RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 C2cd5Q7TPS5 1016 aaKnown RBP11.06□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 BC048507Q80ZS7 89 aa11.06□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Sp8Q8BMJ8 486 aa11.06□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Sulf1Q8K007 870 aa11.06□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Tex19.1Q99MV2 351 aa11.06□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 MlxiplQ99MZ3 864 aa11.06□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Klc4Q9DBS5 619 aa11.06□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 1700016G14RikA0A286YCZ6 238 aa11.05□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Slc1a1P51906 523 aa11.05□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Chp1P61022 195 aa11.05□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Pstpip1P97814 415 aa11.05□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Plekha7Q3UIL6 1118 aaKnown RBP11.05□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Myo19Q5SV80 963 aa11.05□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Dpf2Q61103 391 aaKnown RBP11.05□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Mapk4Q6P5G0 583 aa11.05□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Gm2163Q6PCY5 473 aa11.05□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 GancQ8BVW0 898 aa11.05□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Pih1h3bQ8C6P5 218 aa11.05□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Acat1Q8QZT1 424 aa11.05□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 ArpinQ9D0A3 226 aa11.05□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Zcchc17Q9ESX4 241 aaKnown RBP11.05□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Ifi202Q9R002 445 aa11.05□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 NktrP30415 1453 aa11.05□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Fgd3O88842 733 aa11.05□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Gja8P28236 440 aa11.05□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Gm10392Q3V3I3 114 aa11.05□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Ece1Q4PZA2 769 aa11.05□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Stxbp2Q64324 593 aa11.05□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Apol9bQ8C7I4 310 aa11.05□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Epc1Q8C9X6 813 aa11.05□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Apol9aQ8VDU3 310 aa11.05□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Bzw1Q9CQC6 419 aaKnown RBP11.05□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Xab2Q9DCD2 855 aaKnown RBP11.05□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Zranb2Q9R020 330 aaKnown RBP11.05□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Slit2Q9R1B9 1521 aa11.05□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 MybP06876 636 aa11.05□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Luc7l3Q5SUF2 432 aaKnown RBP11.05□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 WhrnQ80VW5 918 aa11.05□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Aldh1b1Q9CZS1 519 aa11.05□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Tmem206Q9D771 350 aa11.05□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Dnajb7Q9QYI8 312 aa11.05□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Tmed2Q9R0Q3 201 aa11.05□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Psmd10Q9Z2X2 231 aa11.05□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Zfyve9A2A8R0 1397 aa11.05□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Tnip3A0A1D5RMN0 279 aa11.05□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Kpna2P52293 529 aaKnown RBP11.05□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Arl4aP61213 200 aa11.05□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Gdf10P97737 476 aa11.05□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 OtulinQ3UCV8 352 aa11.05□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Tmtc1Q3UV71 942 aa11.05□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Ttbk2Q3UVR3 1243 aa11.05□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Carmil2Q3V3V9 1296 aa11.05□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Scrn2Q8VCA8 425 aa11.05□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 PdiltQ9DAN1 588 aa11.05□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Kcng1A2BDX4 514 aa11.04□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Fam183bQ5NC57 135 aa11.04□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Mcf2lQ64096 1149 aa11.04□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Dync1li2Q6PDL0 492 aaKnown RBP11.04□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Dnajc5gQ8C632 165 aa11.04□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 C8aQ8K182 587 aa11.04□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Pdik1lQ8QZR7 341 aa11.04□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Slc35f6Q8VE96 372 aa11.04□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Anxa9Q9JHQ0 345 aa11.04□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Cbx8Q9QXV1 362 aa11.04□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Speer3W4VSP1 261 aa11.04□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Cav1P49817 178 aa11.04□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 PdxkQ8K183 312 aa11.04□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Olfr390Q8VEZ7 311 aa11.04□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Snx24Q9CRB0 169 aa11.04□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 RnmtQ9D0L8 465 aaKnown RBP11.04□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Gm45261A0A1B0GSP6 197 aa11.04□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Gm21962L7N280 338 aa11.04□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Plekhf1Q3TB82 279 aa11.04□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Mylk3Q3UIZ8 795 aa11.04□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Spata5Q3UMC0 893 aaKnown RBP11.04□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Snx19Q6P4T1 997 aa11.04□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Anapc5Q8BTZ4 740 aa11.04□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Cdk17Q8K0D0 523 aa11.04□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Spire2Q8K1S6 718 aa11.04□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Tor1aip1Q921T2 595 aaKnown RBP11.04□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Gm8994E9PV04 411 aaKnown RBP11.04□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Gm10436L7N1Y3 520 aa11.04□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Clcn6O35454 870 aa11.04□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Vsnl1P62761 191 aa11.04□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Taf1bP97358 586 aa11.04□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Ccdc160Q3UYG1 323 aa11.04□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Mtmr6Q8VE11 617 aa11.04□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Trex1Q91XB0 314 aa11.04□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 HgsQ99LI8 775 aa11.04□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Ranbp17Q99NF8 1088 aa11.04□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Klra17Q9JMA4 273 aa11.04□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 RpgrQ9R0X5 1001 aa11.04□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Adam22Q9R1V6 904 aa11.04□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Sall1Q9ER74 1322 aa11.03□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Stx2Q00262 289 aa11.03□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Cyp2e1Q05421 493 aa11.03□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Ptgs2Q05769 604 aa11.03□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Trim80Q3V061 624 aa11.03□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Pip5kl1Q6U7H8 395 aa11.03□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Calhm6Q8C9E8 313 aa11.03□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 48.4 ms