RNA–Protein interactions for RNA: YNL232W

CSL4, Transcript of Exosome non-catalytic core component, yeast

Gene CSL4, Length 879 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSL4	YNL232W	NIT3	P49954	291 aa		5.22	□□□□□ -1.57
CSL4	YNL232W	YLR460C	P54007	376 aa		5.22	□□□□□ -1.57
CSL4	YNL232W	HPT1	Q04178	221 aa	Known RBP	5.22	□□□□□ -1.57
CSL4	YNL232W	HRI1	Q05905	244 aa	Known RBP	5.22	□□□□□ -1.57
CSL4	YNL232W	YOR365C	Q08844	703 aa		5.22	□□□□□ -1.57
CSL4	YNL232W	YPL191C	Q08930	360 aa		5.22	□□□□□ -1.57
CSL4	YNL232W	NMD4	Q12129	218 aa		5.22	□□□□□ -1.57
CSL4	YNL232W	DBP10	Q12389	995 aa	Known RBP	5.22	□□□□□ -1.57
CSL4	YNL232W	SFG1	Q12507	346 aa		5.22	□□□□□ -1.57
CSL4	YNL232W	MDM12	Q92328	271 aa		5.22	□□□□□ -1.57
CSL4	YNL232W	HEM2	P05373	342 aa		5.21	□□□□□ -1.58
CSL4	YNL232W	STE7	P06784	515 aa		5.21	□□□□□ -1.58
CSL4	YNL232W	AMD2	P22580	549 aa		5.21	□□□□□ -1.58
CSL4	YNL232W	IDH2	P28241	369 aa	Known RBP	5.21	□□□□□ -1.58
CSL4	YNL232W	HSP150	P32478	413 aa		5.21	□□□□□ -1.58
CSL4	YNL232W	MSN2	P33748	704 aa		5.21	□□□□□ -1.58
CSL4	YNL232W	ASK1	P35734	292 aa		5.21	□□□□□ -1.58
CSL4	YNL232W	TPO5	P36029	618 aa		5.21	□□□□□ -1.58
CSL4	YNL232W	FES1	P38260	290 aa		5.21	□□□□□ -1.58
CSL4	YNL232W	APD1	P38281	316 aa		5.21	□□□□□ -1.58
CSL4	YNL232W	YHL037C	P38733	133 aa		5.21	□□□□□ -1.58
CSL4	YNL232W	YIL067C	P40514	678 aa		5.21	□□□□□ -1.58
CSL4	YNL232W	APS3	P47064	194 aa		5.21	□□□□□ -1.58
CSL4	YNL232W	RPL22B	P56628	122 aa	Known RBP	5.21	□□□□□ -1.58
CSL4	YNL232W	RMI1	Q02685	241 aa		5.21	□□□□□ -1.58
CSL4	YNL232W	URH1	Q04179	340 aa		5.21	□□□□□ -1.58
CSL4	YNL232W	SWF1	Q04629	336 aa		5.21	□□□□□ -1.58
CSL4	YNL232W	COQ11	Q05892	277 aa		5.21	□□□□□ -1.58
CSL4	YNL232W	ARO10	Q06408	635 aa		5.21	□□□□□ -1.58
CSL4	YNL232W	YPR172W	Q06608	200 aa		5.21	□□□□□ -1.58
CSL4	YNL232W	VAC14	Q06708	880 aa		5.21	□□□□□ -1.58
CSL4	YNL232W	TMC1	Q08422	150 aa	Predicted RBP	5.21	□□□□□ -1.58
CSL4	YNL232W	RDR1	Q08904	546 aa		5.21	□□□□□ -1.58
CSL4	YNL232W	RRP36	Q12481	300 aa	Predicted RBP	5.21	□□□□□ -1.58
CSL4	YNL232W	FOL3	Q12676	427 aa	Predicted RBP	5.21	□□□□□ -1.58
CSL4	YNL232W	SPO16	P17122	198 aa		5.2	□□□□□ -1.58
CSL4	YNL232W	YKL187C	P34231	750 aa		5.2	□□□□□ -1.58
CSL4	YNL232W	MNN2	P38069	597 aa		5.2	□□□□□ -1.58
CSL4	YNL232W	DTR1	P38125	572 aa		5.2	□□□□□ -1.58
CSL4	YNL232W	HSM3	P38348	480 aa		5.2	□□□□□ -1.58
CSL4	YNL232W	TRR2	P38816	342 aa		5.2	□□□□□ -1.58
CSL4	YNL232W	FET3	P38993	636 aa		5.2	□□□□□ -1.58
CSL4	YNL232W	YIL166C	P40445	542 aa		5.2	□□□□□ -1.58
CSL4	YNL232W	GPP1	P41277	250 aa	Known RBP	5.2	□□□□□ -1.58
CSL4	YNL232W	ERP6	P53198	216 aa		5.2	□□□□□ -1.58
CSL4	YNL232W	TPC1	P53257	314 aa		5.2	□□□□□ -1.58
CSL4	YNL232W	TEX1	P53851	422 aa	Known RBP	5.2	□□□□□ -1.58
CSL4	YNL232W	SLT2	Q00772	484 aa		5.2	□□□□□ -1.58
CSL4	YNL232W	YMR027W	Q04371	470 aa		5.2	□□□□□ -1.58
CSL4	YNL232W	YPR091C	Q06833	770 aa		5.2	□□□□□ -1.58
CSL4	YNL232W	RRG7	Q08774	242 aa	Predicted RBP	5.2	□□□□□ -1.58
CSL4	YNL232W	CHS5	Q12114	671 aa	Known RBP	5.2	□□□□□ -1.58
CSL4	YNL232W	SKS1	Q12505	502 aa		5.2	□□□□□ -1.58
CSL4	YNL232W	YCL012C	Q8J0M4	134 aa		5.2	□□□□□ -1.58
CSL4	YNL232W	CBP6	P07253	162 aa	Predicted RBP	5.19	□□□□□ -1.58
CSL4	YNL232W	MET2	P08465	486 aa		5.19	□□□□□ -1.58
CSL4	YNL232W	RPB2	P08518	1224 aa	Known RBP	5.19	□□□□□ -1.58
CSL4	YNL232W	ARF1	P11076	181 aa	Known RBP	5.19	□□□□□ -1.58
CSL4	YNL232W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	5.19	□□□□□ -1.58	not detected
CSL4	YNL232W	ART10	P18634	518 aa	Known RBP	5.19	□□□□□ -1.58
CSL4	YNL232W	IME2	P32581	645 aa		5.19	□□□□□ -1.58
CSL4	YNL232W	VPS51	P36116	164 aa		5.19	□□□□□ -1.58
CSL4	YNL232W	SIC1	P38634	284 aa		5.19	□□□□□ -1.58
CSL4	YNL232W	ARN2	P38724	620 aa		5.19	□□□□□ -1.58
CSL4	YNL232W	CCT2	P39076	527 aa	Known RBP	5.19	□□□□□ -1.58
CSL4	YNL232W	KEL2	P50090	882 aa		5.19	□□□□□ -1.58
CSL4	YNL232W	YPT32	P51996	222 aa	Known RBP	5.19	□□□□□ -1.58
CSL4	YNL232W	UBC11	P52492	156 aa		5.19	□□□□□ -1.58
CSL4	YNL232W	EFM5	P53200	248 aa	Known RBP	5.19	□□□□□ -1.58
CSL4	YNL232W	YNL140C	P53910	189 aa		5.19	□□□□□ -1.58
CSL4	YNL232W	SDC1	Q03323	175 aa		5.19	□□□□□ -1.58
CSL4	YNL232W	API2	Q04413	109 aa		5.19	□□□□□ -1.58
CSL4	YNL232W	SMA2	Q04658	369 aa		5.19	□□□□□ -1.58
CSL4	YNL232W	DCR2	Q05924	578 aa		5.19	□□□□□ -1.58
CSL4	YNL232W	YET3	Q07451	203 aa		5.19	□□□□□ -1.58
CSL4	YNL232W	YTM1	Q12024	460 aa	Predicted RBP	5.19	□□□□□ -1.58
CSL4	YNL232W	YNL162W-A	Q3E7A8	72 aa		5.19	□□□□□ -1.58
CSL4	YNL232W	HEM4	P06174	275 aa		5.18	□□□□□ -1.58
CSL4	YNL232W	YHR214C-D	P0CX93	97 aa		5.18	□□□□□ -1.58
CSL4	YNL232W	HEM15	P16622	393 aa		5.18	□□□□□ -1.58
CSL4	YNL232W	CWH43	P25618	953 aa		5.18	□□□□□ -1.58
CSL4	YNL232W	YCR090C	P25654	182 aa	Known RBP	5.18	□□□□□ -1.58
CSL4	YNL232W	YEF1	P32622	495 aa		5.18	□□□□□ -1.58
CSL4	YNL232W	VPS21	P36017	210 aa	Known RBP	5.18	□□□□□ -1.58
CSL4	YNL232W	EXO84	P38261	753 aa		5.18	□□□□□ -1.58
CSL4	YNL232W	AST2	P39945	430 aa	Known RBP	5.18	□□□□□ -1.58
CSL4	YNL232W	YIL012W	P40551	113 aa		5.18	□□□□□ -1.58
CSL4	YNL232W	YFL051C	P43552	160 aa		5.18	□□□□□ -1.58
CSL4	YNL232W	YJR120W	P47157	116 aa		5.18	□□□□□ -1.58
CSL4	YNL232W	TOM22	P49334	152 aa		5.18	□□□□□ -1.58
CSL4	YNL232W	YGR066C	P53242	292 aa		5.18	□□□□□ -1.58
CSL4	YNL232W	RPM2	Q02773	1202 aa		5.18	□□□□□ -1.58
CSL4	YNL232W	YML131W	Q03102	365 aa		5.18	□□□□□ -1.58
CSL4	YNL232W	BUD22	Q04347	519 aa	Known RBP	5.18	□□□□□ -1.58
CSL4	YNL232W	PAL1	Q05518	499 aa	Known RBP	5.18	□□□□□ -1.58
CSL4	YNL232W	PML1	Q07930	204 aa	Predicted RBP	5.18	□□□□□ -1.58
CSL4	YNL232W	NTG2	Q08214	380 aa		5.18	□□□□□ -1.58
CSL4	YNL232W	GEP5	Q12393	293 aa		5.18	□□□□□ -1.58
CSL4	YNL232W	AHA1	Q12449	350 aa	Known RBP	5.18	□□□□□ -1.58
CSL4	YNL232W	YOL087C	Q99247	1116 aa		5.18	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 21.6 ms