RNA–Protein interactions for RNA: YOR124C

UBP2, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP2, Length 3,819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP2YOR124C VMA5P31412 392 aaKnown RBP1.97□□□□□ -2.09
UBP2YOR124C ARO7P32178 256 aa1.97□□□□□ -2.09
UBP2YOR124C PDC2P32896 925 aa1.97□□□□□ -2.09
UBP2YOR124C ECT1P33412 323 aa1.97□□□□□ -2.09
UBP2YOR124C SDH4P37298 181 aa1.97□□□□□ -2.09
UBP2YOR124C YPT31P38555 223 aaKnown RBP1.97□□□□□ -2.09
UBP2YOR124C RGA1P39083 1007 aa1.97□□□□□ -2.09
UBP2YOR124C FMP52P40008 231 aa1.97□□□□□ -2.09
UBP2YOR124C FIR1P40020 876 aa1.97□□□□□ -2.09
UBP2YOR124C YIL166CP40445 542 aa1.97□□□□□ -2.09
UBP2YOR124C YFL040WP43562 540 aa1.97□□□□□ -2.09
UBP2YOR124C GNA1P43577 159 aaPredicted RBP1.97□□□□□ -2.09
UBP2YOR124C TIM54P47045 478 aa1.97□□□□□ -2.09
UBP2YOR124C BUD9P53226 547 aa1.97□□□□□ -2.09
UBP2YOR124C SHY1P53266 389 aa1.97□□□□□ -2.09
UBP2YOR124C EGD1Q02642 157 aaKnown RBP1.97□□□□□ -2.09
UBP2YOR124C EAR1Q03212 550 aa1.97□□□□□ -2.09
UBP2YOR124C YMR087WQ04299 284 aa1.97□□□□□ -2.09
UBP2YOR124C YLR173WQ06247 608 aa1.97□□□□□ -2.09
UBP2YOR124C PLB3Q08108 686 aa1.97□□□□□ -2.09
UBP2YOR124C PGC1Q08959 321 aa1.97□□□□□ -2.09
UBP2YOR124C MAS2P11914 482 aa1.97□□□□□ -2.09
UBP2YOR124C CYS3P31373 394 aaKnown RBP1.97□□□□□ -2.09
UBP2YOR124C SEA4P38164 1038 aa1.97□□□□□ -2.09
UBP2YOR124C YBL029WP38201 376 aa1.97□□□□□ -2.09
UBP2YOR124C CDS1P38221 457 aa1.97□□□□□ -2.09
UBP2YOR124C HSE1P38753 452 aa1.97□□□□□ -2.09
UBP2YOR124C AXL2P38928 823 aa1.97□□□□□ -2.09
UBP2YOR124C YEL025CP39991 1188 aa1.97□□□□□ -2.09
UBP2YOR124C LSM4P40070 187 aaKnown RBP1.97□□□□□ -2.09
UBP2YOR124C YIR035CP40579 254 aa1.97□□□□□ -2.09
UBP2YOR124C ATG36P46983 293 aa1.97□□□□□ -2.09
UBP2YOR124C DAN1P47178 298 aa1.97□□□□□ -2.09
UBP2YOR124C RRT6P53117 311 aaPredicted RBP1.97□□□□□ -2.09
UBP2YOR124C IRC15Q02733 499 aa1.97□□□□□ -2.09
UBP2YOR124C FDC1Q03034 503 aa1.97□□□□□ -2.09
UBP2YOR124C NGL2Q03264 515 aaKnown RBP1.97□□□□□ -2.09
UBP2YOR124C TRS31Q03337 283 aa1.97□□□□□ -2.09
UBP2YOR124C YMD8Q03697 442 aa1.97□□□□□ -2.09
UBP2YOR124C YDR387CQ04162 555 aa1.97□□□□□ -2.09
UBP2YOR124C ERP1Q05359 219 aaKnown RBP1.97□□□□□ -2.09
UBP2YOR124C RCL1Q08096 367 aaPredicted RBP1.97□□□□□ -2.09
UBP2YOR124C MSC6Q08818 692 aaKnown RBP1.97□□□□□ -2.09
UBP2YOR124C CTF3Q12748 733 aa1.97□□□□□ -2.09
UBP2YOR124C YPR145C-AQ2V2P0 78 aa1.97□□□□□ -2.09
UBP2YOR124C YLR149CQ99296 730 aa1.97□□□□□ -2.09
UBP2YOR124C ISN1Q99312 450 aa1.97□□□□□ -2.09
UBP2YOR124C FLP1P03870 423 aa1.96□□□□□ -2.1
UBP2YOR124C TY1A-LR4P0C2I8 440 aaKnown RBP1.96□□□□□ -2.1
