RNA–Protein interactions for RNA: YOR171C

LCB4, Transcript of Sphingoid long-chain base kinase, yeastyeast

Gene LCB4, Length 1,875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB4YOR171C LAC1P28496 418 aa3.03□□□□□ -1.93
LCB4YOR171C RIM1P32445 135 aaKnown RBP3.03□□□□□ -1.93
LCB4YOR171C COS9P36034 407 aa3.03□□□□□ -1.93
LCB4YOR171C HOT13P36078 116 aa3.03□□□□□ -1.93
LCB4YOR171C DUG2P38149 878 aa3.03□□□□□ -1.93
LCB4YOR171C MIC12P38341 106 aa3.03□□□□□ -1.93
LCB4YOR171C BIG1P38813 335 aa3.03□□□□□ -1.93
LCB4YOR171C SBE22P38814 852 aa3.03□□□□□ -1.93
LCB4YOR171C YHR210CP38893 341 aa3.03□□□□□ -1.93
LCB4YOR171C YJR149WP47177 404 aa3.03□□□□□ -1.93
LCB4YOR171C ASN2P49090 572 aaKnown RBP3.03□□□□□ -1.93
LCB4YOR171C NSA1P53136 463 aaPredicted RBP3.03□□□□□ -1.93
LCB4YOR171C PKP2P53170 491 aa3.03□□□□□ -1.93
LCB4YOR171C MRPL50P53724 139 aa3.03□□□□□ -1.93
LCB4YOR171C UBX2Q04228 584 aa3.03□□□□□ -1.93
LCB4YOR171C NSE1Q07913 336 aa3.03□□□□□ -1.93
LCB4YOR171C YOL019WQ08157 551 aa3.03□□□□□ -1.93
LCB4YOR171C AAD15Q08361 143 aa3.03□□□□□ -1.93
LCB4YOR171C CSM4Q08955 156 aa3.03□□□□□ -1.93
LCB4YOR171C RRD2Q12461 358 aa3.03□□□□□ -1.93
LCB4YOR171C YCL012CQ8J0M4 134 aa3.03□□□□□ -1.93
LCB4YOR171C YBR085C-AO43137 85 aa3.02□□□□□ -1.93
LCB4YOR171C SSC1P0CS90 654 aaKnown RBP3.02□□□□□ -1.93
LCB4YOR171C PCT1P13259 424 aa3.02□□□□□ -1.93
LCB4YOR171C CHA1P25379 360 aaKnown RBP3.02□□□□□ -1.93
LCB4YOR171C TCA17P32613 152 aa3.02□□□□□ -1.93
LCB4YOR171C RAD24P32641 659 aa3.02□□□□□ -1.93
LCB4YOR171C TAF14P35189 244 aa3.02□□□□□ -1.93
LCB4YOR171C MMS21P38632 267 aa3.02□□□□□ -1.93
LCB4YOR171C ERG28P40030 148 aa3.02□□□□□ -1.93
LCB4YOR171C VRG4P40107 337 aa3.02□□□□□ -1.93
LCB4YOR171C SEC24P40482 926 aaKnown RBP3.02□□□□□ -1.93
LCB4YOR171C STE24P47154 453 aa3.02□□□□□ -1.93
LCB4YOR171C MSY1P48527 492 aa3.02□□□□□ -1.93
LCB4YOR171C YPT11P48559 417 aa3.02□□□□□ -1.93
LCB4YOR171C TAF6P53040 516 aa3.02□□□□□ -1.93
LCB4YOR171C STR3P53101 465 aaKnown RBP3.02□□□□□ -1.93
LCB4YOR171C TAF12Q03761 539 aa3.02□□□□□ -1.93
LCB4YOR171C DXO1Q06349 442 aa3.02□□□□□ -1.93
LCB4YOR171C ATG9Q12142 997 aa3.02□□□□□ -1.93
LCB4YOR171C PKH2Q12236 1081 aaKnown RBP3.02□□□□□ -1.93
LCB4YOR171C RDL1Q12305 139 aaKnown RBP3.02□□□□□ -1.93
LCB4YOR171C SET6Q12529 373 aa3.02□□□□□ -1.93
LCB4YOR171C UBA3Q99344 299 aa3.02□□□□□ -1.93
LCB4YOR171C QCR7P00128 127 aa3.01□□□□□ -1.93
LCB4YOR171C HTB1P02293 131 aaKnown RBP3.01□□□□□ -1.93
LCB4YOR171C HTB2P02294 131 aa3.01□□□□□ -1.93
LCB4YOR171C MAS1P10507 462 aa3.01□□□□□ -1.93
LCB4YOR171C ERG11P10614 530 aa3.01□□□□□ -1.93
LCB4YOR171C PTC6P25646 442 aa3.01□□□□□ -1.93
LCB4YOR171C CSM1P25651 190 aa3.01□□□□□ -1.93
LCB4YOR171C MSS51P32335 436 aa3.01□□□□□ -1.93
LCB4YOR171C PDB1P32473 366 aaKnown RBP3.01□□□□□ -1.93
LCB4YOR171C GSH1P32477 678 aa3.01□□□□□ -1.93
LCB4YOR171C PRP21P32524 280 aaPredicted RBP3.01□□□□□ -1.93
LCB4YOR171C PEX2P32800 271 aa3.01□□□□□ -1.93
LCB4YOR171C PRS4P38063 326 aaPredicted RBP3.01□□□□□ -1.93
LCB4YOR171C YPK3P38070 525 aa3.01□□□□□ -1.93
LCB4YOR171C CYC2P38909 366 aa3.01□□□□□ -1.93
LCB4YOR171C SEO1P39709 593 aa3.01□□□□□ -1.93
LCB4YOR171C MMF1P40185 145 aaKnown RBP3.01□□□□□ -1.93
LCB4YOR171C IRC8P47046 822 aa3.01□□□□□ -1.93
LCB4YOR171C CWC23P52868 283 aaPredicted RBP3.01□□□□□ -1.93
LCB4YOR171C GET1P53192 235 aa3.01□□□□□ -1.93
LCB4YOR171C YAT1P80235 687 aa3.01□□□□□ -1.93
LCB4YOR171C AAT1Q01802 451 aa3.01□□□□□ -1.93
LCB4YOR171C SHR3Q02774 210 aa3.01□□□□□ -1.93
LCB4YOR171C IZH1Q03419 316 aa3.01□□□□□ -1.93
LCB4YOR171C DYN3Q04949 312 aa3.01□□□□□ -1.93
LCB4YOR171C SHS1Q07657 551 aa3.01□□□□□ -1.93
LCB4YOR171C DAS2Q12084 232 aa3.01□□□□□ -1.93
LCB4YOR171C PRP46Q12417 451 aaPredicted RBP3.01□□□□□ -1.93
LCB4YOR171C ARP6Q12509 438 aa3.01□□□□□ -1.93
LCB4YOR171C YLR111WQ12528 110 aa3.01□□□□□ -1.93
LCB4YOR171C PET20Q99373 253 aa3.01□□□□□ -1.93
LCB4YOR171C TAD3Q9URQ3 322 aa3.01□□□□□ -1.93
LCB4YOR171C PGK1P00560 416 aaKnown RBP3.01□□□□□ -1.93
LCB4YOR171C RPL18AP0CX49 186 aaKnown RBP3.01□□□□□ -1.93
LCB4YOR171C RPL18BP0CX50 186 aaKnown RBP3.01□□□□□ -1.93
LCB4YOR171C MAK32P23060 363 aa3.01□□□□□ -1.93
LCB4YOR171C MBR1P23493 339 aa3.01□□□□□ -1.93
LCB4YOR171C VMA16P23968 213 aa3.01□□□□□ -1.93
LCB4YOR171C RRT12P25381 491 aa3.01□□□□□ -1.93
LCB4YOR171C YIM1P28625 365 aa3.01□□□□□ -1.93
LCB4YOR171C ERG9P29704 444 aa3.01□□□□□ -1.93
LCB4YOR171C DEG1P31115 442 aaKnown RBP3.01□□□□□ -1.93
LCB4YOR171C MNN2P38069 597 aa3.01□□□□□ -1.93
LCB4YOR171C ECM8P38246 354 aa3.01□□□□□ -1.93
LCB4YOR171C SSN2P38931 1420 aa3.01□□□□□ -1.93
LCB4YOR171C SRP14P38985 146 aa3.01□□□□□ -1.93
LCB4YOR171C CCT4P39078 528 aaKnown RBP3.01□□□□□ -1.93
LCB4YOR171C SEN34P39707 275 aa3.01□□□□□ -1.93
LCB4YOR171C MRX5P47007 382 aa3.01□□□□□ -1.93
LCB4YOR171C UBX6P47049 396 aa3.01□□□□□ -1.93
LCB4YOR171C YJR111CP47148 283 aaKnown RBP3.01□□□□□ -1.93
LCB4YOR171C ROG1P53118 685 aa3.01□□□□□ -1.93
LCB4YOR171C NQM1P53228 333 aaPredicted RBP3.01□□□□□ -1.93
LCB4YOR171C YNL140CP53910 189 aa3.01□□□□□ -1.93
LCB4YOR171C OCA2P53949 197 aa3.01□□□□□ -1.93
LCB4YOR171C MPS1P54199 764 aa3.01□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms