RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Cpsf2O35218 782 aaKnown RBP9.17□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Ncf2O70145 525 aa9.17□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Zmym1Q3TJB1 983 aa9.17□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Nr1d1Q3UV55 615 aa9.17□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Brip1Q5SXJ3 1174 aa9.17□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Ankrd24Q80VM7 985 aa9.17□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Epc1Q8C9X6 813 aa9.17□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Dr1Q91WV0 176 aa9.17□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Znfx1Q8R151 1909 aaKnown RBP9.17□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 D830030K20RikE9PYQ5 218 aa9.17□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Samd15F6XZJ7 620 aa9.17□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Gm3043K7N693 218 aa9.17□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Gm16440K7N6G6 218 aa9.17□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Gm2244L7N2A3 218 aa9.17□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Gm3278L7N2D2 218 aa9.17□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Gm8271L7N2E2 218 aa9.17□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Bace1P56818 501 aa9.17□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Trip13Q3UA06 432 aa9.17□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 EregQ61521 162 aa9.17□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Sema4bQ62179 823 aa9.17□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Spag7Q7TNE3 227 aaKnown RBP9.17□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 DnerQ8JZM4 737 aa9.17□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Prc1Q99K43 603 aaKnown RBP9.17□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 YwhabQ9CQV8 246 aaKnown RBP9.17□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Thap12Q9CUX1 758 aa9.17□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 CsadQ9DBE0 493 aa9.17□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Tjp3Q9QXY1 905 aa9.17□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Ripor3A1L3T7 938 aa9.17□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Meis3P97368 378 aa9.17□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Gm5168Q4KL04 211 aa9.17□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Specc1Q5SXY1 1067 aa9.17□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Asap3Q5U464 904 aa9.17□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Ces1eQ64176 562 aa9.17□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Tmem39bQ810L4 492 aa9.17□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Dusp19Q8K4T5 220 aa9.17□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Med24Q99K74 987 aa9.17□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Krtap5-3Q9D226 196 aa9.17□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Kcnh7Q9ER47 1195 aa9.17□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Fmnl1Q9JL26 1094 aa9.17□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 L1camP11627 1260 aa9.17□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 NsfP46460 744 aa9.17□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Klra9Q2TJJ8 266 aa9.17□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Gm10488Q4KL05 212 aa9.17□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Lrrc15Q80X72 579 aa9.17□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Ebag9Q9D0V7 213 aa9.17□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Mmrn2A6H6E2 943 aa9.17□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Lig1P37913 916 aa9.17□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 GmipQ6PGG2 971 aa9.17□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Bpifb6Q8BU51 449 aa9.17□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Tdrd3Q91W18 743 aaKnown RBP9.17□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Syngap1F6SEU4 1340 aa9.17□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Gm15448F6PZL4 682 aa9.16□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Tgfb2P27090 414 aa9.16□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Cst8P32766 142 aa9.16□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Serpina1eQ00898 413 aa9.16□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Ttc39dQ0VF76 604 aa9.16□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Gprc5cQ8K3J9 440 aa9.16□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Washc1Q8VDD8 475 aa9.16□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Slc25a38Q91XD8 326 aa9.16□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Bbs5Q9CZQ9 341 aa9.16□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Aldh1b1Q9CZS1 519 aa9.16□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 AatfQ9JKX4 526 aaKnown RBP9.16□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 RenbpP82343 430 aa9.16□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Oog4Q4G0C7 502 aa9.16□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Tmx4Q8C0L0 335 aa9.16□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Pnma1Q8C1C8 353 aa9.16□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Vcpip1Q8CDG3 1220 aa9.16□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 OscarQ8VBT3 265 aa9.16□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Reep2Q8VCD6 254 aa9.16□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Q9CYI0 393 aa9.16□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 MefvQ9JJ26 767 aa9.16□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Gm45208A0A140LJ36 292 aa9.16□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Gm45261A0A1B0GSP6 197 aa9.16□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Gm4841E9QAA8 417 aa9.16□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Got1P05201 413 aa9.16□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Mybpc2Q5XKE0 1136 aa9.16□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Git1Q68FF6 770 aa9.16□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Jade3Q6IE82 823 aa9.16□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Mettl25Q6NXH8 597 aa9.16□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Rassf3Q99P51 232 aa9.16□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Zranb2Q9R020 330 aaKnown RBP9.16□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Pitpnm2Q6ZPQ6 1335 aa9.16□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Zfp174B9EJW5 407 aa9.16□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 TbataQ7TSD4 393 aa9.16□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 AdalQ80SY6 360 aa9.16□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Ipo5Q8BKC5 1097 aaKnown RBP9.16□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Znf428Q8C1M2 176 aa9.16□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Klhl11Q8CE33 709 aa9.16□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Dqx1Q924H9 718 aa9.16□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Tlr3Q99MB1 905 aa9.16□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Ndufab1Q9CR21 156 aa9.16□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Zcchc8Q9CYA6 709 aaKnown RBP9.16□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 EcsitQ9QZH6 435 aa9.16□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Timm44O35857 452 aa9.16□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Mmp20P57748 482 aa9.16□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Fdxacb1Q3UY23 622 aa9.16□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Znf697Q569E7 569 aa9.16□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Rab34Q64008 259 aa9.16□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Actn1Q7TPR4 892 aaKnown RBP9.16□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 RalylQ8BTF8 293 aa9.16□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 21.5 ms