RNA–Protein interactions for RNA: ENST00000227507.2

CCND1-201, Transcript of cyclin D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCND1, Length 4,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-201ENST00000227507 ASIC2Q16515 512 aa12.47□□□□□ -0.41
CCND1-201ENST00000227507 CRY2Q49AN0 593 aa12.47□□□□□ -0.41
CCND1-201ENST00000227507 CCDC38Q502W7 563 aa12.47□□□□□ -0.41
CCND1-201ENST00000227507 KLHDC7AQ5VTJ3 777 aa12.47□□□□□ -0.41
CCND1-201ENST00000227507 DPP9Q86TI2 863 aa12.47□□□□□ -0.41
CCND1-201ENST00000227507 KLHL29Q96CT2 875 aa12.47□□□□□ -0.41
CCND1-201ENST00000227507 ZDHHC15Q96MV8 337 aa12.47□□□□□ -0.41
CCND1-201ENST00000227507 DNAI2Q9GZS0 605 aa12.47□□□□□ -0.41
CCND1-201ENST00000227507 PCDHA4Q9UN74 947 aa12.47□□□□□ -0.41
CCND1-201ENST00000227507 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.47□□□□□ -0.41
CCND1-201ENST00000227507 TACC3Q9Y6A5 838 aa12.47□□□□□ -0.41
CCND1-201ENST00000227507 PNMA6FA0A0J9YX94 578 aa12.47□□□□□ -0.41
CCND1-201ENST00000227507 NKRFO15226 690 aaKnown RBP eCLIP12.47□□□□□ -0.41
CCND1-201ENST00000227507 ABCB4P21439 1286 aa12.47□□□□□ -0.41
CCND1-201ENST00000227507 CACNB1Q02641 598 aaPredicted RBP12.47□□□□□ -0.41
CCND1-201ENST00000227507 OTUD6AQ7L8S5 288 aa12.47□□□□□ -0.41
CCND1-201ENST00000227507 USP37Q86T82 979 aa12.47□□□□□ -0.41
CCND1-201ENST00000227507 OTUD5Q96G74 571 aa12.47□□□□□ -0.41
CCND1-201ENST00000227507 PACSIN1Q9BY11 444 aa12.47□□□□□ -0.41
CCND1-201ENST00000227507 IL17AQ16552 155 aa12.47□□□□□ -0.41
CCND1-201ENST00000227507 MEA1Q16626 185 aa12.47□□□□□ -0.41
CCND1-201ENST00000227507 DCAF17Q5H9S7 520 aaPredicted RBP12.47□□□□□ -0.41
CCND1-201ENST00000227507 FAM83BQ5T0W9 1011 aa12.47□□□□□ -0.41
CCND1-201ENST00000227507 CAPRIN2Q6IMN6 1127 aaKnown RBP12.47□□□□□ -0.41
CCND1-201ENST00000227507 SAAL1Q96ER3 474 aa12.47□□□□□ -0.41
CCND1-201ENST00000227507 CHMP6Q96FZ7 201 aa12.47□□□□□ -0.41
CCND1-201ENST00000227507 PPP1R12CQ9BZL4 782 aa12.47□□□□□ -0.41
CCND1-201ENST00000227507 SPC25Q9HBM1 224 aa12.47□□□□□ -0.41
CCND1-201ENST00000227507 ETAA1Q9NY74 926 aa12.47□□□□□ -0.41
CCND1-201ENST00000227507 PCDHA12Q9UN75 941 aa12.47□□□□□ -0.41
CCND1-201ENST00000227507 TUBGCP6Q96RT7 1819 aa12.46□□□□□ -0.41
CCND1-201ENST00000227507 EME2A4GXA9 379 aaPredicted RBP12.46□□□□□ -0.41
CCND1-201ENST00000227507 ANP32DO95626 131 aa12.46□□□□□ -0.41
CCND1-201ENST00000227507 ITGB3BPQ13352 177 aaPredicted RBP12.46□□□□□ -0.41
CCND1-201ENST00000227507 MAN2A1Q16706 1144 aa12.46□□□□□ -0.41
CCND1-201ENST00000227507 SPRED3Q2MJR0 410 aa12.46□□□□□ -0.41
CCND1-201ENST00000227507 RCSD1Q6JBY9 416 aa12.46□□□□□ -0.41
CCND1-201ENST00000227507 VGLL2Q8N8G2 317 aa12.46□□□□□ -0.41
CCND1-201ENST00000227507 PRMT6Q96LA8 375 aaPredicted RBP12.46□□□□□ -0.41
CCND1-201ENST00000227507 DUSP9Q99956 384 aaKnown RBP12.46□□□□□ -0.41
CCND1-201ENST00000227507 LBHD1Q9BQE6 289 aaPredicted RBP12.46□□□□□ -0.41
CCND1-201ENST00000227507 DCDC2CA8MYV0 355 aa12.46□□□□□ -0.41
CCND1-201ENST00000227507 LACTBP83111 547 aaPredicted RBP12.46□□□□□ -0.41
CCND1-201ENST00000227507 SNX1Q13596 522 aa12.46□□□□□ -0.41
CCND1-201ENST00000227507 PARD3BQ8TEW8 1205 aa12.46□□□□□ -0.41
CCND1-201ENST00000227507 HOXC10Q9NYD6 342 aa12.46□□□□□ -0.41
CCND1-201ENST00000227507 G3BP2Q9UN86 482 aaKnown RBP12.46□□□□□ -0.41
CCND1-201ENST00000227507 DNM3Q9UQ16 869 aa12.46□□□□□ -0.41
CCND1-201ENST00000227507 OR52Z1P0C646 297 aa12.46□□□□□ -0.42
CCND1-201ENST00000227507 FECHP22830 423 aa12.46□□□□□ -0.42
CCND1-201ENST00000227507 COPB2P35606 906 aa12.46□□□□□ -0.42
CCND1-201ENST00000227507 TRAPPC10P48553 1259 aa12.46□□□□□ -0.42
CCND1-201ENST00000227507 MKRN4PQ13434 485 aaPredicted RBP12.46□□□□□ -0.42
CCND1-201ENST00000227507 MTMR3Q13615 1198 aa12.46□□□□□ -0.42
CCND1-201ENST00000227507 ITFG2Q969R8 447 aa12.46□□□□□ -0.42
CCND1-201ENST00000227507 NSRP1Q9H0G5 558 aaKnown RBP12.46□□□□□ -0.42
CCND1-201ENST00000227507 TMBIM4Q9HC24 238 aa12.46□□□□□ -0.42
CCND1-201ENST00000227507 NOD1Q9Y239 953 aa12.46□□□□□ -0.42
CCND1-201ENST00000227507 TTI1O43156 1089 aa12.46□□□□□ -0.42
CCND1-201ENST00000227507 STAG2Q8N3U4 1231 aa12.46□□□□□ -0.42
CCND1-201ENST00000227507 GIMAP8Q8ND71 665 aaPredicted RBP12.46□□□□□ -0.42
CCND1-201ENST00000227507 TMEM39BQ9GZU3 492 aa12.46□□□□□ -0.42
CCND1-201ENST00000227507 CACNA1FO60840 1977 aa12.45□□□□□ -0.42
CCND1-201ENST00000227507 LRP6O75581 1613 aa12.45□□□□□ -0.42
CCND1-201ENST00000227507 ERVK-9P63128 1117 aa12.45□□□□□ -0.42
CCND1-201ENST00000227507 DENND2CQ68D51 928 aa12.45□□□□□ -0.42
CCND1-201ENST00000227507 VPS36Q86VN1 386 aa12.45□□□□□ -0.42
CCND1-201ENST00000227507 SLFN12Q8IYM2 578 aa12.45□□□□□ -0.42
CCND1-201ENST00000227507 NT5C3AQ9H0P0 336 aa12.45□□□□□ -0.42
CCND1-201ENST00000227507 DDX25Q9UHL0 483 aaKnown RBP12.45□□□□□ -0.42
CCND1-201ENST00000227507 KLHL33A6NCF5 533 aa12.45□□□□□ -0.42
CCND1-201ENST00000227507 RASSF9O75901 435 aa12.45□□□□□ -0.42
CCND1-201ENST00000227507 C16orf86Q6ZW13 317 aa12.45□□□□□ -0.42
CCND1-201ENST00000227507 TRIM51Q9BSJ1 452 aa12.45□□□□□ -0.42
CCND1-201ENST00000227507 TRIM9Q9C026 710 aa12.45□□□□□ -0.42
CCND1-201ENST00000227507 GPBP1L1Q9HC44 474 aaPredicted RBP12.45□□□□□ -0.42
CCND1-201ENST00000227507 ADARB2Q9NS39 739 aaKnown RBP12.45□□□□□ -0.42
CCND1-201ENST00000227507 FEM1BQ9UK73 627 aa12.45□□□□□ -0.42
CCND1-201ENST00000227507 MYH8P13535 1937 aa12.45□□□□□ -0.42
CCND1-201ENST00000227507 SPDYE2BA6NHP3 402 aa12.45□□□□□ -0.42
CCND1-201ENST00000227507 SPDYE6P0CI01 402 aa12.45□□□□□ -0.42
CCND1-201ENST00000227507 ATP11AP98196 1134 aa12.45□□□□□ -0.42
CCND1-201ENST00000227507 MIER3Q7Z3K6 550 aa12.45□□□□□ -0.42
CCND1-201ENST00000227507 GLG1Q92896 1179 aa12.45□□□□□ -0.42
CCND1-201ENST00000227507 MTMR4Q9NYA4 1195 aa12.45□□□□□ -0.42
CCND1-201ENST00000227507 RNF14Q9UBS8 474 aa12.45□□□□□ -0.42
CCND1-201ENST00000227507 TRPM3Q9HCF6 1732 aaPredicted RBP12.45□□□□□ -0.42
CCND1-201ENST00000227507 PGRMC1O00264 195 aaKnown RBP12.44□□□□□ -0.42
CCND1-201ENST00000227507 ATP6V1G2O95670 118 aa12.44□□□□□ -0.42
CCND1-201ENST00000227507 PDHA1P08559 390 aa12.44□□□□□ -0.42
CCND1-201ENST00000227507 CHN1P15882 459 aa12.44□□□□□ -0.42
CCND1-201ENST00000227507 DRP2Q13474 957 aa12.44□□□□□ -0.42
CCND1-201ENST00000227507 KCNB1Q14721 858 aa12.44□□□□□ -0.42
CCND1-201ENST00000227507 IFI16Q16666 785 aaKnown RBP12.44□□□□□ -0.42
CCND1-201ENST00000227507 HOOK3Q86VS8 718 aa12.44□□□□□ -0.42
CCND1-201ENST00000227507 NOP53Q9NZM5 478 aaKnown RBP12.44□□□□□ -0.42
CCND1-201ENST00000227507 CCT8L1PA6NM43 557 aa12.44□□□□□ -0.42
CCND1-201ENST00000227507 ZBTB5O15062 677 aa12.44□□□□□ -0.42
CCND1-201ENST00000227507 ADAMTS3O15072 1205 aa12.44□□□□□ -0.42
CCND1-201ENST00000227507 ZNF844Q08AG5 666 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms