RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Tpm1P58771 284 aa23.26■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 RenbpP82343 430 aa23.26■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Casp7P97864 303 aa23.26■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Atp9bP98195 1146 aa23.26■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Ogfod1Q3U0K8 545 aa23.26■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Zfp957Q3UT76 567 aa23.26■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Adamts18Q4VC17 1219 aa23.26■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Podnl1Q6P3Y9 559 aa23.26■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 E2f7Q6S7F2 904 aa23.26■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 PdgfcQ8CI19 345 aa23.26■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 1700129C05RikQ9CQ77 218 aa23.26■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Ndst4Q9EQW8 872 aa23.26■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Mtmr1Q9Z2C4 669 aa23.26■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Klhdc7aA2APT9 773 aa23.25■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 AU015836B2RUM3 263 aa23.25■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Diaph1O08808 1255 aa23.25■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Nck2O55033 380 aa23.25■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Mt-CybP00158 381 aa23.25■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Irf3P70671 419 aa23.25■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Tmem35bQ3U0Y2 150 aa23.25■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Cdc14aQ6GQT0 603 aa23.25■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Plppr4Q7TME0 766 aa23.25■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Chtf18Q8BIW9 969 aa23.25■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Atp2a1Q8R429 994 aa23.25■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Q9CYI0 393 aa23.25■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Gm5580A0A0N4SVP8 411 aa23.25■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Gm1993A6X8I0 212 aa23.25■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 SlxD3Z347 212 aa23.25■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Gml2G5E8L7 176 aa23.25■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Myo1aO88329 1043 aa23.25■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Il2rbP16297 539 aa23.25■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 RdxP26043 583 aaKnown RBP23.25■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Zbtb5Q7TQG0 670 aa23.25■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 TbataQ7TSD4 393 aa23.25■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Ankrd24Q80VM7 985 aa23.25■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Dusp4Q8BFV3 398 aa23.25■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Nim1kQ8BHI9 436 aa23.25■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Amer2Q8CCJ4 672 aa23.25■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Lpin2Q99PI5 893 aa23.25■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Adgrf4Q9D2L6 698 aa23.25■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Dennd4aE9Q8V6 1869 aa23.24■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Hspa8P63017 646 aaKnown RBP23.24■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Clul1Q3ZRW6 464 aa23.24■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Kiaa1211Q5PR69 1207 aa23.24■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Ctnna3Q65CL1 895 aa23.24■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Necab1Q8BG18 352 aa23.24■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Ccz1Q8C1Y8 480 aa23.24■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Rcor2Q8C796 523 aa23.24■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Sgms1Q8VCQ6 419 aa23.24■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Tgs1Q923W1 853 aa23.24■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 NptxrQ99J85 493 aa23.24■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Emc2Q9CRD2 297 aa23.24■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Eef1gQ9D8N0 437 aaKnown RBP23.24■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Nudt5Q9JKX6 218 aa23.24■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Gtf2bP62915 316 aa23.23■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Cntnap5bQ0V8T8 1292 aa23.23■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Ces5aQ6AW46 575 aa23.23■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Xpnpep1Q6P1B1 623 aa23.23■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Brd3Q8K2F0 726 aaKnown RBP23.23■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Trib2Q8K4K3 343 aa23.23■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Tspan8Q8R3G9 235 aa23.23■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Pkp2Q9CQ73 795 aaKnown RBP23.23■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Apopt1Q9CQW7 192 aa23.23■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Eif4e3Q9DBB5 207 aa23.23■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Uso1Q9Z1Z0 959 aaKnown RBP23.23■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Gm7086A0A1W2P766 342 aa23.22■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Heatr4E9Q357 955 aa23.22■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Gm3138K7N754 218 aa23.22■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Zc3h18Q0P678 948 aaKnown RBP23.22■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Arhgap1Q5FWK3 439 aa23.22■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 EregQ61521 162 aa23.22■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Srd5a1Q68FF9 255 aa23.22■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Rhbdf1Q6PIX5 856 aa23.22■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Mindy1Q76LS9 468 aa23.22■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 NkrfQ8BY02 690 aaKnown RBP23.22■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Med15Q924H2 789 aa23.22■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Mfap3lQ9D3X9 409 aa23.22■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Gm9857F7CXR1 130 aa23.22■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Taf4bG5E8Z2 855 aa23.22■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 SarsP26638 512 aaKnown RBP23.22■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Ccnd2P30280 289 aa23.22■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Dnm2P39054 870 aaKnown RBP23.22■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Mtmr10Q7TPM9 771 aa23.22■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 PodnQ7TQ62 611 aa23.22■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Polr3fQ921X6 316 aa23.22■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 CenpqQ9CPQ5 267 aa23.22■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Galnt15Q9D2N8 638 aa23.22■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Gm15262A0A140LIQ5 728 aa23.21■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Zfand4D3Z3C6 739 aa23.21■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Fgd3O88842 733 aa23.21■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Apba3O88888 571 aa23.21■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Frmd8Q3UFK8 466 aa23.21■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Capn13Q3UW68 665 aa23.21■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Fam189a2Q4FZH1 290 aa23.21■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Ovgp1Q62010 721 aa23.21■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Fbxo44Q8BK26 255 aa23.21■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Ppme1Q8BVQ5 386 aa23.21■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 SucoQ8C341 1250 aa23.21■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Fam155aQ8CCS2 467 aa23.21■■□□□ 1.31
Ccdc88a-202ENSMUST00000109477 Rnf208Q8K0W3 265 aa23.21■■□□□ 1.31
Retrieved 100 of 22,080 RNA–protein pairs in 17.8 ms