RNA–Protein interactions for RNA: YMR309C

NIP1, Transcript of eIF3c subunit of the eukaryotic translation initiation factor 3 (eIF3), yeastyeast

Gene NIP1, Length 2,439 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP1YMR309C CAK1P43568 368 aaPredicted RBP0.37□□□□□ -2.35
NIP1YMR309C BIO3P50277 480 aa0.37□□□□□ -2.35
NIP1YMR309C HST4P53688 370 aa0.37□□□□□ -2.35
NIP1YMR309C MRX11Q03079 207 aa0.37□□□□□ -2.35
NIP1YMR309C YMR155WQ03795 547 aa0.37□□□□□ -2.35
NIP1YMR309C GAS2Q06135 555 aa0.37□□□□□ -2.35
NIP1YMR309C PIN3Q06449 215 aa0.37□□□□□ -2.35
NIP1YMR309C ASA1Q06822 443 aa0.37□□□□□ -2.35
NIP1YMR309C YDL121CQ07541 149 aa0.37□□□□□ -2.35
NIP1YMR309C OPI3P05375 206 aa0.37□□□□□ -2.35
NIP1YMR309C ARF1P11076 181 aaKnown RBP0.37□□□□□ -2.35
NIP1YMR309C FUS3P16892 353 aaKnown RBP0.37□□□□□ -2.35
NIP1YMR309C PPQ1P32945 549 aa0.37□□□□□ -2.35
NIP1YMR309C PTK1P36002 662 aaPredicted RBP0.37□□□□□ -2.35
NIP1YMR309C SMP1P38128 452 aa0.37□□□□□ -2.35
NIP1YMR309C SLM4P38247 162 aa0.37□□□□□ -2.35
NIP1YMR309C YPS6P40583 537 aa0.37□□□□□ -2.35
NIP1YMR309C SEC27P41811 889 aaKnown RBP0.37□□□□□ -2.35
NIP1YMR309C CPR7P47103 393 aa0.37□□□□□ -2.35
NIP1YMR309C RPN14P53196 417 aa0.37□□□□□ -2.35
NIP1YMR309C RPT4P53549 437 aaKnown RBP0.37□□□□□ -2.35
NIP1YMR309C SVL3Q03088 825 aaKnown RBP0.37□□□□□ -2.35
NIP1YMR309C INP2Q03824 705 aa0.37□□□□□ -2.35
NIP1YMR309C YHC1Q05900 231 aaKnown RBP0.37□□□□□ -2.35
NIP1YMR309C MMR1Q06324 491 aa0.37□□□□□ -2.35
NIP1YMR309C RRI2Q12348 645 aa0.37□□□□□ -2.35
NIP1YMR309C COX3P00420 269 aa0.36□□□□□ -2.35
NIP1YMR309C RPL16AP26784 199 aaKnown RBP0.36□□□□□ -2.35
NIP1YMR309C PHO91P27514 894 aa0.36□□□□□ -2.35
NIP1YMR309C ERV1P27882 189 aa0.36□□□□□ -2.35
NIP1YMR309C UTR5P32630 166 aa0.36□□□□□ -2.35
NIP1YMR309C NRP1P32770 719 aaKnown RBP RIP-Chip data0.36□□□□□ -2.35not detected
NIP1YMR309C TOA1P32773 286 aa0.36□□□□□ -2.35
NIP1YMR309C AGA2P32781 87 aa0.36□□□□□ -2.35
NIP1YMR309C BYE1P36106 594 aa0.36□□□□□ -2.35
NIP1YMR309C JNM1P36224 373 aa0.36□□□□□ -2.35
NIP1YMR309C GPX2P38143 162 aa0.36□□□□□ -2.35
NIP1YMR309C TRR2P38816 342 aa0.36□□□□□ -2.35
NIP1YMR309C VHS2P40463 436 aa0.36□□□□□ -2.35
NIP1YMR309C HIT1P46973 164 aa0.36□□□□□ -2.35
NIP1YMR309C BNI5P53890 448 aaKnown RBP0.36□□□□□ -2.35
NIP1YMR309C SLT2Q00772 484 aa0.36□□□□□ -2.35
NIP1YMR309C PRP42Q03776 544 aaKnown RBP0.36□□□□□ -2.35
NIP1YMR309C RPN9Q04062 393 aaKnown RBP0.36□□□□□ -2.35
NIP1YMR309C YDL109CQ12103 647 aa0.36□□□□□ -2.35
NIP1YMR309C RRG1Q12167 365 aaPredicted RBP0.36□□□□□ -2.35
NIP1YMR309C YOR338WQ99326 363 aa0.36□□□□□ -2.35
NIP1YMR309C UNG1P12887 359 aa0.36□□□□□ -2.35
NIP1YMR309C CKA2P19454 339 aa0.36□□□□□ -2.35
NIP1YMR309C GEX1P25596 615 aa0.36□□□□□ -2.35
NIP1YMR309C ASC1P38011 319 aaKnown RBP0.36□□□□□ -2.35
NIP1YMR309C KAP104P38217 918 aaKnown RBP0.36□□□□□ -2.35
NIP1YMR309C ZTA1P38230 334 aaKnown RBP0.36□□□□□ -2.35
NIP1YMR309C FAD1P38913 306 aa0.36□□□□□ -2.35
NIP1YMR309C CTK3P46963 296 aaPredicted RBP0.36□□□□□ -2.35
NIP1YMR309C ASG7P46993 209 aa0.36□□□□□ -2.35
NIP1YMR309C STE24P47154 453 aa0.36□□□□□ -2.35
NIP1YMR309C ROG1P53118 685 aa0.36□□□□□ -2.35
NIP1YMR309C CDH1P53197 566 aa0.36□□□□□ -2.35
NIP1YMR309C ZRG17P53735 605 aa0.36□□□□□ -2.35
NIP1YMR309C COS1P53822 381 aa0.36□□□□□ -2.35
NIP1YMR309C VAC7P53950 1165 aa0.36□□□□□ -2.35
NIP1YMR309C ECM7Q06200 448 aa0.36□□□□□ -2.35
NIP1YMR309C YOL029CQ08187 201 aa0.36□□□□□ -2.35
NIP1YMR309C HRT1Q08273 121 aa0.36□□□□□ -2.35
NIP1YMR309C ATP16Q12165 160 aa0.36□□□□□ -2.35
NIP1YMR309C SFM1Q12314 213 aa0.36□□□□□ -2.35
NIP1YMR309C YAL067W-AQ8TGK6 75 aa0.36□□□□□ -2.35
NIP1YMR309C HEM4P06174 275 aa0.35□□□□□ -2.35
NIP1YMR309C ARO3P14843 370 aaKnown RBP0.35□□□□□ -2.35
NIP1YMR309C BGL2P15703 313 aaKnown RBP0.35□□□□□ -2.35
NIP1YMR309C PHO84P25297 587 aaKnown RBP0.35□□□□□ -2.35
NIP1YMR309C RPN12P32496 274 aa0.35□□□□□ -2.35
NIP1YMR309C RAD23P32628 398 aaKnown RBP0.35□□□□□ -2.35
NIP1YMR309C ANP1P32629 500 aa0.35□□□□□ -2.35
NIP1YMR309C YGP1P38616 354 aaKnown RBP0.35□□□□□ -2.35
NIP1YMR309C STN1P38960 494 aa0.35□□□□□ -2.35
NIP1YMR309C GGC1P38988 300 aa0.35□□□□□ -2.35
NIP1YMR309C HEM14P40012 539 aa0.35□□□□□ -2.35
NIP1YMR309C ZIM17P42844 174 aa0.35□□□□□ -2.35
NIP1YMR309C YJL144WP47009 104 aa0.35□□□□□ -2.35
NIP1YMR309C SEH1P53011 349 aaKnown RBP0.35□□□□□ -2.35
NIP1YMR309C RMI1Q02685 241 aa0.35□□□□□ -2.35
NIP1YMR309C TAF11Q04226 346 aa0.35□□□□□ -2.35
NIP1YMR309C UTP15Q04305 513 aaKnown RBP0.35□□□□□ -2.35
NIP1YMR309C CDD1Q06549 142 aa0.35□□□□□ -2.35
NIP1YMR309C NSE1Q07913 336 aa0.35□□□□□ -2.35
NIP1YMR309C LDS2Q08218 356 aa0.35□□□□□ -2.35
NIP1YMR309C YOR376WQ08900 122 aa0.35□□□□□ -2.35
NIP1YMR309C HIF1Q12373 385 aa0.35□□□□□ -2.35
NIP1YMR309C ISA2Q12425 185 aa0.35□□□□□ -2.35
NIP1YMR309C CLB1P24868 471 aa0.35□□□□□ -2.35
NIP1YMR309C NIP1P32497 812 aaKnown RBP0.35□□□□□ -2.35
NIP1YMR309C YSC83P32792 385 aa0.35□□□□□ -2.35
NIP1YMR309C CYM1P32898 989 aa0.35□□□□□ -2.35
NIP1YMR309C SRB2P34162 210 aa0.35□□□□□ -2.35
NIP1YMR309C DBP7P36120 742 aaKnown RBP0.35□□□□□ -2.35
NIP1YMR309C QDR3P38227 689 aa0.35□□□□□ -2.35
NIP1YMR309C SHE3P38272 425 aaKnown RBP0.35□□□□□ -2.35
NIP1YMR309C BDH1P39714 382 aa0.35□□□□□ -2.35
Retrieved 100 of 5,963 RNA–protein pairs in 25.2 ms