RNA–Protein interactions for RNA: YPR056W

TFB4, Transcript of Subunit of TFIIH complex, yeast

Gene TFB4, Length 1,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB4	YPR056W	YMR087W	Q04299	284 aa		5.62	□□□□□ -1.51
TFB4	YPR056W	AIM33	Q04516	312 aa		5.62	□□□□□ -1.51
TFB4	YPR056W	YDL144C	Q07589	356 aa		5.62	□□□□□ -1.51
TFB4	YPR056W	SOR2	Q07786	357 aa		5.62	□□□□□ -1.51
TFB4	YPR056W	IZH3	Q07959	543 aa		5.62	□□□□□ -1.51
TFB4	YPR056W	HTB1	P02293	131 aa	Known RBP	5.61	□□□□□ -1.51
TFB4	YPR056W	HTB2	P02294	131 aa		5.61	□□□□□ -1.51
TFB4	YPR056W	MAS2	P11914	482 aa		5.61	□□□□□ -1.51
TFB4	YPR056W	REV1	P12689	985 aa		5.61	□□□□□ -1.51
TFB4	YPR056W	YKL162C	P36052	402 aa		5.61	□□□□□ -1.51
TFB4	YPR056W	CHK1	P38147	527 aa		5.61	□□□□□ -1.51
TFB4	YPR056W	HIS2	P38635	335 aa		5.61	□□□□□ -1.51
TFB4	YPR056W	STP2	P38704	541 aa		5.61	□□□□□ -1.51
TFB4	YPR056W	PAC2	P39937	518 aa		5.61	□□□□□ -1.51
TFB4	YPR056W	YNL194C	P40169	301 aa		5.61	□□□□□ -1.51
TFB4	YPR056W	CWC23	P52868	283 aa	Predicted RBP	5.61	□□□□□ -1.51
TFB4	YPR056W	YGR168C	P53293	376 aa		5.61	□□□□□ -1.51
TFB4	YPR056W	SKI8	Q02793	397 aa	Predicted RBP	5.61	□□□□□ -1.51
TFB4	YPR056W	YMR178W	Q03219	274 aa	Known RBP	5.61	□□□□□ -1.51
TFB4	YPR056W	KRE28	Q04431	385 aa		5.61	□□□□□ -1.51
TFB4	YPR056W	YDL242W	Q07746	117 aa		5.61	□□□□□ -1.51
TFB4	YPR056W	YOR365C	Q08844	703 aa		5.61	□□□□□ -1.51
TFB4	YPR056W	USV1	Q12132	391 aa		5.61	□□□□□ -1.51
TFB4	YPR056W	SIA1	Q12212	622 aa		5.61	□□□□□ -1.51
TFB4	YPR056W	FRE7	Q12333	620 aa		5.61	□□□□□ -1.51
TFB4	YPR056W	FSH3	Q99369	266 aa		5.61	□□□□□ -1.51
TFB4	YPR056W	SEC3	P33332	1336 aa	Known RBP	5.6	□□□□□ -1.51
TFB4	YPR056W	MRP1	P10662	321 aa	Known RBP	5.6	□□□□□ -1.51
TFB4	YPR056W	WHI2	P12611	486 aa		5.6	□□□□□ -1.51
TFB4	YPR056W	ATP10	P18496	279 aa		5.6	□□□□□ -1.51
TFB4	YPR056W	CKI1	P20485	582 aa		5.6	□□□□□ -1.51
TFB4	YPR056W	AMD2	P22580	549 aa		5.6	□□□□□ -1.51
TFB4	YPR056W	RBK1	P25332	333 aa		5.6	□□□□□ -1.51
TFB4	YPR056W	FIG1	P38224	298 aa		5.6	□□□□□ -1.51
TFB4	YPR056W	AME1	P38313	324 aa		5.6	□□□□□ -1.51
TFB4	YPR056W	DBP8	P38719	431 aa		5.6	□□□□□ -1.51
TFB4	YPR056W	ERG26	P53199	349 aa	Known RBP	5.6	□□□□□ -1.51
TFB4	YPR056W	MPS1	P54199	764 aa		5.6	□□□□□ -1.51
TFB4	YPR056W	UBX2	Q04228	584 aa		5.6	□□□□□ -1.51
TFB4	YPR056W	PEX12	Q04370	399 aa		5.6	□□□□□ -1.51
TFB4	YPR056W	YPR022C	Q12139	1133 aa		5.6	□□□□□ -1.51
TFB4	YPR056W	YKL183C-A	Q3E765	70 aa		5.6	□□□□□ -1.51
TFB4	YPR056W	YBR121C-A	P0C5L4	52 aa		5.59	□□□□□ -1.51
TFB4	YPR056W	HPR1	P17629	752 aa	Known RBP	5.59	□□□□□ -1.51
TFB4	YPR056W	CYS4	P32582	507 aa	Known RBP	5.59	□□□□□ -1.51
TFB4	YPR056W	TAF14	P35189	244 aa		5.59	□□□□□ -1.51
TFB4	YPR056W	DTR1	P38125	572 aa		5.59	□□□□□ -1.51
TFB4	YPR056W	RPH1	P39956	796 aa		5.59	□□□□□ -1.51
TFB4	YPR056W	GIM4	P40005	111 aa	Known RBP	5.59	□□□□□ -1.51
TFB4	YPR056W	COA1	P40452	197 aa		5.59	□□□□□ -1.51
TFB4	YPR056W	TFG2	P41896	400 aa	Predicted RBP	5.59	□□□□□ -1.51
TFB4	YPR056W	PHO86	P46956	311 aa		5.59	□□□□□ -1.51
TFB4	YPR056W	YDL057W	Q07379	328 aa		5.59	□□□□□ -1.51
TFB4	YPR056W	RNH203	Q12338	110 aa		5.59	□□□□□ -1.51
TFB4	YPR056W	ECM5	Q03214	1411 aa		5.58	□□□□□ -1.52
TFB4	YPR056W	QCR7	P00128	127 aa		5.58	□□□□□ -1.52
TFB4	YPR056W	QCR2	P07257	368 aa		5.58	□□□□□ -1.52
TFB4	YPR056W	PEP4	P07267	405 aa	Known RBP	5.58	□□□□□ -1.52
TFB4	YPR056W	YPK1	P12688	680 aa	Known RBP	5.58	□□□□□ -1.52
TFB4	YPR056W	POX1	P13711	748 aa		5.58	□□□□□ -1.52
TFB4	YPR056W	CNA1	P23287	553 aa		5.58	□□□□□ -1.52
TFB4	YPR056W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	5.58	□□□□□ -1.52	not detected
TFB4	YPR056W	ELF1	P36053	145 aa		5.58	□□□□□ -1.52
TFB4	YPR056W	PHM8	P40025	321 aa		5.58	□□□□□ -1.52
TFB4	YPR056W	THO1	P40040	218 aa	Known RBP	5.58	□□□□□ -1.52
TFB4	YPR056W	YMR134W	P40207	237 aa		5.58	□□□□□ -1.52
TFB4	YPR056W	BTT1	P40314	149 aa	Predicted RBP	5.58	□□□□□ -1.52
TFB4	YPR056W	ICE2	P40499	491 aa		5.58	□□□□□ -1.52
TFB4	YPR056W	COX16	P47081	118 aa		5.58	□□□□□ -1.52
TFB4	YPR056W	YGR151C	P53287	111 aa		5.58	□□□□□ -1.52
TFB4	YPR056W	ZRG17	P53735	605 aa		5.58	□□□□□ -1.52
TFB4	YPR056W	ALG11	P53954	548 aa	Known RBP	5.58	□□□□□ -1.52
TFB4	YPR056W	CTF19	Q02732	369 aa		5.58	□□□□□ -1.52
TFB4	YPR056W	RIM13	Q03792	727 aa		5.58	□□□□□ -1.52
TFB4	YPR056W	SMP3	Q04174	516 aa		5.58	□□□□□ -1.52
TFB4	YPR056W	EMI2	Q04409	500 aa	Known RBP	5.58	□□□□□ -1.52
TFB4	YPR056W	YML053C	Q04978	212 aa		5.58	□□□□□ -1.52
TFB4	YPR056W	YDL114W	Q07530	308 aa		5.58	□□□□□ -1.52
TFB4	YPR056W	THP1	Q08231	455 aa		5.58	□□□□□ -1.52
TFB4	YPR056W	SAM4	Q08985	325 aa	Known RBP	5.58	□□□□□ -1.52
TFB4	YPR056W	YCL012C	Q8J0M4	134 aa		5.58	□□□□□ -1.52
TFB4	YPR056W	OPI3	P05375	206 aa		5.57	□□□□□ -1.52
TFB4	YPR056W	CLN3	P13365	580 aa		5.57	□□□□□ -1.52
TFB4	YPR056W	YMR31	P19955	123 aa		5.57	□□□□□ -1.52
TFB4	YPR056W	RPO26	P20435	155 aa		5.57	□□□□□ -1.52
TFB4	YPR056W	GIT1	P25346	518 aa		5.57	□□□□□ -1.52
TFB4	YPR056W	POP5	P28005	173 aa		5.57	□□□□□ -1.52
TFB4	YPR056W	ZUO1	P32527	433 aa	Known RBP	5.57	□□□□□ -1.52
TFB4	YPR056W	PDR3	P33200	976 aa		5.57	□□□□□ -1.52
TFB4	YPR056W	NUF2	P33895	451 aa		5.57	□□□□□ -1.52
TFB4	YPR056W	SHP1	P34223	423 aa		5.57	□□□□□ -1.52
TFB4	YPR056W	CCT2	P39076	527 aa	Known RBP	5.57	□□□□□ -1.52
TFB4	YPR056W	YER121W	P40076	114 aa		5.57	□□□□□ -1.52
TFB4	YPR056W	SOK1	P40317	901 aa		5.57	□□□□□ -1.52
TFB4	YPR056W	YPS6	P40583	537 aa		5.57	□□□□□ -1.52
TFB4	YPR056W	SNM1	P40993	198 aa		5.57	□□□□□ -1.52
TFB4	YPR056W	RPC17	P47076	161 aa		5.57	□□□□□ -1.52
TFB4	YPR056W	BIO4	P53630	237 aa		5.57	□□□□□ -1.52
TFB4	YPR056W	YIP3	P53633	176 aa		5.57	□□□□□ -1.52
TFB4	YPR056W	RSM23	Q01163	450 aa		5.57	□□□□□ -1.52

Retrieved 100 of 5,963 RNA–protein pairs in 60 ms