RNA–Protein interactions for RNA: ENST00000249269.8

PMPCB-201, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMPCB, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-201ENST00000249269 IFT20Q8IY31 132 aa16.32■□□□□ 0.2
PMPCB-201ENST00000249269 SGCDQ92629 289 aa16.32■□□□□ 0.2
PMPCB-201ENST00000249269 RPGRQ92834 1020 aaKnown RBP16.32■□□□□ 0.2
PMPCB-201ENST00000249269 PGBD4Q96DM1 585 aa16.32■□□□□ 0.2
PMPCB-201ENST00000249269 C7orf25Q9BPX7 421 aa16.32■□□□□ 0.2
PMPCB-201ENST00000249269 BLZF1Q9H2G9 400 aa16.32■□□□□ 0.2
PMPCB-201ENST00000249269 KIF9Q9HAQ2 790 aa16.32■□□□□ 0.2
PMPCB-201ENST00000249269 STIM2Q9P246 746 aa16.32■□□□□ 0.2
PMPCB-201ENST00000249269 CROTQ9UKG9 612 aa16.32■□□□□ 0.2
PMPCB-201ENST00000249269 SSU72P8A0A1W2PR75 194 aa16.31■□□□□ 0.2
PMPCB-201ENST00000249269 M0QX08 132 aa16.31■□□□□ 0.2
PMPCB-201ENST00000249269 CES2O00748 559 aa16.31■□□□□ 0.2
PMPCB-201ENST00000249269 ATF7P17544 494 aaPredicted RBP16.31■□□□□ 0.2
PMPCB-201ENST00000249269 CDC25AP30304 524 aa16.31■□□□□ 0.2
PMPCB-201ENST00000249269 DDR1Q08345 913 aa16.31■□□□□ 0.2
PMPCB-201ENST00000249269 VPS72Q15906 364 aa16.31■□□□□ 0.2
PMPCB-201ENST00000249269 BLIDQ8IZY5 108 aa16.31■□□□□ 0.2
PMPCB-201ENST00000249269 SPATA4Q8NEY3 305 aa16.31■□□□□ 0.2
PMPCB-201ENST00000249269 RSAD2Q8WXG1 361 aa16.31■□□□□ 0.2
PMPCB-201ENST00000249269 ANKS1AQ92625 1134 aa16.31■□□□□ 0.2
PMPCB-201ENST00000249269 SYN2Q92777 582 aaPredicted RBP16.31■□□□□ 0.2
PMPCB-201ENST00000249269 LRRC45Q96CN5 670 aa16.31■□□□□ 0.2
PMPCB-201ENST00000249269 PCDHA4Q9UN74 947 aa16.31■□□□□ 0.2
PMPCB-201ENST00000249269 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.31■□□□□ 0.2
PMPCB-201ENST00000249269 FAM205CA6NFA0 338 aa16.31■□□□□ 0.2
PMPCB-201ENST00000249269 PRKAB2O43741 272 aa16.31■□□□□ 0.2
PMPCB-201ENST00000249269 Q4G0T1 1027 aa16.31■□□□□ 0.2
PMPCB-201ENST00000249269 KDM7AQ6ZMT4 941 aa16.31■□□□□ 0.2
PMPCB-201ENST00000249269 NANOGNBQ7Z5D8 188 aa16.31■□□□□ 0.2
PMPCB-201ENST00000249269 CSGALNACT2Q8N6G5 542 aa16.31■□□□□ 0.2
PMPCB-201ENST00000249269 TCP11Q8WWU5 503 aa16.31■□□□□ 0.2
PMPCB-201ENST00000249269 RGL1Q9NZL6 768 aa16.31■□□□□ 0.2
PMPCB-201ENST00000249269 GNEQ9Y223 722 aaKnown RBP16.31■□□□□ 0.2
PMPCB-201ENST00000249269 BHMG1C9JSJ3 638 aaPredicted RBP16.3■□□□□ 0.2
PMPCB-201ENST00000249269 ENC1O14682 589 aa16.3■□□□□ 0.2
PMPCB-201ENST00000249269 FSBPO95073 299 aa16.3■□□□□ 0.2
PMPCB-201ENST00000249269 MYL3P08590 195 aa16.3■□□□□ 0.2
PMPCB-201ENST00000249269 CYP7A1P22680 504 aa16.3■□□□□ 0.2
PMPCB-201ENST00000249269 YY1P25490 414 aa16.3■□□□□ 0.2
PMPCB-201ENST00000249269 CASP1P29466 404 aa16.3■□□□□ 0.2
PMPCB-201ENST00000249269 ARPC4P59998 168 aa16.3■□□□□ 0.2
PMPCB-201ENST00000249269 CHRNA2Q15822 529 aa16.3■□□□□ 0.2
PMPCB-201ENST00000249269 IL17AQ16552 155 aa16.3■□□□□ 0.2
PMPCB-201ENST00000249269 SBK1Q52WX2 424 aa16.3■□□□□ 0.2
PMPCB-201ENST00000249269 CNNM4Q6P4Q7 775 aa16.3■□□□□ 0.2
PMPCB-201ENST00000249269 DNAJC10Q8IXB1 793 aa16.3■□□□□ 0.2
PMPCB-201ENST00000249269 BRSK1Q8TDC3 778 aa16.3■□□□□ 0.2
PMPCB-201ENST00000249269 BCAS4Q8TDM0 211 aa16.3■□□□□ 0.2
PMPCB-201ENST00000249269 NAP1L3Q99457 506 aaPredicted RBP16.3■□□□□ 0.2
PMPCB-201ENST00000249269 RIOK1Q9BRS2 568 aaKnown RBP16.3■□□□□ 0.2
PMPCB-201ENST00000249269 GRIN2DO15399 1336 aa16.3■□□□□ 0.2
PMPCB-201ENST00000249269 ZNF254O75437 659 aa16.3■□□□□ 0.2
PMPCB-201ENST00000249269 VAMP1P23763 118 aa16.3■□□□□ 0.2
PMPCB-201ENST00000249269 IGHMBP2P38935 993 aaKnown RBP16.3■□□□□ 0.2
PMPCB-201ENST00000249269 PIK3AP1Q6ZUJ8 805 aa16.3■□□□□ 0.2
PMPCB-201ENST00000249269 ALPK1Q96QP1 1244 aa16.3■□□□□ 0.2
PMPCB-201ENST00000249269 ARNT2Q9HBZ2 717 aa16.3■□□□□ 0.2
PMPCB-201ENST00000249269 ATF5Q9Y2D1 282 aaPredicted RBP16.3■□□□□ 0.2
PMPCB-201ENST00000249269 GDAQ9Y2T3 454 aa16.3■□□□□ 0.2
PMPCB-201ENST00000249269 LAMB1P07942 1786 aa16.3■□□□□ 0.2
PMPCB-201ENST00000249269 RBAK-RBAKDNI3L0D1 243 aa16.29■□□□□ 0.2
PMPCB-201ENST00000249269 ENDOUP21128 410 aaKnown RBP16.29■□□□□ 0.2
PMPCB-201ENST00000249269 TCF7P36402 384 aaPredicted RBP16.29■□□□□ 0.2
PMPCB-201ENST00000249269 POLD2P49005 469 aa16.29■□□□□ 0.2
PMPCB-201ENST00000249269 BNIP1Q12981 228 aa16.29■□□□□ 0.2
PMPCB-201ENST00000249269 BOLA3Q53S33 107 aa16.29■□□□□ 0.2
PMPCB-201ENST00000249269 WHAMMQ8TF30 809 aa16.29■□□□□ 0.2
PMPCB-201ENST00000249269 CCDC114Q96M63 670 aa16.29■□□□□ 0.2
PMPCB-201ENST00000249269 TRIM10Q9UDY6 481 aa16.29■□□□□ 0.2
PMPCB-201ENST00000249269 PCDHA13Q9Y5I0 950 aa16.29■□□□□ 0.2
PMPCB-201ENST00000249269 ATP8B3O60423 1300 aa16.29■□□□□ 0.2
PMPCB-201ENST00000249269 CLASP2O75122 1294 aaKnown RBP16.29■□□□□ 0.2
PMPCB-201ENST00000249269 PLEKHA8P1O95397 391 aa16.29■□□□□ 0.2
PMPCB-201ENST00000249269 CYP19A1P11511 503 aaPredicted RBP16.29■□□□□ 0.2
PMPCB-201ENST00000249269 HSD3B2P26439 372 aa16.29■□□□□ 0.2
PMPCB-201ENST00000249269 S100A5P33763 92 aa16.29■□□□□ 0.2
PMPCB-201ENST00000249269 PABPC4Q13310 644 aaKnown RBP eCLIP16.29■□□□□ 0.24e-8■□□□□ 10
PMPCB-201ENST00000249269 LAPTM5Q13571 262 aa16.29■□□□□ 0.2
PMPCB-201ENST00000249269 CFAP221Q4G0U5 840 aa16.29■□□□□ 0.2
PMPCB-201ENST00000249269 BPHLQ86WA6 291 aaPredicted RBP16.29■□□□□ 0.2
PMPCB-201ENST00000249269 ARFGAP2Q8N6H7 521 aa16.29■□□□□ 0.2
PMPCB-201ENST00000249269 OSBPL9Q96SU4 736 aa16.29■□□□□ 0.2
PMPCB-201ENST00000249269 IFIH1Q9BYX4 1025 aaKnown RBP16.29■□□□□ 0.2
PMPCB-201ENST00000249269 LACRTQ9GZZ8 138 aa16.29■□□□□ 0.2
PMPCB-201ENST00000249269 PIH1D1Q9NWS0 290 aaKnown RBP16.29■□□□□ 0.2
PMPCB-201ENST00000249269 MAGED1Q9Y5V3 778 aaPredicted RBP16.29■□□□□ 0.2
PMPCB-201ENST00000249269 M0R2N6 131 aa16.28■□□□□ 0.2
PMPCB-201ENST00000249269 PDE2AO00408 941 aaPredicted RBP16.28■□□□□ 0.2
PMPCB-201ENST00000249269 CASP2P42575 452 aa16.28■□□□□ 0.2
PMPCB-201ENST00000249269 MARSP56192 900 aaKnown RBP16.28■□□□□ 0.2
PMPCB-201ENST00000249269 GNGT1P63211 74 aa16.28■□□□□ 0.2
PMPCB-201ENST00000249269 HLFQ16534 295 aa16.28■□□□□ 0.2
PMPCB-201ENST00000249269 BEND5Q7L4P6 421 aa16.28■□□□□ 0.2
PMPCB-201ENST00000249269 DGKHQ86XP1 1220 aa16.28■□□□□ 0.2
PMPCB-201ENST00000249269 CMTR1Q8N1G2 835 aaKnown RBP16.28■□□□□ 0.2
PMPCB-201ENST00000249269 SRBD1Q8N5C6 995 aaKnown RBP16.28■□□□□ 0.2
PMPCB-201ENST00000249269 ESX1Q8N693 406 aa16.28■□□□□ 0.2
PMPCB-201ENST00000249269 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.28■□□□□ 0.2
PMPCB-201ENST00000249269 TRIM4Q9C037 500 aa16.28■□□□□ 0.2
PMPCB-201ENST00000249269 GDF3Q9NR23 364 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms