RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Senp1P59110 640 aa11.74□□□□□ -0.53
Msh3-201ENSMUST00000022220 Ubxn2bQ0KL01 331 aa11.74□□□□□ -0.53
Msh3-201ENSMUST00000022220 Mettl14Q3UIK4 456 aa11.74□□□□□ -0.53
Msh3-201ENSMUST00000022220 Gm10392Q3V3I3 114 aa11.74□□□□□ -0.53
Msh3-201ENSMUST00000022220 Atp13a3Q5XF89 1219 aa11.74□□□□□ -0.53
Msh3-201ENSMUST00000022220 Stambpl1Q76N33 436 aa11.74□□□□□ -0.53
Msh3-201ENSMUST00000022220 TbataQ7TSD4 393 aa11.74□□□□□ -0.53
Msh3-201ENSMUST00000022220 Mcur1Q9CXD6 340 aa11.74□□□□□ -0.53
Msh3-201ENSMUST00000022220 SmapQ9R0P4 181 aaKnown RBP11.74□□□□□ -0.53
Msh3-201ENSMUST00000022220 Scn4aQ9ER60 1841 aa11.74□□□□□ -0.53
Msh3-201ENSMUST00000022220 Cul4bA2A432 970 aaKnown RBP11.73□□□□□ -0.53
Msh3-201ENSMUST00000022220 Serpina16D3Z660 418 aa11.73□□□□□ -0.53
Msh3-201ENSMUST00000022220 Xrcc6P23475 608 aa11.73□□□□□ -0.53
Msh3-201ENSMUST00000022220 Cog5Q8C0L8 829 aa11.73□□□□□ -0.53
Msh3-201ENSMUST00000022220 Bnip3lQ9Z2F7 218 aa11.73□□□□□ -0.53
Msh3-201ENSMUST00000022220 Cst8P32766 142 aa11.73□□□□□ -0.53
Msh3-201ENSMUST00000022220 Sox10Q04888 466 aa11.73□□□□□ -0.53
Msh3-201ENSMUST00000022220 Trim21Q62191 470 aa11.73□□□□□ -0.53
Msh3-201ENSMUST00000022220 Sorbs1Q62417 1290 aa11.73□□□□□ -0.53
Msh3-201ENSMUST00000022220 Hdac10Q6P3E7 666 aa11.73□□□□□ -0.53
Msh3-201ENSMUST00000022220 Wdr60Q8C761 999 aa11.73□□□□□ -0.53
Msh3-201ENSMUST00000022220 Champ1Q8K327 802 aaKnown RBP11.73□□□□□ -0.53
Msh3-201ENSMUST00000022220 MyripQ8K3I4 856 aa11.73□□□□□ -0.53
Msh3-201ENSMUST00000022220 Eps8l1Q8R5F8 716 aa11.73□□□□□ -0.53
Msh3-201ENSMUST00000022220 Aipl1Q924K1 328 aa11.73□□□□□ -0.53
Msh3-201ENSMUST00000022220 Hsf2bpQ9D4G2 338 aa11.73□□□□□ -0.53
Msh3-201ENSMUST00000022220 Ttc38A3KMP2 465 aa11.73□□□□□ -0.53
Msh3-201ENSMUST00000022220 Vmn2r71L7N2D8 855 aa11.73□□□□□ -0.53
Msh3-201ENSMUST00000022220 Exoc4O35382 975 aa11.73□□□□□ -0.53
Msh3-201ENSMUST00000022220 MycP01108 439 aa11.73□□□□□ -0.53
Msh3-201ENSMUST00000022220 Tagap1P0CAX8 505 aa11.73□□□□□ -0.53
Msh3-201ENSMUST00000022220 Fgfr1opQ66JX5 399 aa11.73□□□□□ -0.53
Msh3-201ENSMUST00000022220 Sv2cQ69ZS6 727 aa11.73□□□□□ -0.53
Msh3-201ENSMUST00000022220 NfrkbQ6PIJ4 1296 aaKnown RBP11.73□□□□□ -0.53
