RNA–Protein interactions for RNA: ENST00000226359.2

AFP-201, Transcript of alpha fetoprotein, humanhuman

TSL 5 BASIC

Gene AFP, Length 1,914 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-201ENST00000226359 EEPD1Q7L9B9 569 aa6.5□□□□□ -1.37
AFP-201ENST00000226359 ERMP1Q7Z2K6 904 aa6.5□□□□□ -1.37
AFP-201ENST00000226359 FILIP1Q7Z7B0 1213 aa6.5□□□□□ -1.37
AFP-201ENST00000226359 CLEC4DQ8WXI8 215 aa6.5□□□□□ -1.37
AFP-201ENST00000226359 CCDC74AQ96AQ1 378 aa6.5□□□□□ -1.37
AFP-201ENST00000226359 NEK1Q96PY6 1258 aa6.5□□□□□ -1.37
AFP-201ENST00000226359 WDR11Q9BZH6 1224 aa6.5□□□□□ -1.37
AFP-201ENST00000226359 DNAJC25Q9H1X3 360 aa6.5□□□□□ -1.37
AFP-201ENST00000226359 JMJD4Q9H9V9 463 aa6.5□□□□□ -1.37
AFP-201ENST00000226359 ZDHHC3Q9NYG2 299 aa6.5□□□□□ -1.37
AFP-201ENST00000226359 MAD2L2Q9UI95 211 aa6.5□□□□□ -1.37
AFP-201ENST00000226359 PPME1Q9Y570 386 aa6.5□□□□□ -1.37
AFP-201ENST00000226359 COL4A3BPQ9Y5P4 624 aa6.5□□□□□ -1.37
AFP-201ENST00000226359 A0A1B0GTH6 734 aa6.5□□□□□ -1.37
AFP-201ENST00000226359 DYNC1LI2O43237 492 aaPredicted RBP6.5□□□□□ -1.37
AFP-201ENST00000226359 ADAMTS4O75173 837 aa6.5□□□□□ -1.37
AFP-201ENST00000226359 CLTBP09497 229 aa6.5□□□□□ -1.37
AFP-201ENST00000226359 RAG1P15918 1043 aa6.5□□□□□ -1.37
AFP-201ENST00000226359 IBSPP21815 317 aaPredicted RBP6.5□□□□□ -1.37
AFP-201ENST00000226359 CCND2P30279 289 aa6.5□□□□□ -1.37
AFP-201ENST00000226359 LIFRP42702 1097 aa6.5□□□□□ -1.37
AFP-201ENST00000226359 ANAPC15P60006 121 aa6.5□□□□□ -1.37
AFP-201ENST00000226359 GNPTABQ3T906 1256 aa6.5□□□□□ -1.37
AFP-201ENST00000226359 ARSJQ5FYB0 599 aaPredicted RBP6.5□□□□□ -1.37
AFP-201ENST00000226359 C1orf53Q5VUE5 145 aa6.5□□□□□ -1.37
AFP-201ENST00000226359 KCNV1Q6PIU1 500 aa6.5□□□□□ -1.37
AFP-201ENST00000226359 CHST3Q7LGC8 479 aa6.5□□□□□ -1.37
AFP-201ENST00000226359 MORC4Q8TE76 937 aa6.5□□□□□ -1.37
AFP-201ENST00000226359 LENG1Q96BZ8 264 aaPredicted RBP6.5□□□□□ -1.37
AFP-201ENST00000226359 RNPC3Q96LT9 517 aaKnown RBP6.5□□□□□ -1.37
AFP-201ENST00000226359 FGD4Q96M96 766 aa6.5□□□□□ -1.37
AFP-201ENST00000226359 RMDN3Q96TC7 470 aa6.5□□□□□ -1.37
AFP-201ENST00000226359 SPZ1Q9BXG8 430 aa6.5□□□□□ -1.37
AFP-201ENST00000226359 C22orf23Q9BZE7 217 aa6.5□□□□□ -1.37
AFP-201ENST00000226359 CPVLQ9H3G5 476 aa6.5□□□□□ -1.37
AFP-201ENST00000226359 RUBCNLQ9H714 662 aa6.5□□□□□ -1.37
AFP-201ENST00000226359 LY9Q9HBG7 655 aa6.5□□□□□ -1.37
AFP-201ENST00000226359 TMEM39AQ9NV64 488 aa6.5□□□□□ -1.37
AFP-201ENST00000226359 KBTBD4Q9NVX7 518 aa6.5□□□□□ -1.37
AFP-201ENST00000226359 PARP14Q460N5 1801 aa6.49□□□□□ -1.37
AFP-201ENST00000226359 CCDC196A0A1B0GTZ2 297 aa6.49□□□□□ -1.37
AFP-201ENST00000226359 PARNO95453 639 aaKnown RBP6.49□□□□□ -1.37
AFP-201ENST00000226359 ASGR1P07306 291 aa6.49□□□□□ -1.37
AFP-201ENST00000226359 MYL3P08590 195 aa6.49□□□□□ -1.37
AFP-201ENST00000226359 MSX1P28360 303 aa6.49□□□□□ -1.37
AFP-201ENST00000226359 SMARCA1P28370 1054 aa6.49□□□□□ -1.37
AFP-201ENST00000226359 BMP8BP34820 402 aa6.49□□□□□ -1.37
AFP-201ENST00000226359 ETFBP38117 255 aa6.49□□□□□ -1.37
AFP-201ENST00000226359 AKAP17AQ02040 695 aaKnown RBP6.49□□□□□ -1.37
AFP-201ENST00000226359 TLE2Q04725 743 aa6.49□□□□□ -1.37
AFP-201ENST00000226359 SNX17Q15036 470 aa6.49□□□□□ -1.37
AFP-201ENST00000226359 DUSP28Q4G0W2 176 aa6.49□□□□□ -1.37
AFP-201ENST00000226359 STOX1Q6ZVD7 989 aa6.49□□□□□ -1.37
AFP-201ENST00000226359 MICU3Q86XE3 530 aa6.49□□□□□ -1.37
AFP-201ENST00000226359 KLHDC9Q8NEP7 349 aa6.49□□□□□ -1.37
AFP-201ENST00000226359 SMARCC2Q8TAQ2 1214 aa6.49□□□□□ -1.37
AFP-201ENST00000226359 SYTL5Q8TDW5 730 aaPredicted RBP6.49□□□□□ -1.37
AFP-201ENST00000226359 PIBF1Q8WXW3 757 aa6.49□□□□□ -1.37
AFP-201ENST00000226359 TBC1D32Q96NH3 1257 aa6.49□□□□□ -1.37
AFP-201ENST00000226359 PIGSQ96S52 555 aa6.49□□□□□ -1.37
AFP-201ENST00000226359 GAS2L1Q99501 681 aaPredicted RBP6.49□□□□□ -1.37
AFP-201ENST00000226359 MTIF3Q9H2K0 278 aaKnown RBP6.49□□□□□ -1.37
AFP-201ENST00000226359 USP20Q9Y2K6 914 aa6.49□□□□□ -1.37
AFP-201ENST00000226359 DOCK3Q8IZD9 2030 aa6.49□□□□□ -1.37
AFP-201ENST00000226359 COL11A1P12107 1806 aaPredicted RBP6.49□□□□□ -1.37
AFP-201ENST00000226359 GOLGA8AA7E2F4 631 aa6.48□□□□□ -1.37
AFP-201ENST00000226359 GOLGA8BA8MQT2 603 aa6.48□□□□□ -1.37
AFP-201ENST00000226359 ZBTB43O43298 467 aa6.48□□□□□ -1.37
AFP-201ENST00000226359 EPB41L2O43491 1005 aaKnown RBP6.48□□□□□ -1.37
AFP-201ENST00000226359 EIF3JO75822 258 aaKnown RBP6.48□□□□□ -1.37
AFP-201ENST00000226359 GH1P01241 217 aa6.48□□□□□ -1.37
AFP-201ENST00000226359 SSBP05455 408 aaKnown RBP eCLIP6.48□□□□□ -1.37
AFP-201ENST00000226359 TXNP10599 105 aaKnown RBP6.48□□□□□ -1.37
AFP-201ENST00000226359 MYCLP12524 364 aaPredicted RBP6.48□□□□□ -1.37
AFP-201ENST00000226359 PCSK2P16519 638 aa6.48□□□□□ -1.37
AFP-201ENST00000226359 EIF2AK2P19525 551 aaKnown RBP6.48□□□□□ -1.37
AFP-201ENST00000226359 EDNRBP24530 442 aa6.48□□□□□ -1.37
AFP-201ENST00000226359 RCAN1P53805 252 aa6.48□□□□□ -1.37
AFP-201ENST00000226359 ANTXR2P58335 489 aa6.48□□□□□ -1.37
AFP-201ENST00000226359 TROAPQ12815 778 aa6.48□□□□□ -1.37
AFP-201ENST00000226359 NECTIN1Q15223 517 aa6.48□□□□□ -1.37
AFP-201ENST00000226359 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.48□□□□□ -1.374e-55■□□□□ 9.8
AFP-201ENST00000226359 WDR44Q5JSH3 913 aa6.48□□□□□ -1.37
AFP-201ENST00000226359 RNF187Q5TA31 235 aaPredicted RBP6.48□□□□□ -1.37
AFP-201ENST00000226359 BLOC1S2Q6QNY1 142 aa6.48□□□□□ -1.37
AFP-201ENST00000226359 NXPE4Q6UWF7 544 aa6.48□□□□□ -1.37
AFP-201ENST00000226359 LRRC69Q6ZNQ3 347 aa6.48□□□□□ -1.37
AFP-201ENST00000226359 SEPT14Q6ZU15 432 aa6.48□□□□□ -1.37
AFP-201ENST00000226359 DHX32Q7L7V1 743 aaKnown RBP6.48□□□□□ -1.37
AFP-201ENST00000226359 TDHQ8IZJ6 230 aa6.48□□□□□ -1.37
AFP-201ENST00000226359 CCDC155Q8N6L0 562 aa6.48□□□□□ -1.37
AFP-201ENST00000226359 MTMR8Q96EF0 704 aa6.48□□□□□ -1.37
AFP-201ENST00000226359 SUSD3Q96L08 255 aa6.48□□□□□ -1.37
AFP-201ENST00000226359 TOX2Q96NM4 488 aa6.48□□□□□ -1.37
AFP-201ENST00000226359 MTG1Q9BT17 334 aaPredicted RBP6.48□□□□□ -1.37
AFP-201ENST00000226359 KATNAL1Q9BW62 490 aa6.48□□□□□ -1.37
AFP-201ENST00000226359 GLT8D2Q9H1C3 349 aa6.48□□□□□ -1.37
AFP-201ENST00000226359 RIOX1Q9H6W3 641 aa6.48□□□□□ -1.37
AFP-201ENST00000226359 PDLIM7Q9NR12 457 aa6.48□□□□□ -1.37
AFP-201ENST00000226359 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms