RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Q6PD19 689 aa10.64□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Slc12a6Q924N4 1150 aa10.64□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Snx24Q9CRB0 169 aa10.64□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Ctnnbl1Q9CWL8 563 aaKnown RBP10.64□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Phtf1Q9QZ09 761 aa10.64□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Phrf1A6H619 1682 aa10.64□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Gm6121L7MUF1 212 aa10.63□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Eftud2O08810 971 aaKnown RBP10.63□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Atp6v1aP50516 617 aaKnown RBP10.63□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Rasa3Q60790 834 aa10.63□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Tshz2Q68FE9 1030 aa10.63□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Zic5Q7TQ40 622 aa10.63□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 3830417A13RikQ8BQJ2 303 aa10.63□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Scfd2Q8BTY8 684 aa10.63□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Ctage5Q8R311 779 aa10.63□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Pcdha5Q91Y15 934 aa10.63□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Snx10Q9CWT3 201 aa10.63□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 RpainQ9CWY9 219 aa10.63□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Zfp831A2ADM8 1628 aa10.63□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Mms22lB1AUR6 1238 aa10.63□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Zc3h7bF8VPP8 982 aaKnown RBP10.63□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Epha3P29319 983 aa10.63□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Nlrp4cQ3TKR3 982 aa10.63□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 TraddQ3U0V2 310 aa10.63□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Xxylt1Q3U4G3 392 aa10.63□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Large2Q5XPT3 690 aa10.63□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Ptger2Q62053 362 aa10.63□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 TwistnbQ78WZ7 330 aaKnown RBP10.63□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 PicalmQ7M6Y3 660 aaKnown RBP10.63□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Ms4a5Q810P8 197 aa10.63□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 F11Q91Y47 624 aa10.63□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Edf1Q9JMG1 148 aaKnown RBP10.63□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Krt71Q9R0H5 524 aa10.63□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Gm2030D3Z7C4 212 aa10.63□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Calcoco1Q8CGU1 691 aa10.63□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Epn2Q8CHU3 595 aa10.63□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 OtoaQ8K561 1137 aa10.63□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Sumf1Q8R0F3 372 aa10.63□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Lrrc42Q8R2U7 421 aa10.63□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 4930449I24RikQ9D5E3 319 aa10.63□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Tlr2Q9QUN7 784 aa10.63□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Mtmr2Q9Z2D1 643 aa10.63□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Zfp646Q6NV66 1788 aa10.62□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Gm3095E9Q058 166 aa10.62□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Dnajb6O54946 365 aa10.62□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Sema3eP70275 775 aa10.62□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Tex11Q14AT2 947 aa10.62□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Pla2g4eQ50L42 875 aa10.62□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 ItgaeQ60677 1167 aa10.62□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Fbxo11Q7TPD1 930 aaKnown RBP10.62□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Psmd5Q8BJY1 504 aa10.62□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Trim47Q8C0E3 641 aa10.62□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Iws1Q8C1D8 766 aa10.62□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Ccdc113Q8C5T8 377 aa10.62□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Lrrc45Q8CIM1 670 aa10.62□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Dcaf8Q8N7N5 591 aa10.62□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Gys1Q9Z1E4 738 aaKnown RBP10.62□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Flt1P35969 1333 aa10.62□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Brwd3A2AHJ4 1799 aa10.62□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Kiaa1522A2A7S8 1013 aa10.62□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Slc35g2D3YVE8 412 aa10.62□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Gimap9G3X987 291 aa10.62□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Trappc3O55013 180 aa10.62□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Fam207aP58468 219 aaKnown RBP10.62□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Scarf1Q5ND28 820 aa10.62□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Rsad1Q5SUV1 442 aa10.62□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Nap1l4Q78ZA7 375 aaKnown RBP10.62□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Bank1Q80VH0 783 aa10.62□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 AarsQ8BGQ7 968 aa10.62□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Aldh5a1Q8BWF0 523 aa10.62□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Skor1Q8BX46 964 aa10.62□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Fthl17aQ9DAX0 182 aa10.62□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Prkab1Q9R078 270 aa10.62□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Gm14525B1AZA0 212 aa10.62□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Gm2012B1B0R1 212 aa10.62□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Cacna2d1O08532 1103 aa10.62□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Chmp6P0C0A3 200 aa10.62□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Nedd1P33215 660 aa10.62□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Gm14819Q62478 212 aa10.62□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Tmc3Q7TQ69 1130 aa10.62□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Pja2Q80U04 707 aa10.62□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Ints2Q80UK8 1198 aa10.62□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Btbd7Q8CFE5 1130 aa10.62□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Depdc1aQ8CIG0 804 aa10.62□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 CalcbQ99MP3 130 aa10.62□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Trappc11B2RXC1 1133 aa10.61□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Gm10110D3Z5M2 615 aa10.61□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Mmp15O54732 657 aa10.61□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Mybl2P48972 704 aa10.61□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Cul4aQ3TCH7 759 aa10.61□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Psmd1Q3TXS7 953 aa10.61□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Ttf2Q5NC05 1138 aa10.61□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Kiaa0319Q5SZV5 1081 aa10.61□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Rgl1Q60695 768 aa10.61□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Ehbp1Q69ZW3 1231 aa10.61□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 P2ry10Q8BFU7 328 aa10.61□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 DcakdQ8BHC4 231 aaKnown RBP10.61□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Afg3l2Q8JZQ2 802 aaKnown RBP10.61□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Dnm1lQ8K1M6 742 aa10.61□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Gimap4Q99JY3 219 aa10.61□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 15.8 ms