RNA–Protein interactions for RNA: YNL197C

WHI3, Transcript of RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci, yeastyeast

Gene WHI3, Length 1,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
WHI3YNL197C YGL114WP53134 725 aa3.03□□□□□ -1.92
WHI3YNL197C TDA1Q03533 586 aa3.03□□□□□ -1.92
WHI3YNL197C TSR1Q07381 788 aaKnown RBP3.03□□□□□ -1.92
WHI3YNL197C AHC1Q12433 566 aa3.03□□□□□ -1.92
WHI3YNL197C MSS116P15424 664 aaKnown RBP3.03□□□□□ -1.92
WHI3YNL197C MRPL8P22353 238 aa3.03□□□□□ -1.92
WHI3YNL197C CHA1P25379 360 aaKnown RBP3.03□□□□□ -1.92
WHI3YNL197C DAL80P26343 269 aa3.03□□□□□ -1.92
WHI3YNL197C PEX32P38292 413 aa3.03□□□□□ -1.92
WHI3YNL197C COX14P39103 70 aa3.03□□□□□ -1.92
WHI3YNL197C SEC9P40357 651 aa3.03□□□□□ -1.92
WHI3YNL197C CTK3P46963 296 aaPredicted RBP3.03□□□□□ -1.92
WHI3YNL197C LCB3P47013 409 aa3.03□□□□□ -1.92
WHI3YNL197C YJR085CP47131 105 aaKnown RBP3.03□□□□□ -1.92
WHI3YNL197C BOR1P53838 576 aa3.03□□□□□ -1.92
WHI3YNL197C ECM18Q04623 453 aa3.03□□□□□ -1.92
WHI3YNL197C NAT4Q04751 285 aa3.03□□□□□ -1.92
WHI3YNL197C RAD1P06777 1100 aa3.02□□□□□ -1.93
WHI3YNL197C SNM1P40993 198 aa3.02□□□□□ -1.93
WHI3YNL197C WWM1P43582 211 aaKnown RBP3.02□□□□□ -1.93
WHI3YNL197C YFR018CP43599 363 aa3.02□□□□□ -1.93
WHI3YNL197C LST7P53237 242 aa3.02□□□□□ -1.93
WHI3YNL197C DBP6P53734 629 aaKnown RBP3.02□□□□□ -1.93
WHI3YNL197C NUP116Q02630 1113 aa3.02□□□□□ -1.93
WHI3YNL197C ELP3Q02908 557 aaKnown RBP3.02□□□□□ -1.93
WHI3YNL197C YLR297WQ05899 129 aa3.02□□□□□ -1.93
WHI3YNL197C YLH47Q06493 454 aa3.02□□□□□ -1.93
WHI3YNL197C CIN8P27895 1000 aa3.01□□□□□ -1.93
WHI3YNL197C IST2P38250 946 aa3.01□□□□□ -1.93
WHI3YNL197C SWC5P38326 303 aa3.01□□□□□ -1.93
WHI3YNL197C YHR218WP38899 603 aa3.01□□□□□ -1.93
WHI3YNL197C YAT2P40017 923 aa3.01□□□□□ -1.93
WHI3YNL197C REE1P40893 198 aa3.01□□□□□ -1.93
WHI3YNL197C CDC40P40968 455 aaPredicted RBP3.01□□□□□ -1.93
WHI3YNL197C SEC27P41811 889 aaKnown RBP3.01□□□□□ -1.93
WHI3YNL197C YCH1P42937 148 aa3.01□□□□□ -1.93
WHI3YNL197C YNL146WP53906 100 aa3.01□□□□□ -1.93
WHI3YNL197C ARP5P53946 755 aa3.01□□□□□ -1.93
WHI3YNL197C HER2Q03557 464 aa3.01□□□□□ -1.93
WHI3YNL197C CAB5Q03941 241 aa3.01□□□□□ -1.93
WHI3YNL197C MRPL35Q06678 367 aa3.01□□□□□ -1.93
WHI3YNL197C SHS1Q07657 551 aa3.01□□□□□ -1.93
WHI3YNL197C YOL075CQ08234 1294 aa3.01□□□□□ -1.93
WHI3YNL197C FDH1Q08911 376 aa3.01□□□□□ -1.93
WHI3YNL197C YLL053CP0CD98 152 aa3.01□□□□□ -1.93
WHI3YNL197C SSE1P32589 693 aaKnown RBP3.01□□□□□ -1.93
WHI3YNL197C BUD2P33314 1104 aa3.01□□□□□ -1.93
WHI3YNL197C RTT105P40063 208 aa3.01□□□□□ -1.93
WHI3YNL197C GCD14P46959 383 aaPredicted RBP3.01□□□□□ -1.93
WHI3YNL197C CWC25P53854 179 aaKnown RBP3.01□□□□□ -1.93
WHI3YNL197C PBA1Q05778 276 aa3.01□□□□□ -1.93
WHI3YNL197C TMS1Q12116 473 aa3.01□□□□□ -1.93
WHI3YNL197C GLE1Q12315 538 aa3.01□□□□□ -1.93
WHI3YNL197C PAA1Q12447 191 aaKnown RBP3.01□□□□□ -1.93
WHI3YNL197C YPS1P32329 569 aa3□□□□□ -1.93
WHI3YNL197C SDH3P33421 198 aa3□□□□□ -1.93
WHI3YNL197C PTI1P39927 425 aaPredicted RBP3□□□□□ -1.93
WHI3YNL197C KEG1P43614 200 aa3□□□□□ -1.93
WHI3YNL197C YGL260WP53056 76 aa3□□□□□ -1.93
WHI3YNL197C YMR102CQ03177 834 aa3□□□□□ -1.93
WHI3YNL197C CSM3Q04659 317 aa3□□□□□ -1.93
WHI3YNL197C VAC14Q06708 880 aa3□□□□□ -1.93
WHI3YNL197C LOT6Q07923 191 aa3□□□□□ -1.93
WHI3YNL197C YOR387CQ08910 206 aa3□□□□□ -1.93
WHI3YNL197C YGK3Q12222 375 aaPredicted RBP3□□□□□ -1.93
WHI3YNL197C FUN26P31381 517 aa3□□□□□ -1.93
WHI3YNL197C MNS1P32906 549 aa3□□□□□ -1.93
WHI3YNL197C RIB7P33312 244 aa3□□□□□ -1.93
WHI3YNL197C RTC2P38279 296 aa3□□□□□ -1.93
WHI3YNL197C BTT1P40314 149 aaPredicted RBP3□□□□□ -1.93
WHI3YNL197C YIL029CP40538 142 aa3□□□□□ -1.93
WHI3YNL197C TRF5P48561 642 aaKnown RBP3□□□□□ -1.93
WHI3YNL197C NAS6P50086 228 aa3□□□□□ -1.93
WHI3YNL197C RRN11Q04712 507 aa3□□□□□ -1.93
WHI3YNL197C TLG2Q08144 397 aa3□□□□□ -1.93
WHI3YNL197C APC5Q08683 685 aa3□□□□□ -1.93
WHI3YNL197C RPL18AP0CX49 186 aaKnown RBP2.99□□□□□ -1.93
WHI3YNL197C RPL18BP0CX50 186 aaKnown RBP2.99□□□□□ -1.93
WHI3YNL197C SPT15P13393 240 aaKnown RBP2.99□□□□□ -1.93
WHI3YNL197C ARF2P19146 181 aaKnown RBP2.99□□□□□ -1.93
WHI3YNL197C NAM9P27929 486 aa2.99□□□□□ -1.93
WHI3YNL197C MKK1P32490 508 aa2.99□□□□□ -1.93
WHI3YNL197C SPO23P33757 523 aa2.99□□□□□ -1.93
WHI3YNL197C CIN2P46670 268 aa2.99□□□□□ -1.93
WHI3YNL197C AIM24P47127 394 aa2.99□□□□□ -1.93
WHI3YNL197C BNS1P50084 137 aa2.99□□□□□ -1.93
WHI3YNL197C PNC1P53184 216 aaKnown RBP2.99□□□□□ -1.93
WHI3YNL197C TRM112P53738 135 aaPredicted RBP2.99□□□□□ -1.93
WHI3YNL197C NDE2Q07500 545 aa2.99□□□□□ -1.93
WHI3YNL197C YDL114WQ07530 308 aa2.99□□□□□ -1.93
WHI3YNL197C FCY22Q12119 530 aa2.99□□□□□ -1.93
WHI3YNL197C PIS1P06197 220 aaKnown RBP2.98□□□□□ -1.93
WHI3YNL197C OM45P16547 393 aa2.98□□□□□ -1.93
WHI3YNL197C POP5P28005 173 aa2.98□□□□□ -1.93
WHI3YNL197C CSE2P33308 149 aa2.98□□□□□ -1.93
WHI3YNL197C MYO3P36006 1272 aa2.98□□□□□ -1.93
WHI3YNL197C IML3P38265 245 aa2.98□□□□□ -1.93
WHI3YNL197C END3P39013 349 aa2.98□□□□□ -1.93
WHI3YNL197C PAN6P40459 309 aa2.98□□□□□ -1.93
WHI3YNL197C AIP1P46680 615 aaKnown RBP2.98□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 32.5 ms