RNA–Protein interactions for RNA: ENSMUST00000111051.9

Bdnf-210, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 4,125 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-210ENSMUST00000111051 Rgs9bpQ148R9 237 aa9.05□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Gm5168Q4KL04 211 aa9.05□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Vps41Q5KU39 853 aa9.05□□□□□ -0.96
Bdnf-210ENSMUST00000111051 SugctQ7TNE1 436 aa9.05□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Lonp1Q8CGK3 949 aaKnown RBP9.05□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Sgms1Q8VCQ6 419 aa9.05□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Xpo6Q924Z6 1125 aa9.05□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Gimap4Q99JY3 219 aa9.05□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Thap12Q9CUX1 758 aa9.05□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Serpina9Q9D7D2 418 aa9.05□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Styxl1Q9DAR2 321 aa9.05□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Krt7Q9DCV7 457 aa9.05□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Gm28036V9GXJ1 658 aa9.05□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Gm45194A0A140LJG2 572 aa9.05□□□□□ -0.96
Bdnf-210ENSMUST00000111051 4933406M09RikG3XA12 479 aa9.05□□□□□ -0.96
Bdnf-210ENSMUST00000111051 MybP06876 636 aa9.05□□□□□ -0.96
Bdnf-210ENSMUST00000111051 LdhbP16125 334 aaKnown RBP9.05□□□□□ -0.96
Bdnf-210ENSMUST00000111051 HelqQ2VPA6 1069 aa9.05□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Ccdc160Q3UYG1 323 aa9.05□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Gigyf2Q6Y7W8 1291 aaKnown RBP9.05□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Tmem132dQ76HP3 1097 aa9.05□□□□□ -0.96
Bdnf-210ENSMUST00000111051 SucoQ8C341 1250 aa9.05□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Zfp446Q8C9M8 523 aa9.05□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Ints9Q8K114 658 aaKnown RBP9.05□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Tut1Q8R3F9 869 aa9.05□□□□□ -0.96
Bdnf-210ENSMUST00000111051 MgarpQ8VI64 283 aa9.05□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Coa7Q921H9 231 aa9.05□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Ccdc13D3YV10 709 aa9.04□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Gimap9G3X987 291 aa9.04□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Lig1P37913 916 aa9.04□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Pde1bQ01065 535 aa9.04□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Rasip1Q3U0S6 961 aa9.04□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Ccdc110Q3V125 848 aa9.04□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Large2Q5XPT3 690 aa9.04□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Gga2Q6P5E6 603 aa9.04□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Stoml1Q8CI66 399 aa9.04□□□□□ -0.96
Bdnf-210ENSMUST00000111051 AagabQ8R2R3 316 aa9.04□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Tor1aip1Q921T2 595 aaKnown RBP9.04□□□□□ -0.96
Bdnf-210ENSMUST00000111051 HgsQ99LI8 775 aa9.04□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Cdca7Q9D0M2 382 aa9.04□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Arhgef7Q9ES28 862 aa9.04□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Zmym2Q9CU65 1376 aa9.04□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Lrrc38A2VDH3 298 aa9.04□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Mmrn2A6H6E2 943 aa9.04□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Lonrf2B2RT44 518 aa9.04□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Gm7995L7N2E4 160 aa9.04□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Serpinb8O08800 374 aaKnown RBP9.04□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Sema4dO09126 861 aa9.04□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Cbfa2t2O70374 594 aa9.04□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Siah1aP61092 282 aa9.04□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Slc2a13Q3UHK1 637 aa9.04□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Ccdc51Q3URS9 406 aa9.04□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Fam81aQ3UXZ6 364 aa9.04□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Luc7l3Q5SUF2 432 aaKnown RBP9.04□□□□□ -0.96
Bdnf-210ENSMUST00000111051 AlcamQ61490 583 aa9.04□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Pacsin1Q61644 441 aa9.04□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Zbtb39Q6PDK0 712 aa9.04□□□□□ -0.96
Bdnf-210ENSMUST00000111051 AsphQ8BSY0 741 aa9.04□□□□□ -0.96
Bdnf-210ENSMUST00000111051 C1qtnf12Q8R2Z0 308 aa9.04□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Golph3Q9CRA5 298 aa9.04□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Thumpd2Q9CZB3 528 aa9.04□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Xab2Q9DCD2 855 aaKnown RBP9.04□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Tbx18Q9EPZ6 613 aa9.04□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Hyou1Q9JKR6 999 aaKnown RBP9.04□□□□□ -0.96
Bdnf-210ENSMUST00000111051 BcorQ8CGN4 1759 aa9.04□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Gm13023A2A8N2 498 aa9.04□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Slc35g2D3YVE8 412 aa9.04□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Gm8994E9PV04 411 aaKnown RBP9.04□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Tmem165P52875 323 aa9.04□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Stmn2P55821 179 aa9.04□□□□□ -0.96
Bdnf-210ENSMUST00000111051 DccP70211 1447 aa9.04□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Dok7Q18PE0 504 aa9.04□□□□□ -0.96
Bdnf-210ENSMUST00000111051 HrQ61645 1182 aa9.04□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Ccdc169Q8BXX9 214 aa9.04□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Epha10Q8BYG9 1007 aa9.04□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Apol9bQ8C7I4 310 aa9.04□□□□□ -0.96
Bdnf-210ENSMUST00000111051 GanQ8CA72 597 aa9.04□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Apol9aQ8VDU3 310 aa9.04□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Tnpo2Q99LG2 887 aaKnown RBP9.04□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Mrps22Q9CXW2 359 aa9.04□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Eya4Q9Z191 616 aa9.04□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Col3a1P08121 1464 aa9.04□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Rnf216P58283 853 aa9.03□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Tex11Q14AT2 947 aa9.03□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Acot6Q32Q92 419 aa9.03□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Ttbk2Q3UVR3 1243 aa9.03□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Cnga4Q3UW12 575 aa9.03□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Lamc2Q61092 1191 aa9.03□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Ddx31Q6NZQ2 687 aaKnown RBP9.03□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Arhgef19Q8BWA8 802 aa9.03□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Sh3bp5lQ99LH9 392 aa9.03□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Mrpl11Q9CQF0 192 aaKnown RBP9.03□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Usp31E9Q6Y8 1344 aa9.03□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Exoc4O35382 975 aa9.03□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Prl2c2P04095 224 aa9.03□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Krt42Q6IFX2 452 aa9.03□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Atp2b4Q6Q477 1205 aa9.03□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Suds3Q8BR65 328 aa9.03□□□□□ -0.96
Bdnf-210ENSMUST00000111051 OtoaQ8K561 1137 aa9.03□□□□□ -0.96
Bdnf-210ENSMUST00000111051 Trpm8Q8R4D5 1104 aa9.03□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 14.1 ms