Msh3-201ENSMUST00000022220 Zbed4Q80WQ9 1168 aa11.73□□□□□ -0.53
Msh3-201ENSMUST00000022220 4921504E06RikQ8CET2 560 aa11.73□□□□□ -0.53
Msh3-201ENSMUST00000022220 Olfr805Q8VFI4 319 aa11.73□□□□□ -0.53
Msh3-201ENSMUST00000022220 Cep19Q9CQA8 163 aa11.73□□□□□ -0.53
Msh3-201ENSMUST00000022220 Mtfr1lQ9CWE0 289 aa11.73□□□□□ -0.53
Msh3-201ENSMUST00000022220 RnmtQ9D0L8 465 aaKnown RBP11.73□□□□□ -0.53
Msh3-201ENSMUST00000022220 Trpc5Q9QX29 975 aa11.73□□□□□ -0.53
Msh3-201ENSMUST00000022220 Gm45261A0A1B0GSP6 197 aa11.72□□□□□ -0.53
Msh3-201ENSMUST00000022220 Herc3A6H6S0 1050 aa11.72□□□□□ -0.53
Msh3-201ENSMUST00000022220 Gm4307E9PZY4 289 aa11.72□□□□□ -0.53
Msh3-201ENSMUST00000022220 Gm3415J3QMS8 315 aa11.72□□□□□ -0.53
Msh3-201ENSMUST00000022220 Gm4312K9J7E2 289 aa11.72□□□□□ -0.53
Msh3-201ENSMUST00000022220 P01734 135 aa11.72□□□□□ -0.53
Msh3-201ENSMUST00000022220 Trim43aQ3TL54 445 aa11.72□□□□□ -0.53
Msh3-201ENSMUST00000022220 Gucy2fQ5SDA5 1108 aa11.72□□□□□ -0.53
Msh3-201ENSMUST00000022220 Nell2Q61220 819 aa11.72□□□□□ -0.53
Msh3-201ENSMUST00000022220 Actn1Q7TPR4 892 aaKnown RBP11.72□□□□□ -0.53
Msh3-201ENSMUST00000022220 Rbbp5Q8BX09 538 aaKnown RBP11.72□□□□□ -0.53
Msh3-201ENSMUST00000022220 PreplQ8C167 725 aa11.72□□□□□ -0.53
Msh3-201ENSMUST00000022220 Tor1aip1Q921T2 595 aaKnown RBP11.72□□□□□ -0.53
Msh3-201ENSMUST00000022220 Gm3404Q9D506 307 aa11.72□□□□□ -0.53
Msh3-201ENSMUST00000022220 Capn9Q9D805 690 aa11.72□□□□□ -0.53
Msh3-201ENSMUST00000022220 Scgb2b19J3QM75 112 aa11.72□□□□□ -0.53
Msh3-201ENSMUST00000022220 AoahO35298 574 aa11.72□□□□□ -0.53
Msh3-201ENSMUST00000022220 Got1P05201 413 aa11.72□□□□□ -0.53
Msh3-201ENSMUST00000022220 XlrP05531 208 aa11.72□□□□□ -0.53
Msh3-201ENSMUST00000022220 Pik3r1P26450 724 aa11.72□□□□□ -0.53
Msh3-201ENSMUST00000022220 Lilrb3P97484 841 aa11.72□□□□□ -0.53
Msh3-201ENSMUST00000022220 Ddx3xQ62167 662 aaKnown RBP11.72□□□□□ -0.53
Msh3-201ENSMUST00000022220 Best3Q6H1V1 669 aa11.72□□□□□ -0.53
Msh3-201ENSMUST00000022220 Arhgap18Q8K0Q5 663 aa11.72□□□□□ -0.53
Msh3-201ENSMUST00000022220 Alpk1Q9CXB8 1231 aa11.72□□□□□ -0.53
Msh3-201ENSMUST00000022220 Arl2bpQ9D385 163 aa11.72□□□□□ -0.53
