RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 TAF1DQ9H5J8 278 aaPredicted RBP4.51□□□□□ -1.69
UBE4A-201ENST00000252108 BCAS3Q9H6U6 928 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 INTUQ9ULD6 942 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 ODF2LQ9ULJ1 636 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 ASTN1O14525 1302 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 AFF2P51816 1311 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 B4DLN1 442 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 TRAF5O00463 557 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 TBX3O15119 743 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 PMM2O15305 246 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 EVI5O60447 810 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 TBCAO75347 108 aaKnown RBP4.51□□□□□ -1.69
UBE4A-201ENST00000252108 STBD1O95210 358 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 FAM107AO95990 144 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 SREBF1P36956 1147 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 ADCY2Q08462 1091 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 CALCOCO2Q13137 446 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 SEPT7Q16181 437 aaKnown RBP4.51□□□□□ -1.69
UBE4A-201ENST00000252108 CCDC142Q17RM4 750 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 EAPPQ56P03 285 aaPredicted RBP4.51□□□□□ -1.69
UBE4A-201ENST00000252108 PEX26Q7Z412 305 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 CEP57Q86XR8 500 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 CEP120Q8N960 986 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 TBCKQ8TEA7 893 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 USP21Q9UK80 565 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 CAPN6Q9Y6Q1 641 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 PNMA6FA0A0J9YX94 578 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 N4BP1O75113 896 aaKnown RBP4.51□□□□□ -1.69
UBE4A-201ENST00000252108 GGPS1O95749 300 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 PLEKP08567 350 aaPredicted RBP4.51□□□□□ -1.69
UBE4A-201ENST00000252108 H2AFZP0C0S5 128 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 CYP11B2P19099 503 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 LMNB1P20700 586 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 MDH1P40925 334 aaKnown RBP4.51□□□□□ -1.69
UBE4A-201ENST00000252108 ATP2B2Q01814 1243 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 RNASELQ05823 741 aaKnown RBP4.51□□□□□ -1.69
UBE4A-201ENST00000252108 KRT71Q3SY84 523 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 H2AFVQ71UI9 128 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 ZNF804AQ7Z570 1209 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 NLRP14Q86W24 1093 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 CNBD1Q8NA66 436 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 CTNNBL1Q8WYA6 563 aaPredicted RBP4.51□□□□□ -1.69
UBE4A-201ENST00000252108 STAMQ92783 540 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 TYW1Q9NV66 732 aaKnown RBP4.51□□□□□ -1.69
UBE4A-201ENST00000252108 WRAP73Q9P2S5 460 aaPredicted RBP4.51□□□□□ -1.69
UBE4A-201ENST00000252108 TFR2Q9UP52 801 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 CEP83Q9Y592 693 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 DUSP10Q9Y6W6 482 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 H0YGN5 161 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 COBLO75128 1261 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 ATP1A1P05023 1023 aaKnown RBP4.51□□□□□ -1.69
UBE4A-201ENST00000252108 CASP5P51878 434 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 GUCY2DQ02846 1103 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 MKRN3Q13064 507 aaKnown RBP4.51□□□□□ -1.69
UBE4A-201ENST00000252108 RAPGEF1Q13905 1077 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 TSNAXIP1Q2TAA8 658 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 TNFAIP8L3Q5GJ75 292 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 C6orf118Q5T5N4 469 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 PPP1R2P3Q6NXS1 205 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 CCDC24Q8N4L8 307 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 RBM46Q8TBY0 533 aaKnown RBP4.51□□□□□ -1.69
UBE4A-201ENST00000252108 MAGEC3Q8TD91 643 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 MMS19Q96T76 1030 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 PAGR1Q9BTK6 254 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 TUBB6Q9BUF5 446 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 NKIRAS1Q9NYS0 192 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 COL4A3BPQ9Y5P4 624 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 NFS1Q9Y697 457 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 FAM86B1E9PN63 330 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 DHX15O43143 795 aaKnown RBP4.5□□□□□ -1.69
UBE4A-201ENST00000252108 TGFB1I1O43294 461 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 SUN1O94901 812 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 SSBP05455 408 aaKnown RBP eCLIP4.5□□□□□ -1.69
UBE4A-201ENST00000252108 FAM86B2P0C5J1 330 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 C2orf54Q08AI8 447 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 CALCRLQ16602 461 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 EDRF1Q3B7T1 1238 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 TRAPPC3LQ5T215 181 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 C6orf163Q5TEZ5 329 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 KLHDC7AQ5VTJ3 777 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 CLEC10AQ8IUN9 316 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 MAPKAPK5Q8IW41 473 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 SEPT12Q8IYM1 358 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 CCDC63Q8NA47 563 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 EPB41L5Q9HCM4 733 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 CEP104O60308 925 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 EIF4A3P38919 411 aaKnown RBP4.5□□□□□ -1.69
UBE4A-201ENST00000252108 USP11P51784 963 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 IRX1P78414 480 aaPredicted RBP4.5□□□□□ -1.69
UBE4A-201ENST00000252108 REXO1Q8N1G1 1221 aaKnown RBP4.5□□□□□ -1.69
UBE4A-201ENST00000252108 HPS3Q969F9 1004 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 VCXQ9H320 206 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 CXorf56Q9H5V9 222 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 GOPCQ9HD26 462 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 KLC4Q9NSK0 619 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 TSC2P49815 1807 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 UTRNP46939 3433 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 PODXLO00592 558 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 TRIM66O15016 1216 aa4.5□□□□□ -1.69
UBE4A-201ENST00000252108 ZBTB5O15062 677 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms