RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 SRCAPQ6ZRS2 3230 aa9.04□□□□□ -0.96
SPARC-201ENST00000231061 SOX11P35716 441 aa9.04□□□□□ -0.96
SPARC-201ENST00000231061 AP1B1Q10567 949 aa9.04□□□□□ -0.96
SPARC-201ENST00000231061 HLFQ16534 295 aa9.04□□□□□ -0.96
SPARC-201ENST00000231061 PTPN21Q16825 1174 aa9.04□□□□□ -0.96
SPARC-201ENST00000231061 CEP78Q5JTW2 689 aa9.04□□□□□ -0.96
SPARC-201ENST00000231061 CFAP157Q5JU67 520 aa9.04□□□□□ -0.96
SPARC-201ENST00000231061 SPERTQ8NA61 448 aa9.04□□□□□ -0.96
SPARC-201ENST00000231061 IPMKQ8NFU5 416 aa9.04□□□□□ -0.96
SPARC-201ENST00000231061 NTPCRQ9BSD7 190 aaKnown RBP9.04□□□□□ -0.96
SPARC-201ENST00000231061 DBNDD1Q9H9R9 158 aa9.04□□□□□ -0.96
SPARC-201ENST00000231061 STARD7Q9NQZ5 370 aa9.04□□□□□ -0.96
SPARC-201ENST00000231061 IMPACTQ9P2X3 320 aa9.04□□□□□ -0.96
SPARC-201ENST00000231061 EPN1Q9Y6I3 576 aaPredicted RBP9.04□□□□□ -0.96
SPARC-201ENST00000231061 SH2B2O14492 632 aaPredicted RBP9.04□□□□□ -0.96
SPARC-201ENST00000231061 IRS4O14654 1257 aaPredicted RBP9.04□□□□□ -0.96
SPARC-201ENST00000231061 IFIT3O14879 490 aaKnown RBP9.04□□□□□ -0.96
SPARC-201ENST00000231061 SPTLC1O15269 473 aa9.04□□□□□ -0.96
SPARC-201ENST00000231061 TBC1D12O60347 775 aa9.04□□□□□ -0.96
SPARC-201ENST00000231061 SEC31AO94979 1220 aaKnown RBP9.04□□□□□ -0.96
SPARC-201ENST00000231061 SCGB1D2O95969 90 aa9.04□□□□□ -0.96
SPARC-201ENST00000231061 ATP1A3P13637 1013 aa9.04□□□□□ -0.96
SPARC-201ENST00000231061 PHKA1P46020 1223 aa9.04□□□□□ -0.96
SPARC-201ENST00000231061 KRT83P78385 493 aa9.04□□□□□ -0.96
SPARC-201ENST00000231061 SLC39A14Q15043 492 aa9.04□□□□□ -0.96
SPARC-201ENST00000231061 TTF1Q15361 905 aaPredicted RBP9.04□□□□□ -0.96
SPARC-201ENST00000231061 BEND5Q7L4P6 421 aa9.04□□□□□ -0.96
SPARC-201ENST00000231061 GDAP1Q8TB36 358 aa9.04□□□□□ -0.96
SPARC-201ENST00000231061 NAPBQ9H115 298 aa9.04□□□□□ -0.96
SPARC-201ENST00000231061 ADAM21Q9UKJ8 722 aa9.04□□□□□ -0.96
SPARC-201ENST00000231061 ANGPTL3Q9Y5C1 460 aa9.04□□□□□ -0.96
SPARC-201ENST00000231061 CPDO75976 1380 aa9.03□□□□□ -0.96
SPARC-201ENST00000231061 HTR3EA5X5Y0 456 aa9.03□□□□□ -0.96
SPARC-201ENST00000231061 PDE6AP16499 860 aa9.03□□□□□ -0.96
SPARC-201ENST00000231061 GUCY1A2P33402 732 aa9.03□□□□□ -0.96
SPARC-201ENST00000231061 HADHAP40939 763 aa9.03□□□□□ -0.96
SPARC-201ENST00000231061 GABREP78334 506 aa9.03□□□□□ -0.96
SPARC-201ENST00000231061 CTDSPL2Q05D32 466 aa9.03□□□□□ -0.96
SPARC-201ENST00000231061 LRRC74AQ0VAA2 488 aa9.03□□□□□ -0.96
SPARC-201ENST00000231061 TRIM28Q13263 835 aaKnown RBP9.03□□□□□ -0.96
SPARC-201ENST00000231061 SEMA3AQ14563 771 aa9.03□□□□□ -0.96
SPARC-201ENST00000231061 FAM209AQ5JX71 171 aa9.03□□□□□ -0.96
SPARC-201ENST00000231061 GPATCH4Q5T3I0 446 aaKnown RBP9.03□□□□□ -0.96
SPARC-201ENST00000231061 ARMCX5Q6P1M9 558 aa9.03□□□□□ -0.96
SPARC-201ENST00000231061 APOA5Q6Q788 366 aa9.03□□□□□ -0.96
SPARC-201ENST00000231061 MFSD6Q6ZSS7 791 aa9.03□□□□□ -0.96
SPARC-201ENST00000231061 RSPH3Q86UC2 560 aa9.03□□□□□ -0.96
SPARC-201ENST00000231061 MCF2L2Q86YR7 1114 aa9.03□□□□□ -0.96
SPARC-201ENST00000231061 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.03□□□□□ -0.96
SPARC-201ENST00000231061 REXO1L1PQ8IX06 675 aa9.03□□□□□ -0.96
SPARC-201ENST00000231061 CNNM3Q8NE01 707 aa9.03□□□□□ -0.96
SPARC-201ENST00000231061 DTNBP1Q96EV8 351 aa9.03□□□□□ -0.96
SPARC-201ENST00000231061 UTP14AQ9BVJ6 771 aaKnown RBP9.03□□□□□ -0.96
SPARC-201ENST00000231061 FHOD1Q9Y613 1164 aa9.03□□□□□ -0.96
SPARC-201ENST00000231061 TTLL13PA6NNM8 815 aa9.03□□□□□ -0.96
SPARC-201ENST00000231061 SLU7O95391 586 aaKnown RBP9.03□□□□□ -0.96
SPARC-201ENST00000231061 CTSWP56202 376 aa9.03□□□□□ -0.96
SPARC-201ENST00000231061 LRRTM3Q86VH5 581 aa9.03□□□□□ -0.96
SPARC-201ENST00000231061 FBXL16Q8N461 479 aa9.03□□□□□ -0.96
SPARC-201ENST00000231061 NKX2-3Q8TAU0 364 aa9.03□□□□□ -0.96
SPARC-201ENST00000231061 CFAP36Q96G28 342 aa9.03□□□□□ -0.96
SPARC-201ENST00000231061 PPP1R13BQ96KQ4 1090 aa9.03□□□□□ -0.96
SPARC-201ENST00000231061 COG8Q96MW5 612 aa9.03□□□□□ -0.96
SPARC-201ENST00000231061 APBA2Q99767 749 aa9.03□□□□□ -0.96
SPARC-201ENST00000231061 DNAJC18Q9H819 358 aa9.03□□□□□ -0.96
SPARC-201ENST00000231061 SEPT11Q9NVA2 429 aaKnown RBP9.03□□□□□ -0.96
SPARC-201ENST00000231061 SIRT5Q9NXA8 310 aa9.03□□□□□ -0.96
SPARC-201ENST00000231061 SLC12A7Q9Y666 1083 aa9.03□□□□□ -0.96
SPARC-201ENST00000231061 NEDD4P46934 1319 aa9.03□□□□□ -0.96
SPARC-201ENST00000231061 GOLGA6L9A6NEM1 432 aa9.03□□□□□ -0.96
SPARC-201ENST00000231061 TTI1O43156 1089 aa9.03□□□□□ -0.96
SPARC-201ENST00000231061 ATP5OP48047 213 aa9.03□□□□□ -0.96
SPARC-201ENST00000231061 SLC8A3P57103 927 aa9.03□□□□□ -0.96
SPARC-201ENST00000231061 BPIFB4P59827 614 aa9.03□□□□□ -0.96
SPARC-201ENST00000231061 ZNF362Q5T0B9 420 aaPredicted RBP9.03□□□□□ -0.96
SPARC-201ENST00000231061 FAM83BQ5T0W9 1011 aa9.03□□□□□ -0.96
SPARC-201ENST00000231061 DDX42Q86XP3 938 aaKnown RBP eCLIP9.03□□□□□ -0.96
SPARC-201ENST00000231061 TTLL11Q8NHH1 800 aa9.03□□□□□ -0.96
SPARC-201ENST00000231061 HERVK_113Q902F9 699 aa9.03□□□□□ -0.96
SPARC-201ENST00000231061 TIFAQ96CG3 184 aa9.03□□□□□ -0.96
SPARC-201ENST00000231061 OSBPL2Q9H1P3 480 aa9.03□□□□□ -0.96
SPARC-201ENST00000231061 SLC39A2Q9NP94 309 aa9.03□□□□□ -0.96
SPARC-201ENST00000231061 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.02□□□□□ -0.97
SPARC-201ENST00000231061 UBE2Q2LH0YL09 131 aa9.02□□□□□ -0.97
SPARC-201ENST00000231061 TSPAN9O75954 239 aa9.02□□□□□ -0.97
SPARC-201ENST00000231061 NPPAP01160 153 aa9.02□□□□□ -0.97
SPARC-201ENST00000231061 RHOXF2BP0C7M4 288 aa9.02□□□□□ -0.97
SPARC-201ENST00000231061 RAC2P15153 192 aa9.02□□□□□ -0.97
SPARC-201ENST00000231061 SLC12A2P55011 1212 aa9.02□□□□□ -0.97
SPARC-201ENST00000231061 GJA9P57773 515 aa9.02□□□□□ -0.97
SPARC-201ENST00000231061 DR1Q01658 176 aa9.02□□□□□ -0.97
SPARC-201ENST00000231061 SSRP1Q08945 709 aaKnown RBP9.02□□□□□ -0.97
SPARC-201ENST00000231061 GOLGA8FQ08AF8 430 aa9.02□□□□□ -0.97
SPARC-201ENST00000231061 GOLGA8DPQ0D2H9 430 aa9.02□□□□□ -0.97
SPARC-201ENST00000231061 CCDC102BQ68D86 513 aa9.02□□□□□ -0.97
SPARC-201ENST00000231061 PRR23CQ6ZRP0 262 aa9.02□□□□□ -0.97
SPARC-201ENST00000231061 C2orf69Q8N8R5 385 aa9.02□□□□□ -0.97
SPARC-201ENST00000231061 GIMAP5Q96F15 307 aa9.02□□□□□ -0.97
SPARC-201ENST00000231061 ERO1AQ96HE7 468 aa9.02□□□□□ -0.97
SPARC-201ENST00000231061 RHOXF2Q9BQY4 288 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms