RNA–Protein interactions for RNA: YNL242W

ATG2, Transcript of Peripheral membrane protein required for autophagic vesicle formation, yeast

Gene ATG2, Length 4,779 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG2	YNL242W	COX5A	P00424	153 aa		3.81	□□□□□ -1.8
ATG2	YNL242W	CPA1	P07258	411 aa	Known RBP	3.81	□□□□□ -1.8
ATG2	YNL242W	MOD5	P07884	428 aa		3.81	□□□□□ -1.8
ATG2	YNL242W	SPS4	P09937	338 aa		3.81	□□□□□ -1.8
ATG2	YNL242W	OLE1	P21147	510 aa	Known RBP	3.81	□□□□□ -1.8
ATG2	YNL242W	LDS1	P31379	325 aa		3.81	□□□□□ -1.8
ATG2	YNL242W	YBR063C	P38083	404 aa		3.81	□□□□□ -1.8
ATG2	YNL242W	YMC2	P38087	329 aa		3.81	□□□□□ -1.8
ATG2	YNL242W	AIM3	P38266	947 aa	Known RBP	3.81	□□□□□ -1.8
ATG2	YNL242W	YMR144W	P40214	342 aa	Known RBP	3.81	□□□□□ -1.8
ATG2	YNL242W	MEP1	P40260	492 aa		3.81	□□□□□ -1.8
ATG2	YNL242W	ARH1	P48360	493 aa		3.81	□□□□□ -1.8
ATG2	YNL242W	GPI8	P49018	411 aa		3.81	□□□□□ -1.8
ATG2	YNL242W	PMT5	P52867	743 aa		3.81	□□□□□ -1.8
ATG2	YNL242W	IMO32	P53219	342 aa		3.81	□□□□□ -1.8
ATG2	YNL242W	BOP2	Q06150	570 aa		3.81	□□□□□ -1.8
ATG2	YNL242W	RCL1	Q08096	367 aa	Predicted RBP	3.81	□□□□□ -1.8
ATG2	YNL242W	JLP1	Q12358	412 aa		3.81	□□□□□ -1.8
ATG2	YNL242W	REP2	P03872	296 aa		3.81	□□□□□ -1.8
ATG2	YNL242W	FUM1	P08417	488 aa	Known RBP	3.81	□□□□□ -1.8
ATG2	YNL242W	SAT4	P25333	603 aa	Known RBP	3.81	□□□□□ -1.8
ATG2	YNL242W	RSC6	P25632	483 aa		3.81	□□□□□ -1.8
ATG2	YNL242W	DPH2	P32461	534 aa		3.81	□□□□□ -1.8
ATG2	YNL242W	SSS1	P35179	80 aa		3.81	□□□□□ -1.8
ATG2	YNL242W	EDS1	P38073	919 aa		3.81	□□□□□ -1.8
ATG2	YNL242W	SLM1	P40485	686 aa		3.81	□□□□□ -1.8
ATG2	YNL242W	ULI1	P43604	169 aa		3.81	□□□□□ -1.8
ATG2	YNL242W	SCW11	P53189	542 aa		3.81	□□□□□ -1.8
ATG2	YNL242W	POP6	P53218	158 aa		3.81	□□□□□ -1.8
ATG2	YNL242W	CDC14	Q00684	551 aa		3.81	□□□□□ -1.8
ATG2	YNL242W	MRPS17	Q03246	237 aa	Predicted RBP	3.81	□□□□□ -1.8
ATG2	YNL242W	LRS4	Q04087	347 aa	Known RBP	3.81	□□□□□ -1.8
ATG2	YNL242W	BUR2	Q05949	395 aa		3.81	□□□□□ -1.8
ATG2	YNL242W	HBT1	Q07653	1046 aa	Known RBP	3.81	□□□□□ -1.8
ATG2	YNL242W	MRH1	Q12117	320 aa	Predicted RBP	3.81	□□□□□ -1.8
ATG2	YNL242W	UPC2	Q12151	913 aa		3.81	□□□□□ -1.8
ATG2	YNL242W	YDR524C-B	Q3E6R4	66 aa		3.81	□□□□□ -1.8
ATG2	YNL242W	STE12	P13574	688 aa		3.8	□□□□□ -1.8
ATG2	YNL242W	AAT2	P23542	418 aa	Known RBP	3.8	□□□□□ -1.8
ATG2	YNL242W	MRP20	P32387	263 aa		3.8	□□□□□ -1.8
ATG2	YNL242W	ISC10	P32645	267 aa		3.8	□□□□□ -1.8
ATG2	YNL242W	TSA1	P34760	196 aa	Known RBP	3.8	□□□□□ -1.8
ATG2	YNL242W	MRPL37	P36532	105 aa		3.8	□□□□□ -1.8
ATG2	YNL242W	RCK1	P38622	512 aa		3.8	□□□□□ -1.8
ATG2	YNL242W	SFB3	P38810	929 aa		3.8	□□□□□ -1.8
ATG2	YNL242W	NSG1	P38837	291 aa		3.8	□□□□□ -1.8
ATG2	YNL242W	SEN34	P39707	275 aa		3.8	□□□□□ -1.8
ATG2	YNL242W	RRG9	P40156	214 aa		3.8	□□□□□ -1.8
ATG2	YNL242W	RPL10	P41805	221 aa	Known RBP	3.8	□□□□□ -1.8
ATG2	YNL242W	GNA1	P43577	159 aa	Predicted RBP	3.8	□□□□□ -1.8
ATG2	YNL242W	UBC12	P52491	188 aa		3.8	□□□□□ -1.8
ATG2	YNL242W	MNT4	P53745	580 aa		3.8	□□□□□ -1.8
ATG2	YNL242W	ATG21	Q02887	496 aa		3.8	□□□□□ -1.8
ATG2	YNL242W	TDA1	Q03533	586 aa		3.8	□□□□□ -1.8
ATG2	YNL242W	LEA1	Q08963	238 aa	Predicted RBP	3.8	□□□□□ -1.8
ATG2	YNL242W	SIA1	Q12212	622 aa		3.8	□□□□□ -1.8
ATG2	YNL242W	GLO4	Q12320	285 aa		3.8	□□□□□ -1.8
ATG2	YNL242W	YOR012W	Q12351	137 aa		3.8	□□□□□ -1.8
ATG2	YNL242W	EAF3	Q12432	401 aa		3.8	□□□□□ -1.8
ATG2	YNL242W	AHA1	Q12449	350 aa	Known RBP	3.8	□□□□□ -1.8
ATG2	YNL242W	HXK2	P04807	486 aa	Known RBP	3.8	□□□□□ -1.8
ATG2	YNL242W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	3.8	□□□□□ -1.8	not detected
ATG2	YNL242W	MSF1	P08425	469 aa		3.8	□□□□□ -1.8
ATG2	YNL242W	DAL81	P21657	970 aa		3.8	□□□□□ -1.8
ATG2	YNL242W	SED4	P25365	1065 aa		3.8	□□□□□ -1.8
ATG2	YNL242W	TMA19	P35691	167 aa	Known RBP	3.8	□□□□□ -1.8
ATG2	YNL242W	RPF2	P36160	344 aa	Known RBP	3.8	□□□□□ -1.8
ATG2	YNL242W	ERV46	P39727	415 aa		3.8	□□□□□ -1.8
ATG2	YNL242W	PAN6	P40459	309 aa		3.8	□□□□□ -1.8
ATG2	YNL242W	AGE2	P40529	298 aa		3.8	□□□□□ -1.8
ATG2	YNL242W	YIR007W	P40566	764 aa		3.8	□□□□□ -1.8
ATG2	YNL242W	SSU1	P41930	458 aa		3.8	□□□□□ -1.8
ATG2	YNL242W	COX16	P47081	118 aa		3.8	□□□□□ -1.8
ATG2	YNL242W	YDR109C	Q04585	715 aa		3.8	□□□□□ -1.8
ATG2	YNL242W	SSK1	Q07084	712 aa		3.8	□□□□□ -1.8
ATG2	YNL242W	MFG1	Q07684	458 aa		3.8	□□□□□ -1.8
ATG2	YNL242W	GPM2	Q12008	311 aa		3.8	□□□□□ -1.8
ATG2	YNL242W	YDL007C-A	Q2V2Q0	85 aa		3.8	□□□□□ -1.8
ATG2	YNL242W	YPL119C-A	Q3E751	87 aa		3.8	□□□□□ -1.8
ATG2	YNL242W	RPC40	P07703	335 aa	Known RBP	3.8	□□□□□ -1.8
ATG2	YNL242W	RPP1B	P10622	106 aa	Known RBP	3.8	□□□□□ -1.8
ATG2	YNL242W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	3.8	□□□□□ -1.8	not detected
ATG2	YNL242W	NTH1	P32356	751 aa		3.8	□□□□□ -1.8
ATG2	YNL242W	SEC17	P32602	292 aa		3.8	□□□□□ -1.8
ATG2	YNL242W	SKN1	P33336	771 aa		3.8	□□□□□ -1.8
ATG2	YNL242W	ELF1	P36053	145 aa		3.8	□□□□□ -1.8
ATG2	YNL242W	SPO73	P40031	143 aa		3.8	□□□□□ -1.8
ATG2	YNL242W	PAM16	P42949	149 aa		3.8	□□□□□ -1.8
ATG2	YNL242W	MPC1	P53157	130 aa	Known RBP	3.8	□□□□□ -1.8
ATG2	YNL242W	CCE1	Q03702	353 aa		3.8	□□□□□ -1.8
ATG2	YNL242W	EMI1	Q04406	187 aa		3.8	□□□□□ -1.8
ATG2	YNL242W	SEN15	Q04675	128 aa		3.8	□□□□□ -1.8
ATG2	YNL242W	GPB1	Q08886	897 aa		3.8	□□□□□ -1.8
ATG2	YNL242W	YFR010W-A	P0C5N0	62 aa		3.8	□□□□□ -1.8
ATG2	YNL242W	EHT1	P38295	451 aa		3.8	□□□□□ -1.8
ATG2	YNL242W	PHO90	P39535	881 aa		3.8	□□□□□ -1.8
ATG2	YNL242W	PRM9	P39551	298 aa		3.8	□□□□□ -1.8
ATG2	YNL242W	UTP7	P40055	554 aa	Known RBP	3.8	□□□□□ -1.8
ATG2	YNL242W	UTP25	P40498	721 aa	Known RBP	3.8	□□□□□ -1.8
ATG2	YNL242W	BAP3	P41815	604 aa		3.8	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 36.5 ms