UBP2YOR124C TY1A-DR6P0CX70 440 aa1.96□□□□□ -2.1
UBP2YOR124C TY1A-ER1P0CX71 440 aa1.96□□□□□ -2.1
UBP2YOR124C TY1A-LR2P0CX72 440 aa1.96□□□□□ -2.1
UBP2YOR124C TY1A-PLP0CX73 440 aa1.96□□□□□ -2.1
UBP2YOR124C TY1A-JR1P0CX74 440 aa1.96□□□□□ -2.1
UBP2YOR124C TY1A-LR3P0CX75 440 aa1.96□□□□□ -2.1
UBP2YOR124C TY1A-ML2P0CX76 440 aa1.96□□□□□ -2.1
UBP2YOR124C YFL068WP0CX99 160 aa1.96□□□□□ -2.1
UBP2YOR124C YLL066W-AP0CY00 160 aa1.96□□□□□ -2.1
UBP2YOR124C YLL067W-AP0CY01 160 aa1.96□□□□□ -2.1
UBP2YOR124C SCL1P21243 252 aaKnown RBP1.96□□□□□ -2.1
UBP2YOR124C VPS34P22543 875 aa1.96□□□□□ -2.1
UBP2YOR124C YCR099CP25657 155 aa1.96□□□□□ -2.1
UBP2YOR124C SRB6P32570 121 aa1.96□□□□□ -2.1
UBP2YOR124C SIP1P32578 815 aa1.96□□□□□ -2.1
UBP2YOR124C AIM26P32858 118 aa1.96□□□□□ -2.1
UBP2YOR124C THI80P35202 319 aa1.96□□□□□ -2.1
UBP2YOR124C GND1P38720 489 aaKnown RBP1.96□□□□□ -2.1
UBP2YOR124C SSO2P39926 295 aa1.96□□□□□ -2.1
UBP2YOR124C SPC25P40014 221 aa1.96□□□□□ -2.1
UBP2YOR124C COG3P40094 801 aa1.96□□□□□ -2.1
UBP2YOR124C RRG9P40156 214 aa1.96□□□□□ -2.1
UBP2YOR124C ACS2P52910 683 aaKnown RBP1.96□□□□□ -2.1
UBP2YOR124C YGR053CP53234 283 aa1.96□□□□□ -2.1
UBP2YOR124C NRD1P53617 575 aaKnown RBP RIP-Chip data1.96□□□□□ -2.1not detected
UBP2YOR124C MTQ1P53944 314 aa1.96□□□□□ -2.1
UBP2YOR124C TPS1Q00764 495 aaKnown RBP1.96□□□□□ -2.1
UBP2YOR124C APM1Q00776 475 aaPredicted RBP1.96□□□□□ -2.1
UBP2YOR124C MRPS17Q03246 237 aaPredicted RBP1.96□□□□□ -2.1
UBP2YOR124C ASM4Q05166 528 aa1.96□□□□□ -2.1
UBP2YOR124C PIN3Q06449 215 aa1.96□□□□□ -2.1
UBP2YOR124C MMT2Q08970 484 aa1.96□□□□□ -2.1
UBP2YOR124C ATG41Q12048 136 aa1.96□□□□□ -2.1
UBP2YOR124C TY1A-GR1Q12085 440 aa1.96□□□□□ -2.1
UBP2YOR124C YLR126CQ12288 251 aa1.96□□□□□ -2.1
UBP2YOR124C TY1A-PR3Q6Q5H1 440 aaKnown RBP1.96□□□□□ -2.1
UBP2YOR124C TY1A-OLQ92392 440 aaKnown RBP1.96□□□□□ -2.1
UBP2YOR124C SIR2P06700 562 aa1.96□□□□□ -2.1
UBP2YOR124C PHO4P07270 312 aaKnown RBP1.96□□□□□ -2.1
UBP2YOR124C CHO1P08456 276 aa1.96□□□□□ -2.1
UBP2YOR124C ASP3-2P0CX77 362 aa1.96□□□□□ -2.1
UBP2YOR124C ASP3-3P0CX78 362 aa1.96□□□□□ -2.1
UBP2YOR124C ASP3-4P0CX79 362 aa1.96□□□□□ -2.1
UBP2YOR124C ASP3-1P0CZ17 362 aa1.96□□□□□ -2.1
UBP2YOR124C ERD2P18414 219 aa1.96□□□□□ -2.1
UBP2YOR124C SAM2P19358 384 aaKnown RBP1.96□□□□□ -2.1
UBP2YOR124C MRPL44P19956 98 aa1.96□□□□□ -2.1
UBP2YOR124C HOP1P20050 605 aa1.96□□□□□ -2.1
UBP2YOR124C IDP1P21954 428 aaKnown RBP1.96□□□□□ -2.1
UBP2YOR124C APN1P22936 367 aa1.96□□□□□ -2.1
UBP2YOR124C RPL24BP24000 155 aaKnown RBP1.96□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms