RNA–Protein interactions for RNA: YPL056C

LCL1, Transcript of Putative protein of unknown function, yeast

Gene LCL1, Length 306 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LCL1	YPL056C	EST1	P17214	699 aa	Predicted RBP	2.52	□□□□□ -2.01
LCL1	YPL056C	PRP2	P20095	876 aa	Predicted RBP	2.52	□□□□□ -2.01
LCL1	YPL056C	IDP1	P21954	428 aa	Known RBP	2.52	□□□□□ -2.01
LCL1	YPL056C	MNE1	P24720	663 aa		2.52	□□□□□ -2.01
LCL1	YPL056C	GRR1	P24814	1151 aa		2.52	□□□□□ -2.01
LCL1	YPL056C	ERG6	P25087	383 aa	Known RBP	2.52	□□□□□ -2.01
LCL1	YPL056C	RRP7	P25368	297 aa	Predicted RBP	2.52	□□□□□ -2.01
LCL1	YPL056C	YCL002C	P25565	263 aa		2.52	□□□□□ -2.01
LCL1	YPL056C	AHC2	P25649	128 aa		2.52	□□□□□ -2.01
LCL1	YPL056C	PPZ1	P26570	692 aa		2.52	□□□□□ -2.01
LCL1	YPL056C	YUR1	P26725	428 aa		2.52	□□□□□ -2.01
LCL1	YPL056C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	2.52	□□□□□ -2.01	not detected
LCL1	YPL056C	PEX4	P29340	183 aa		2.52	□□□□□ -2.01
LCL1	YPL056C	LIP5	P32875	414 aa		2.52	□□□□□ -2.01
LCL1	YPL056C	YPT7	P32939	208 aa		2.52	□□□□□ -2.01
LCL1	YPL056C	IXR1	P33417	597 aa		2.52	□□□□□ -2.01
LCL1	YPL056C	SRY1	P36007	326 aa		2.52	□□□□□ -2.01
LCL1	YPL056C	YKL162C	P36052	402 aa		2.52	□□□□□ -2.01
LCL1	YPL056C	PET10	P36139	283 aa		2.52	□□□□□ -2.01
LCL1	YPL056C	TAT1	P38085	619 aa		2.52	□□□□□ -2.01
LCL1	YPL056C	RRN10	P38204	145 aa		2.52	□□□□□ -2.01
LCL1	YPL056C	EXO5	P38289	585 aa		2.52	□□□□□ -2.01
LCL1	YPL056C	BIT2	P38346	545 aa		2.52	□□□□□ -2.01
LCL1	YPL056C	PHO89	P38361	574 aa		2.52	□□□□□ -2.01
LCL1	YPL056C	FSH1	P38777	243 aa	Known RBP	2.52	□□□□□ -2.01
LCL1	YPL056C	YHR054C	P38780	354 aa		2.52	□□□□□ -2.01
LCL1	YPL056C	SUR2	P38992	349 aa		2.52	□□□□□ -2.01
LCL1	YPL056C	PAC1	P39946	494 aa	Known RBP	2.52	□□□□□ -2.01
LCL1	YPL056C	PEP8	P40335	379 aa		2.52	□□□□□ -2.01
LCL1	YPL056C	GLR1	P41921	483 aa	Known RBP	2.52	□□□□□ -2.01
LCL1	YPL056C	RGD2	P43556	714 aa		2.52	□□□□□ -2.01
LCL1	YPL056C	GAT1	P43574	510 aa		2.52	□□□□□ -2.01
LCL1	YPL056C	PHO86	P46956	311 aa		2.52	□□□□□ -2.01
LCL1	YPL056C	SSY5	P47002	699 aa		2.52	□□□□□ -2.01
LCL1	YPL056C	PTK2	P47116	818 aa	Known RBP	2.52	□□□□□ -2.01
LCL1	YPL056C	YJR111C	P47148	283 aa	Known RBP	2.52	□□□□□ -2.01
LCL1	YPL056C	YJR154W	P47181	346 aa		2.52	□□□□□ -2.01
LCL1	YPL056C	ASK10	P48361	1146 aa		2.52	□□□□□ -2.01
LCL1	YPL056C	AMA1	P50082	593 aa		2.52	□□□□□ -2.01
LCL1	YPL056C	ACS2	P52910	683 aa	Known RBP	2.52	□□□□□ -2.01
LCL1	YPL056C	RTA1	P53047	317 aa		2.52	□□□□□ -2.01
LCL1	YPL056C	YGL204C	P53089	101 aa		2.52	□□□□□ -2.01
LCL1	YPL056C	NSA1	P53136	463 aa	Predicted RBP	2.52	□□□□□ -2.01
LCL1	YPL056C	PKP2	P53170	491 aa		2.52	□□□□□ -2.01
LCL1	YPL056C	SCW11	P53189	542 aa		2.52	□□□□□ -2.01
LCL1	YPL056C	YGR017W	P53210	297 aa		2.52	□□□□□ -2.01
LCL1	YPL056C	YGR127W	P53275	312 aa		2.52	□□□□□ -2.01
LCL1	YPL056C	GND2	P53319	492 aa		2.52	□□□□□ -2.01
LCL1	YPL056C	MKC7	P53379	596 aa		2.52	□□□□□ -2.01
LCL1	YPL056C	RRN9	P53437	365 aa		2.52	□□□□□ -2.01
LCL1	YPL056C	CUS2	P53830	285 aa	Predicted RBP	2.52	□□□□□ -2.01
LCL1	YPL056C	IDP3	P53982	420 aa	Known RBP	2.52	□□□□□ -2.01
LCL1	YPL056C	GPD1	Q00055	391 aa	Known RBP	2.52	□□□□□ -2.01
LCL1	YPL056C	REG1	Q00816	1014 aa		2.52	□□□□□ -2.01
LCL1	YPL056C	NUP49	Q02199	472 aa		2.52	□□□□□ -2.01
LCL1	YPL056C	YPL014W	Q02606	381 aa		2.52	□□□□□ -2.01
LCL1	YPL056C	NUP116	Q02630	1113 aa		2.52	□□□□□ -2.01
LCL1	YPL056C	MSC1	Q03104	513 aa		2.52	□□□□□ -2.01
LCL1	YPL056C	MAK3	Q03503	176 aa		2.52	□□□□□ -2.01
LCL1	YPL056C	TRS130	Q03660	1102 aa		2.52	□□□□□ -2.01
LCL1	YPL056C	SEN15	Q04675	128 aa		2.52	□□□□□ -2.01
LCL1	YPL056C	FRQ1	Q06389	190 aa		2.52	□□□□□ -2.01
LCL1	YPL056C	YPR127W	Q06494	345 aa		2.52	□□□□□ -2.01
LCL1	YPL056C	HDA2	Q06629	674 aa		2.52	□□□□□ -2.01
LCL1	YPL056C	SYT1	Q06836	1226 aa		2.52	□□□□□ -2.01
LCL1	YPL056C	CSM4	Q08955	156 aa		2.52	□□□□□ -2.01
LCL1	YPL056C	YLR046C	Q12253	270 aa		2.52	□□□□□ -2.01
LCL1	YPL056C	YLR126C	Q12288	251 aa		2.52	□□□□□ -2.01
LCL1	YPL056C	PST2	Q12335	198 aa	Known RBP	2.52	□□□□□ -2.01
LCL1	YPL056C	ERG27	Q12452	347 aa	Known RBP	2.52	□□□□□ -2.01
LCL1	YPL056C	EFG1	Q3E705	233 aa	Known RBP	2.52	□□□□□ -2.01
LCL1	YPL056C	YOL159C-A	Q3E769	90 aa		2.52	□□□□□ -2.01
LCL1	YPL056C	YPR014C	Q6B0W2	109 aa		2.52	□□□□□ -2.01
LCL1	YPL056C	Q0142	Q9ZZW4	58 aa		2.52	□□□□□ -2.01
LCL1	YPL056C	RPL9A	P05738	191 aa	Known RBP	2.51	□□□□□ -2.01
LCL1	YPL056C	CDC7	P06243	507 aa		2.51	□□□□□ -2.01
LCL1	YPL056C	SPS2	P08459	502 aa		2.51	□□□□□ -2.01
LCL1	YPL056C	PRB1	P09232	635 aa		2.51	□□□□□ -2.01
LCL1	YPL056C	ERR1	P0CX10	437 aa		2.51	□□□□□ -2.01
LCL1	YPL056C	ERR2	P0CX11	437 aa		2.51	□□□□□ -2.01
LCL1	YPL056C	SPO7	P18410	259 aa		2.51	□□□□□ -2.01
LCL1	YPL056C	CDC42	P19073	191 aa		2.51	□□□□□ -2.01
LCL1	YPL056C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	2.51	□□□□□ -2.01	not detected
LCL1	YPL056C	HOP1	P20050	605 aa		2.51	□□□□□ -2.01
LCL1	YPL056C	RNA14	P25298	677 aa	Known RBP	2.51	□□□□□ -2.01
LCL1	YPL056C	AGP1	P25376	633 aa		2.51	□□□□□ -2.01
LCL1	YPL056C	DCC1	P25559	380 aa		2.51	□□□□□ -2.01
LCL1	YPL056C	TAH1	P25638	111 aa	Predicted RBP	2.51	□□□□□ -2.01
LCL1	YPL056C	COQ3	P27680	312 aa		2.51	□□□□□ -2.01
LCL1	YPL056C	ERG9	P29704	444 aa		2.51	□□□□□ -2.01
LCL1	YPL056C	SNC1	P31109	117 aa		2.51	□□□□□ -2.01
LCL1	YPL056C	HMX1	P32339	317 aa		2.51	□□□□□ -2.01
LCL1	YPL056C	GCD11	P32481	527 aa	Known RBP	2.51	□□□□□ -2.01
LCL1	YPL056C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	2.51	□□□□□ -2.01	not detected
LCL1	YPL056C	EMP24	P32803	203 aa	Known RBP	2.51	□□□□□ -2.01
LCL1	YPL056C	MRPL6	P32904	214 aa		2.51	□□□□□ -2.01
LCL1	YPL056C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	2.51	□□□□□ -2.01	not detected
LCL1	YPL056C	TSA1	P34760	196 aa	Known RBP	2.51	□□□□□ -2.01
LCL1	YPL056C	IRS4	P36115	615 aa	Known RBP	2.51	□□□□□ -2.01
LCL1	YPL056C	TVP38	P36164	337 aa		2.51	□□□□□ -2.01

Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms