63□□□□□ -1.67
VPS13C-202ENST00000261517 DBN1Q16643 649 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 TMCO4Q5TGY1 634 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 PPM1KQ8N3J5 372 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 ZNF557Q8N988 423 aaPredicted RBP4.63□□□□□ -1.67
VPS13C-202ENST00000261517 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.63□□□□□ -1.67
VPS13C-202ENST00000261517 HNRNPRO43390 633 aaKnown RBP4.63□□□□□ -1.67
VPS13C-202ENST00000261517 CTNND1O60716 968 aaKnown RBP4.63□□□□□ -1.67
VPS13C-202ENST00000261517 TTC4O95801 387 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 SERPINB4P48594 390 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 KNOP1Q1ED39 458 aaKnown RBP4.63□□□□□ -1.67
VPS13C-202ENST00000261517 ZNF667Q5HYK9 610 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 CASZ1Q86V15 1759 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 COL5A2P05997 1499 aaPredicted RBP4.63□□□□□ -1.67
VPS13C-202ENST00000261517 JAK2O60674 1132 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 EYA4O95677 639 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 PCSK2P16519 638 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 GCLCP48506 637 aaPredicted RBP4.63□□□□□ -1.67
VPS13C-202ENST00000261517 PPM1FP49593 454 aaPredicted RBP4.63□□□□□ -1.67
VPS13C-202ENST00000261517 NAA20P61599 178 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 MTMR1Q13613 665 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 PREPLQ4J6C6 727 aaPredicted RBP4.63□□□□□ -1.67
VPS13C-202ENST00000261517 FSCBQ5H9T9 825 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 FAM207AQ9NSI2 230 aaPredicted RBP4.63□□□□□ -1.67
VPS13C-202ENST00000261517 MAN1B1Q9UKM7 699 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 NUB1Q9Y5A7 615 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 TNPO2O14787 897 aaKnown RBP4.63□□□□□ -1.67
VPS13C-202ENST00000261517 CYP27B1O15528 508 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 PPFIA2O75334 1257 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 CHRNA3P32297 505 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 TAF1BQ53T94 588 aaPredicted RBP4.63□□□□□ -1.67
VPS13C-202ENST00000261517 EFL1Q7Z2Z2 1120 aaKnown RBP4.63□□□□□ -1.67
VPS13C-202ENST00000261517 VSIG1Q86XK7 387 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 CCDC13Q8IYE1 715 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 FAM9CQ8IZT9 166 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 LRRC8CQ8TDW0 803 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 TEX13BQ9BXU2 312 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 SLC38A10Q9HBR0 1119 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 DCP1AQ9NPI6 582 aaPredicted RBP4.63□□□□□ -1.67
VPS13C-202ENST00000261517 RSPH14Q9UHP6 348 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 ANGPTL3Q9Y5C1 460 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 FBLN1P23142 703 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 SNAPC2Q13487 334 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 CCDC144BQ3MJ40 725 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 C16orf86Q6ZW13 317 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 NT5DC4Q86YG4 428 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 CEP120Q8N960 986 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 NRBF2Q96F24 287 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 PAGE5Q96GU1 130 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 MYCBPQ99417 103 aaPredicted RBP4.63□□□□□ -1.67
VPS13C-202ENST00000261517 SEZ6LQ9BYH1 1024 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 KIF9Q9HAQ2 790 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 LY9Q9HBG7 655 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 ZSWIM5Q9P217 1185 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 AKT3Q9Y243 479 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 RHOXF2BP0C7M4 288 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 STMN1P16949 149 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 C15orf52Q6ZUT6 534 aaKnown RBP4.63□□□□□ -1.67
VPS13C-202ENST00000261517 OTUD7AQ8TE49 926 aaPredicted RBP4.63□□□□□ -1.67
VPS13C-202ENST00000261517 RHOXF2Q9BQY4 288 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 SMARCAD1Q9H4L7 1026 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 VIPAS39Q9H9C1 493 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 HPCAL4Q9UM19 191 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 CHUKO15111 745 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 XPAP23025 273 aaPredicted RBP4.63□□□□□ -1.67
VPS13C-202ENST00000261517 MCAMP43121 646 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 RECQLP46063 649 aaPredicted RBP4.63□□□□□ -1.67
VPS13C-202ENST00000261517 SCNN1DP51172 638 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 ARL4CP56559 192 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 STX1BP61266 288 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 TGFB2P61812 414 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 LRRC31Q6UY01 552 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 RAB42Q8N4Z0 105 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 CATSPER1Q8NEC5 780 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 MTBPQ96DY7 904 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 C7orf25Q9BPX7 421 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 BCS1LQ9Y276 419 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 PCDHA5Q9Y5H7 936 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 KAT6AQ92794 2004 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 ATP5BP06576 529 aaKnown RBP4.63□□□□□ -1.67
VPS13C-202ENST00000261517 MMP10P09238 476 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 CYP2C8P10632 490 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 SLC2A3P11169 496 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 PYGBP11216 843 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms