RNA–Protein interactions for RNA: ENSMUST00000201711.3

Pdgfra-205, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 4,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-205ENSMUST00000201711 Epc2Q8C0I4 808 aa14.31□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Gprc5cQ8K3J9 440 aa14.31□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Snx24Q9CRB0 169 aa14.31□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Bbs5Q9CZQ9 341 aa14.31□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Gyg1Q9R062 333 aa14.31□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Sept3Q9Z1S5 350 aa14.31□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Rnaseh1O70338 285 aa14.31□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 CtshP49935 333 aa14.31□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Mcl1P97287 331 aa14.31□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Etv6P97360 485 aa14.31□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 NfibP97863 570 aaKnown RBP14.31□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 TchpQ3TVW5 497 aa14.31□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Nr1d1Q3UV55 615 aa14.31□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Znf652Q5DU09 608 aa14.31□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Acbd5Q5XG73 508 aa14.31□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Adcy2Q80TL1 1090 aa14.31□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Spata21Q8BHW6 681 aa14.31□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 DtnbO70585 659 aa14.31□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Cyp11b1Q3TG86 501 aa14.31□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Miga1Q4QQM5 600 aa14.31□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Ehbp1Q69ZW3 1231 aa14.31□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Ankrd24Q80VM7 985 aa14.31□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 TbckQ8BM85 762 aa14.31□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Slc26a7Q8R2Z3 656 aa14.31□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Tmem39aQ9CYC3 486 aa14.31□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Ccdc91Q9D8L5 442 aa14.31□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Kcnh7Q9ER47 1195 aa14.31□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Tnip1Q9WUU8 647 aa14.31□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Lmnb1P14733 588 aaKnown RBP14.3□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Rps6P62754 249 aaKnown RBP14.3□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Birc2Q62210 612 aa14.3□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Krt77Q6IFZ6 572 aa14.3□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Pip5kl1Q6U7H8 395 aa14.3□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Slc9c1Q6UJY2 1175 aa14.3□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Krt20Q9D312 431 aa14.3□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Arl2bpQ9D385 163 aa14.3□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Stk32bQ9JJX8 414 aa14.3□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Cdc42ep4Q9JM96 349 aaKnown RBP14.3□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Col4a1P02463 1669 aa14.3□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Mdm4O35618 489 aa14.3□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Magea6O89010 325 aa14.3□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Adcy8P97490 1249 aa14.3□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Adam6bQ6IMH7 756 aa14.3□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Magea3Q6T340 320 aa14.3□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Ildr1Q8CBR1 537 aa14.3□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Tacc3Q9JJ11 631 aa14.3□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Krt36B1AQ75 473 aa14.3□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Gm8994E9PV04 411 aaKnown RBP14.3□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Pik3r1P26450 724 aa14.3□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 NyxP83503 476 aa14.3□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Nell2Q61220 819 aa14.3□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Rassf10Q8BL43 508 aa14.3□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Reep2Q8VCD6 254 aa14.3□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Pcdhgb4Q91XX6 912 aa14.3□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Grtp1Q9D3N8 359 aa14.3□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 IqcdQ9D3V1 458 aa14.3□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Spata17Q9D552 379 aa14.3□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Trim10Q9WUH5 489 aa14.3□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Cst8P32766 142 aa14.29□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Bank1Q80VH0 783 aa14.29□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Kiaa0391Q8JZY4 584 aaKnown RBP14.29□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Sh2b1Q91ZM2 756 aa14.29□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 HlcsQ920N2 722 aa14.29□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Scyl1Q9EQC5 806 aaKnown RBP14.29□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Ccdc88cQ6VGS5 2009 aa14.29□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 March10E9PX79 788 aa14.29□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Slc16a2O70324 545 aa14.29□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Klrg2Q3UM83 387 aa14.29□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Best3Q6H1V1 669 aa14.29□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Pnma1Q8C1C8 353 aa14.29□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Dnajc7Q9QYI3 494 aa14.29□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Epha7Q61772 998 aa14.29□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Dennd2aQ8C4S8 1000 aa14.29□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 YwhabQ9CQV8 246 aaKnown RBP14.29□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Extl2Q9ES89 330 aa14.29□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Rpf2Q9JJ80 306 aaKnown RBP14.29□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Usp14Q9JMA1 493 aaKnown RBP14.29□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Sesn2P58043 480 aa14.28□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Lrrc1Q80VQ1 524 aa14.28□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Proser2Q8C5R2 471 aa14.28□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Klhl11Q8CE33 709 aa14.28□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Atp6v0a4Q920R6 833 aa14.28□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Dnajc19Q9CQV7 116 aa14.28□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Tmco5aQ9D9D5 303 aa14.28□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Clcn6O35454 870 aa14.28□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Runx2Q08775 607 aa14.28□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Ccdc125Q5U465 500 aa14.28□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 IgflQ6B9Z0 140 aa14.28□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Znf76Q8BMU0 568 aa14.28□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Nemp2Q8CB65 421 aa14.28□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Tpd52l2Q9CYZ2 220 aaKnown RBP14.28□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 LxnP70202 222 aa14.28□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Pde1bQ01065 535 aa14.28□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Cfap52Q5F201 620 aa14.28□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 WdpcpQ8C456 722 aa14.28□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Scfd2Q8BTY8 684 aa14.27□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Usp27Q8CEG8 438 aa14.27□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Olfr390Q8VEZ7 311 aa14.27□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 Mxra7Q9CZH7 178 aa14.27□□□□□ -0.12
Pdgfra-205ENSMUST00000201711 ArpinQ9D0A3 226 aa14.27□□□□□ -0.12
Retrieved 100 of 22,080 RNA–protein pairs in 27.2 ms