RNA–Protein interactions for RNA: YPL030W

TRM44, Transcript of tRNA(Ser) Um(44) 2'-O-methyltransferase, yeast

Gene TRM44, Length 1,704 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM44	YPL030W	APM1	Q00776	475 aa	Predicted RBP	4.24	□□□□□ -1.73
TRM44	YPL030W	YPL014W	Q02606	381 aa		4.24	□□□□□ -1.73
TRM44	YPL030W	SHR3	Q02774	210 aa		4.24	□□□□□ -1.73
TRM44	YPL030W	NAN1	Q02931	896 aa	Known RBP	4.24	□□□□□ -1.73
TRM44	YPL030W	YMR155W	Q03795	547 aa		4.24	□□□□□ -1.73
TRM44	YPL030W	RSF1	Q05043	376 aa		4.24	□□□□□ -1.73
TRM44	YPL030W	RTT109	Q07794	436 aa		4.24	□□□□□ -1.73
TRM44	YPL030W	YLR036C	Q07986	203 aa		4.24	□□□□□ -1.73
TRM44	YPL030W	MCH5	Q08777	521 aa		4.24	□□□□□ -1.73
TRM44	YPL030W	FDH1	Q08911	376 aa		4.24	□□□□□ -1.73
TRM44	YPL030W	MET32	Q12041	191 aa		4.24	□□□□□ -1.73
TRM44	YPL030W	YPL066W	Q12194	479 aa		4.24	□□□□□ -1.73
TRM44	YPL030W	YOR022C	Q12204	715 aa		4.24	□□□□□ -1.73
TRM44	YPL030W	SVS1	Q12254	260 aa		4.24	□□□□□ -1.73
TRM44	YPL030W	YDL085C-A	Q3E7B7	68 aa	Known RBP	4.24	□□□□□ -1.73
TRM44	YPL030W	TPK2	P06245	380 aa		4.24	□□□□□ -1.73
TRM44	YPL030W	CBS2	P14905	389 aa		4.24	□□□□□ -1.73
TRM44	YPL030W	PHO81	P17442	1178 aa		4.24	□□□□□ -1.73
TRM44	YPL030W	KIN82	P25341	720 aa		4.24	□□□□□ -1.73
TRM44	YPL030W	RAD14	P28519	371 aa		4.24	□□□□□ -1.73
TRM44	YPL030W	ARO7	P32178	256 aa		4.24	□□□□□ -1.73
TRM44	YPL030W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
TRM44	YPL030W	YNK1	P36010	153 aa	Known RBP	4.24	□□□□□ -1.73
TRM44	YPL030W	MCH2	P36032	473 aa		4.24	□□□□□ -1.73
TRM44	YPL030W	COS9	P36034	407 aa		4.24	□□□□□ -1.73
TRM44	YPL030W	NSG1	P38837	291 aa		4.24	□□□□□ -1.73
TRM44	YPL030W	FAA2	P39518	744 aa		4.24	□□□□□ -1.73
TRM44	YPL030W	BDH1	P39714	382 aa		4.24	□□□□□ -1.73
TRM44	YPL030W	LCP5	P40079	357 aa	Predicted RBP	4.24	□□□□□ -1.73
TRM44	YPL030W	RFC2	P40348	353 aa		4.24	□□□□□ -1.73
TRM44	YPL030W	QDR1	P40475	563 aa		4.24	□□□□□ -1.73
TRM44	YPL030W	TIR3	P40552	269 aa		4.24	□□□□□ -1.73
TRM44	YPL030W	PRM10	P42946	383 aa		4.24	□□□□□ -1.73
TRM44	YPL030W	MRX5	P47007	382 aa		4.24	□□□□□ -1.73
TRM44	YPL030W	YJL132W	P47014	750 aa		4.24	□□□□□ -1.73
TRM44	YPL030W	YJR011C	P47086	261 aa	Predicted RBP	4.24	□□□□□ -1.73
TRM44	YPL030W	CPR7	P47103	393 aa		4.24	□□□□□ -1.73
TRM44	YPL030W	CWC23	P52868	283 aa	Predicted RBP	4.24	□□□□□ -1.73
TRM44	YPL030W	SBH2	P52871	88 aa		4.24	□□□□□ -1.73
TRM44	YPL030W	NBP35	P52920	328 aa		4.24	□□□□□ -1.73
TRM44	YPL030W	AIF1	P52923	378 aa		4.24	□□□□□ -1.73
TRM44	YPL030W	MRPL22	P53881	309 aa		4.24	□□□□□ -1.73
TRM44	YPL030W	SLM2	P53955	656 aa		4.24	□□□□□ -1.73
TRM44	YPL030W	YNL034W	P53963	612 aa		4.24	□□□□□ -1.73
TRM44	YPL030W	YNL018C	P53976	612 aa		4.24	□□□□□ -1.73
TRM44	YPL030W	TRM44	Q02648	567 aa	Known RBP	4.24	□□□□□ -1.73
TRM44	YPL030W	PKR1	Q03880	122 aa	Known RBP	4.24	□□□□□ -1.73
TRM44	YPL030W	CAC2	Q04199	468 aa		4.24	□□□□□ -1.73
TRM44	YPL030W	YLR297W	Q05899	129 aa		4.24	□□□□□ -1.73
TRM44	YPL030W	TMA10	Q06177	86 aa		4.24	□□□□□ -1.73
TRM44	YPL030W	YLR456W	Q06199	204 aa		4.24	□□□□□ -1.73
TRM44	YPL030W	CTS2	Q06350	511 aa		4.24	□□□□□ -1.73
TRM44	YPL030W	PML1	Q07930	204 aa	Predicted RBP	4.24	□□□□□ -1.73
TRM44	YPL030W	PKH2	Q12236	1081 aa	Known RBP	4.24	□□□□□ -1.73
TRM44	YPL030W	SRF1	Q12516	437 aa		4.24	□□□□□ -1.73
TRM44	YPL030W	YIR021W-A	Q3E739	70 aa		4.24	□□□□□ -1.73
TRM44	YPL030W	SLO1	Q3E784	85 aa		4.24	□□□□□ -1.73
TRM44	YPL030W	MEX67	Q99257	599 aa	Known RBP	4.24	□□□□□ -1.73
TRM44	YPL030W	FSH3	Q99369	266 aa		4.24	□□□□□ -1.73
TRM44	YPL030W	QCR7	P00128	127 aa		4.23	□□□□□ -1.73
TRM44	YPL030W	ATP2	P00830	511 aa	Known RBP	4.23	□□□□□ -1.73
TRM44	YPL030W	CYT1	P07143	309 aa		4.23	□□□□□ -1.73
TRM44	YPL030W	SEC53	P07283	254 aa	Known RBP	4.23	□□□□□ -1.73
TRM44	YPL030W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.23	□□□□□ -1.73	not detected
TRM44	YPL030W	ATP5	P09457	212 aa		4.23	□□□□□ -1.73
TRM44	YPL030W	SEC12	P11655	471 aa		4.23	□□□□□ -1.73
TRM44	YPL030W	SPO7	P18410	259 aa		4.23	□□□□□ -1.73
TRM44	YPL030W	SCL1	P21243	252 aa	Known RBP	4.23	□□□□□ -1.73
TRM44	YPL030W	RPS1B	P23248	255 aa	Known RBP	4.23	□□□□□ -1.73
TRM44	YPL030W	BUD5	P25300	642 aa	Predicted RBP	4.23	□□□□□ -1.73
TRM44	YPL030W	IMG2	P25642	146 aa	Predicted RBP	4.23	□□□□□ -1.73
TRM44	YPL030W	IDH2	P28241	369 aa	Known RBP	4.23	□□□□□ -1.73
TRM44	YPL030W	RML2	P32611	393 aa		4.23	□□□□□ -1.73
TRM44	YPL030W	NGR1	P32831	672 aa	Known RBP	4.23	□□□□□ -1.73
TRM44	YPL030W	SER1	P33330	395 aa	Known RBP	4.23	□□□□□ -1.73
TRM44	YPL030W	SSS1	P35179	80 aa		4.23	□□□□□ -1.73
TRM44	YPL030W	YHL041W	P38730	149 aa		4.23	□□□□□ -1.73
TRM44	YPL030W	RPF1	P38805	295 aa	Known RBP	4.23	□□□□□ -1.73
TRM44	YPL030W	SFB3	P38810	929 aa		4.23	□□□□□ -1.73
TRM44	YPL030W	CHL4	P38907	458 aa		4.23	□□□□□ -1.73
TRM44	YPL030W	FAD1	P38913	306 aa		4.23	□□□□□ -1.73
TRM44	YPL030W	PRP39	P39682	629 aa	Known RBP	4.23	□□□□□ -1.73
TRM44	YPL030W	AFG3	P39925	761 aa		4.23	□□□□□ -1.73
TRM44	YPL030W	ICP55	P40051	511 aa		4.23	□□□□□ -1.73
TRM44	YPL030W	VFA1	P40080	203 aa		4.23	□□□□□ -1.73
TRM44	YPL030W	LSM5	P40089	93 aa	Known RBP	4.23	□□□□□ -1.73
TRM44	YPL030W	GSM1	P42950	618 aa		4.23	□□□□□ -1.73
TRM44	YPL030W	ALK1	P43633	760 aa	Known RBP	4.23	□□□□□ -1.73
TRM44	YPL030W	AIM23	P47015	356 aa		4.23	□□□□□ -1.73
TRM44	YPL030W	SNN1	P48232	102 aa		4.23	□□□□□ -1.73
TRM44	YPL030W	ALT2	P52892	507 aa		4.23	□□□□□ -1.73
TRM44	YPL030W	OAZ1	Q02803	292 aa		4.23	□□□□□ -1.73
TRM44	YPL030W	TPP1	Q03796	238 aa		4.23	□□□□□ -1.73
TRM44	YPL030W	ARA2	Q04212	335 aa		4.23	□□□□□ -1.73
TRM44	YPL030W	SDH7	Q04401	133 aa		4.23	□□□□□ -1.73
TRM44	YPL030W	YDR222W	Q04925	415 aa		4.23	□□□□□ -1.73
TRM44	YPL030W	TDA5	Q06417	326 aa	Known RBP	4.23	□□□□□ -1.73
TRM44	YPL030W	BER1	Q06688	274 aa	Known RBP	4.23	□□□□□ -1.73
TRM44	YPL030W	CYK3	Q07533	885 aa		4.23	□□□□□ -1.73
TRM44	YPL030W	AIM6	Q07716	390 aa		4.23	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms