RNA–Protein interactions for RNA: ENSMUST00000108593.7

Ctdnep1-201, Transcript of CTD nuclear envelope phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdnep1, Length 1,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1-201ENSMUST00000108593 BccipQ9CWI3 316 aa33.68■■■□□ 2.98
Ctdnep1-201ENSMUST00000108593 Polr3eQ9CZT4 710 aa33.68■■■□□ 2.98
Ctdnep1-201ENSMUST00000108593 Lrp2bpQ9D4C6 346 aa33.68■■■□□ 2.98
Ctdnep1-201ENSMUST00000108593 TnmdQ9EP64 317 aa33.68■■■□□ 2.98
Ctdnep1-201ENSMUST00000108593 Fut2Q9JL27 347 aa33.68■■■□□ 2.98
Ctdnep1-201ENSMUST00000108593 Pcdh11xF6ZNL5 1338 aa33.68■■■□□ 2.98
Ctdnep1-201ENSMUST00000108593 Cul4bA2A432 970 aaKnown RBP33.68■■■□□ 2.98
Ctdnep1-201ENSMUST00000108593 P01644 108 aa33.68■■■□□ 2.98
Ctdnep1-201ENSMUST00000108593 P01645 108 aa33.68■■■□□ 2.98
Ctdnep1-201ENSMUST00000108593 P01646 108 aa33.68■■■□□ 2.98
Ctdnep1-201ENSMUST00000108593 P01647 108 aa33.68■■■□□ 2.98
Ctdnep1-201ENSMUST00000108593 Cd72P21855 354 aa33.68■■■□□ 2.98
Ctdnep1-201ENSMUST00000108593 Cd86P42082 309 aa33.68■■■□□ 2.98
Ctdnep1-201ENSMUST00000108593 CiitaP79621 1155 aa33.68■■■□□ 2.98
Ctdnep1-201ENSMUST00000108593 Tcf12Q61286 706 aa33.68■■■□□ 2.98
Ctdnep1-201ENSMUST00000108593 IgflQ6B9Z0 140 aa33.68■■■□□ 2.98
Ctdnep1-201ENSMUST00000108593 Nudt16Q6P3D0 195 aa33.68■■■□□ 2.98
Ctdnep1-201ENSMUST00000108593 Caps2Q8BUG5 550 aa33.68■■■□□ 2.98
Ctdnep1-201ENSMUST00000108593 Pcdhb15Q91Y04 786 aa33.68■■■□□ 2.98
Ctdnep1-201ENSMUST00000108593 Akt3Q9WUA6 479 aa33.68■■■□□ 2.98
Ctdnep1-201ENSMUST00000108593 Wnt8bQ9WUD6 350 aa33.68■■■□□ 2.98
Ctdnep1-201ENSMUST00000108593 Tmem131O70472 1877 aa33.67■■■□□ 2.98
Ctdnep1-201ENSMUST00000108593 Cyp11b2P15539 500 aa33.67■■■□□ 2.98
Ctdnep1-201ENSMUST00000108593 Rrp1P56183 494 aaKnown RBP33.67■■■□□ 2.98
Ctdnep1-201ENSMUST00000108593 Pcmtd1P59913 357 aa33.67■■■□□ 2.98
Ctdnep1-201ENSMUST00000108593 Srebf2Q3U1N2 1130 aa33.67■■■□□ 2.98
Ctdnep1-201ENSMUST00000108593 Ntan1Q64311 310 aa33.67■■■□□ 2.98
Ctdnep1-201ENSMUST00000108593 Upb1Q8VC97 393 aa33.67■■■□□ 2.98
Ctdnep1-201ENSMUST00000108593 Q9CYI0 393 aa33.67■■■□□ 2.98
Ctdnep1-201ENSMUST00000108593 Dusp10Q9ESS0 483 aa33.67■■■□□ 2.98
Ctdnep1-201ENSMUST00000108593 Asah2Q9JHE3 756 aa33.67■■■□□ 2.98
Ctdnep1-201ENSMUST00000108593 CluhQ5SW19 1315 aa33.67■■■□□ 2.98
Ctdnep1-201ENSMUST00000108593 Gm7168A0AUV4 508 aa33.66■■■□□ 2.98
Ctdnep1-201ENSMUST00000108593 Nol4P60954 483 aa33.66■■■□□ 2.98
Ctdnep1-201ENSMUST00000108593 Ccdc15Q8C9M2 810 aa33.66■■■□□ 2.98
Ctdnep1-201ENSMUST00000108593 Wrap53Q8VC51 532 aa33.66■■■□□ 2.98
Ctdnep1-201ENSMUST00000108593 RnmtQ9D0L8 465 aaKnown RBP33.66■■■□□ 2.98
Ctdnep1-201ENSMUST00000108593 Supt3B0QZW4 406 aa33.65■■■□□ 2.98
Ctdnep1-201ENSMUST00000108593 Capn13Q3UW68 665 aa33.65■■■□□ 2.98
Ctdnep1-201ENSMUST00000108593 Dusp4Q8BFV3 398 aa33.65■■■□□ 2.98
Ctdnep1-201ENSMUST00000108593 Git2Q9JLQ2 708 aa33.65■■■□□ 2.98
Ctdnep1-201ENSMUST00000108593 Krt14Q61781 484 aa33.64■■■□□ 2.98
Ctdnep1-201ENSMUST00000108593 Rexo1Q7TT28 1213 aa33.64■■■□□ 2.98
Ctdnep1-201ENSMUST00000108593 Slc38a7Q8BWH0 463 aa33.64■■■□□ 2.98
Ctdnep1-201ENSMUST00000108593 PpihQ9D868 188 aa33.64■■■□□ 2.98
Ctdnep1-201ENSMUST00000108593 PdcQ9QW08 244 aa33.64■■■□□ 2.98
Ctdnep1-201ENSMUST00000108593 Foxe3Q9QY14 288 aa33.64■■■□□ 2.98
Ctdnep1-201ENSMUST00000108593 Large1Q9Z1M7 756 aa33.64■■■□□ 2.98
Ctdnep1-201ENSMUST00000108593 Bpifb4A2BGH0 617 aa33.64■■■□□ 2.98
Ctdnep1-201ENSMUST00000108593 DgkkE9Q7N4 1118 aa33.64■■■□□ 2.98
Ctdnep1-201ENSMUST00000108593 Orc4O88708 433 aa33.64■■■□□ 2.98
Ctdnep1-201ENSMUST00000108593 P4hbP09103 509 aaKnown RBP33.64■■■□□ 2.98
Ctdnep1-201ENSMUST00000108593 Q5XFZ0 217 aa33.64■■■□□ 2.98
Ctdnep1-201ENSMUST00000108593 Drc7Q6V3W6 876 aa33.64■■■□□ 2.98
Ctdnep1-201ENSMUST00000108593 Slc15a5Q8CBB2 566 aa33.64■■■□□ 2.98
Ctdnep1-201ENSMUST00000108593 Vopp1Q8R1C3 172 aa33.64■■■□□ 2.98
Ctdnep1-201ENSMUST00000108593 Pls3Q99K51 630 aa33.64■■■□□ 2.98
Ctdnep1-201ENSMUST00000108593 Tnpo2Q99LG2 887 aaKnown RBP33.64■■■□□ 2.98
Ctdnep1-201ENSMUST00000108593 Atp6ap2Q9CYN9 350 aa33.64■■■□□ 2.98
Ctdnep1-201ENSMUST00000108593 Cndp2Q9D1A2 475 aaKnown RBP33.64■■■□□ 2.98
Ctdnep1-201ENSMUST00000108593 Rsph3bQ9DA80 389 aa33.64■■■□□ 2.98
Ctdnep1-201ENSMUST00000108593 Tbx18Q9EPZ6 613 aa33.64■■■□□ 2.98
Ctdnep1-201ENSMUST00000108593 Msl3Q9WVG9 525 aa33.64■■■□□ 2.98
Ctdnep1-201ENSMUST00000108593 Gm12800B1AUV4 484 aa33.63■■■□□ 2.97
Ctdnep1-201ENSMUST00000108593 Gm12794L7MTS5 483 aa33.63■■■□□ 2.97
Ctdnep1-201ENSMUST00000108593 IppP28575 584 aa33.63■■■□□ 2.97
Ctdnep1-201ENSMUST00000108593 Mark2Q05512 776 aa33.63■■■□□ 2.97
Ctdnep1-201ENSMUST00000108593 SPINDOCQ05AH6 381 aa33.63■■■□□ 2.97
Ctdnep1-201ENSMUST00000108593 Adgrg3Q8R0T6 542 aa33.63■■■□□ 2.97
Ctdnep1-201ENSMUST00000108593 Enox2Q8R0Z2 598 aa33.63■■■□□ 2.97
Ctdnep1-201ENSMUST00000108593 Prl2c5Q9JLV9 222 aa33.63■■■□□ 2.97
Ctdnep1-201ENSMUST00000108593 Hebp1Q9R257 190 aa33.63■■■□□ 2.97
Ctdnep1-201ENSMUST00000108593 Vnn1Q9Z0K8 512 aa33.63■■■□□ 2.97
Ctdnep1-201ENSMUST00000108593 Kif26aQ52KG5 1881 aa33.62■■■□□ 2.97
Ctdnep1-201ENSMUST00000108593 Zfp984A2A7A2 547 aa33.62■■■□□ 2.97
Ctdnep1-201ENSMUST00000108593 1700018F24RikB2RW27 314 aa33.62■■■□□ 2.97
Ctdnep1-201ENSMUST00000108593 Syce2Q505B8 171 aa33.62■■■□□ 2.97
Ctdnep1-201ENSMUST00000108593 Ppp2r5aQ6PD03 486 aa33.62■■■□□ 2.97
Ctdnep1-201ENSMUST00000108593 FcrlaQ920A9 352 aa33.62■■■□□ 2.97
Ctdnep1-201ENSMUST00000108593 Dhx30Q99PU8 1217 aaKnown RBP33.62■■■□□ 2.97
Ctdnep1-201ENSMUST00000108593 Map2k5Q9WVS7 448 aa33.62■■■□□ 2.97
Ctdnep1-201ENSMUST00000108593 Cdc27A2A6Q5 825 aa33.61■■■□□ 2.97
Ctdnep1-201ENSMUST00000108593 Gm8909G3UXE9 396 aa33.61■■■□□ 2.97
Ctdnep1-201ENSMUST00000108593 Apol10bG3X9K7 334 aa33.61■■■□□ 2.97
Ctdnep1-201ENSMUST00000108593 Cep135Q6P5D4 1140 aa33.61■■■□□ 2.97
Ctdnep1-201ENSMUST00000108593 Herc4Q6PAV2 1057 aa33.61■■■□□ 2.97
Ctdnep1-201ENSMUST00000108593 Fam109aQ8BH49 266 aa33.61■■■□□ 2.97
Ctdnep1-201ENSMUST00000108593 Ehd2Q8BH64 543 aa33.61■■■□□ 2.97
Ctdnep1-201ENSMUST00000108593 Ushbp1Q8R370 680 aa33.61■■■□□ 2.97
Ctdnep1-201ENSMUST00000108593 Q922R1 422 aa33.61■■■□□ 2.97
Ctdnep1-201ENSMUST00000108593 Sppl3Q9CUS9 384 aa33.61■■■□□ 2.97
Ctdnep1-201ENSMUST00000108593 Tbkbp1A2A9T0 611 aa33.61■■■□□ 2.97
Ctdnep1-201ENSMUST00000108593 Gm13941A2AJ38 245 aa33.61■■■□□ 2.97
Ctdnep1-201ENSMUST00000108593 Lrrc38A2VDH3 298 aa33.61■■■□□ 2.97
Ctdnep1-201ENSMUST00000108593 Otud7bB2RUR8 840 aa33.61■■■□□ 2.97
Ctdnep1-201ENSMUST00000108593 AcrP23578 436 aa33.61■■■□□ 2.97
Ctdnep1-201ENSMUST00000108593 Cdca2Q14B71 982 aaKnown RBP33.61■■■□□ 2.97
Ctdnep1-201ENSMUST00000108593 Ttc7aQ8BGB2 858 aa33.61■■■□□ 2.97
Ctdnep1-201ENSMUST00000108593 Lrch3Q8BVU0 778 aa33.61■■■□□ 2.97
Ctdnep1-201ENSMUST00000108593 VasnQ9CZT5 673 aa33.61■■■□□ 2.97
Retrieved 100 of 22,080 RNA–protein pairs in 17.4 ms