Msh3-201ENSMUST00000022220 B3galt4Q9Z0F0 371 aa11.72□□□□□ -0.53
Msh3-201ENSMUST00000022220 Sall1Q9ER74 1322 aa11.72□□□□□ -0.53
Msh3-201ENSMUST00000022220 Akr1b10G5E895 316 aa11.72□□□□□ -0.53
Msh3-201ENSMUST00000022220 MagohP61327 146 aaKnown RBP11.72□□□□□ -0.53
Msh3-201ENSMUST00000022220 Tmed8Q3UHI4 326 aa11.72□□□□□ -0.53
Msh3-201ENSMUST00000022220 Klhdc9Q3USL1 350 aa11.72□□□□□ -0.53
Msh3-201ENSMUST00000022220 Krt31Q61765 416 aa11.72□□□□□ -0.53
Msh3-201ENSMUST00000022220 Fgd5Q80UZ0 1219 aa11.72□□□□□ -0.53
Msh3-201ENSMUST00000022220 Cnot10Q8BH15 744 aa11.72□□□□□ -0.53
Msh3-201ENSMUST00000022220 Mmgt1Q8K273 131 aaKnown RBP11.72□□□□□ -0.53
Msh3-201ENSMUST00000022220 MagohbQ9CQL1 146 aa11.72□□□□□ -0.53
Msh3-201ENSMUST00000022220 Pabpc6Q9D4E6 643 aaKnown RBP11.72□□□□□ -0.53
Msh3-201ENSMUST00000022220 Pdzd4Q9QY39 772 aa11.72□□□□□ -0.53
Msh3-201ENSMUST00000022220 Adgrb1Q3UHD1 1582 aa11.72□□□□□ -0.53
Msh3-201ENSMUST00000022220 Chrm1P12657 460 aa11.71□□□□□ -0.53
Msh3-201ENSMUST00000022220 Fgl2P12804 432 aa11.71□□□□□ -0.53
Msh3-201ENSMUST00000022220 Gna14P30677 355 aa11.71□□□□□ -0.53
Msh3-201ENSMUST00000022220 Ap1m1P35585 423 aa11.71□□□□□ -0.53
Msh3-201ENSMUST00000022220 Tll1Q62381 1013 aa11.71□□□□□ -0.53
Msh3-201ENSMUST00000022220 Krt12Q64291 487 aa11.71□□□□□ -0.53
Msh3-201ENSMUST00000022220 Dcaf15Q6PFH3 600 aa11.71□□□□□ -0.53
Msh3-201ENSMUST00000022220 Ccdc50Q810U5 305 aaKnown RBP11.71□□□□□ -0.53
Msh3-201ENSMUST00000022220 NenfQ9CQ45 171 aa11.71□□□□□ -0.53
Msh3-201ENSMUST00000022220 Ddx20Q9JJY4 825 aaKnown RBP11.71□□□□□ -0.53
Msh3-201ENSMUST00000022220 Xrcc5P27641 732 aa11.71□□□□□ -0.53
Msh3-201ENSMUST00000022220 Wnt10bP48614 389 aa11.71□□□□□ -0.53
Msh3-201ENSMUST00000022220 Cdc25aP48964 514 aa11.71□□□□□ -0.53
Msh3-201ENSMUST00000022220 Psmc6P62334 389 aa11.71□□□□□ -0.53
Msh3-201ENSMUST00000022220 Rps6P62754 249 aaKnown RBP11.71□□□□□ -0.53
Msh3-201ENSMUST00000022220 Atp8a1P70704 1164 aa11.71□□□□□ -0.53
Msh3-201ENSMUST00000022220 NfibP97863 570 aaKnown RBP11.71□□□□□ -0.53
Msh3-201ENSMUST00000022220 Gcnt1Q09324 428 aa11.71□□□□□ -0.53
Msh3-201ENSMUST00000022220 E2f8Q58FA4 860 aa11.71□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 14.4 ms