RNA–Protein interactions for RNA: YLR440C

SEC39, Transcript of Component of the Dsl1p tethering complex, yeast

Gene SEC39, Length 2,130 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC39	YLR440C	WSC3	Q12215	556 aa		4.78	□□□□□ -1.64
SEC39	YLR440C	AI3	P03877	415 aa		4.77	□□□□□ -1.65
SEC39	YLR440C	RHO1	P06780	209 aa	Known RBP	4.77	□□□□□ -1.65
SEC39	YLR440C	SCJ1	P25303	377 aa		4.77	□□□□□ -1.65
SEC39	YLR440C	MGR1	P25573	417 aa		4.77	□□□□□ -1.65
SEC39	YLR440C	RPS5	P26783	225 aa	Known RBP	4.77	□□□□□ -1.65
SEC39	YLR440C	IMP3	P32899	183 aa	Predicted RBP	4.77	□□□□□ -1.65
SEC39	YLR440C	RRT2	P38332	387 aa		4.77	□□□□□ -1.65
SEC39	YLR440C	YHR122W	P38829	231 aa		4.77	□□□□□ -1.65
SEC39	YLR440C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.77	□□□□□ -1.65	not detected
SEC39	YLR440C	NPT1	P39683	429 aa	Known RBP	4.77	□□□□□ -1.65
SEC39	YLR440C	GPB2	P39717	880 aa		4.77	□□□□□ -1.65
SEC39	YLR440C	YEL020C	P39994	560 aa		4.77	□□□□□ -1.65
SEC39	YLR440C	BAP3	P41815	604 aa		4.77	□□□□□ -1.65
SEC39	YLR440C	HXT10	P43581	546 aa		4.77	□□□□□ -1.65
SEC39	YLR440C	GUF1	P46943	645 aa		4.77	□□□□□ -1.65
SEC39	YLR440C	YJR030C	P47101	745 aa		4.77	□□□□□ -1.65
SEC39	YLR440C	YJR079W	P47126	109 aa		4.77	□□□□□ -1.65
SEC39	YLR440C	YPL113C	Q02961	396 aa		4.77	□□□□□ -1.65
SEC39	YLR440C	TRS31	Q03337	283 aa		4.77	□□□□□ -1.65
SEC39	YLR440C	RRG8	Q06109	277 aa		4.77	□□□□□ -1.65
SEC39	YLR440C	YPS7	Q06325	596 aa		4.77	□□□□□ -1.65
SEC39	YLR440C	ACK1	Q07622	623 aa	Predicted RBP	4.77	□□□□□ -1.65
SEC39	YLR440C	SRL2	Q12020	392 aa		4.77	□□□□□ -1.65
SEC39	YLR440C	YPR027C	Q12079	277 aa		4.77	□□□□□ -1.65
SEC39	YLR440C	YPL066W	Q12194	479 aa		4.77	□□□□□ -1.65
SEC39	YLR440C	TPT1	Q12272	230 aa	Known RBP	4.77	□□□□□ -1.65
SEC39	YLR440C	URA3	P03962	267 aa		4.76	□□□□□ -1.65
SEC39	YLR440C	HIS5	P07172	385 aa		4.76	□□□□□ -1.65
SEC39	YLR440C	TUB3	P09734	445 aa	Known RBP	4.76	□□□□□ -1.65
SEC39	YLR440C	SEC12	P11655	471 aa		4.76	□□□□□ -1.65
SEC39	YLR440C	SEC59	P20048	519 aa		4.76	□□□□□ -1.65
SEC39	YLR440C	DAL2	P25335	343 aa		4.76	□□□□□ -1.65
SEC39	YLR440C	YUR1	P26725	428 aa		4.76	□□□□□ -1.65
SEC39	YLR440C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	4.76	□□□□□ -1.65	not detected
SEC39	YLR440C	HYM1	P32464	399 aa		4.76	□□□□□ -1.65
SEC39	YLR440C	RGT1	P32862	1170 aa		4.76	□□□□□ -1.65
SEC39	YLR440C	TCD2	P36101	447 aa	Known RBP	4.76	□□□□□ -1.65
SEC39	YLR440C	MRPL3	P36516	390 aa		4.76	□□□□□ -1.65
SEC39	YLR440C	YBR197C	P38306	217 aa		4.76	□□□□□ -1.65
SEC39	YLR440C	VHC1	P38329	1120 aa		4.76	□□□□□ -1.65
SEC39	YLR440C	YHR112C	P38716	378 aa		4.76	□□□□□ -1.65
SEC39	YLR440C	TRM5	P38793	499 aa		4.76	□□□□□ -1.65
SEC39	YLR440C	NPP2	P39997	493 aa		4.76	□□□□□ -1.65
SEC39	YLR440C	SLZ1	P40167	298 aa		4.76	□□□□□ -1.65
SEC39	YLR440C	PSF2	P40359	213 aa		4.76	□□□□□ -1.65
SEC39	YLR440C	YJL171C	P46992	396 aa		4.76	□□□□□ -1.65
SEC39	YLR440C	RPA34	P47006	233 aa	Predicted RBP	4.76	□□□□□ -1.65
SEC39	YLR440C	GPI14	P47088	403 aa	Known RBP	4.76	□□□□□ -1.65
SEC39	YLR440C	YPT32	P51996	222 aa	Known RBP	4.76	□□□□□ -1.65
SEC39	YLR440C	YGL114W	P53134	725 aa		4.76	□□□□□ -1.65
SEC39	YLR440C	RHO5	P53879	331 aa	Known RBP	4.76	□□□□□ -1.65
SEC39	YLR440C	YCL001W-A	P87012	153 aa		4.76	□□□□□ -1.65
SEC39	YLR440C	APC4	Q04601	652 aa		4.76	□□□□□ -1.65
SEC39	YLR440C	CDC73	Q06697	393 aa		4.76	□□□□□ -1.65
SEC39	YLR440C	YDL086W	Q07505	273 aa		4.76	□□□□□ -1.65
SEC39	YLR440C	YOR365C	Q08844	703 aa		4.76	□□□□□ -1.65
SEC39	YLR440C	PER33	Q12144	273 aa		4.76	□□□□□ -1.65
SEC39	YLR440C	FMP16	Q12497	93 aa		4.76	□□□□□ -1.65
SEC39	YLR440C	FSH3	Q99369	266 aa		4.76	□□□□□ -1.65
SEC39	YLR440C	HAP2	P06774	265 aa		4.76	□□□□□ -1.65
SEC39	YLR440C	GCR1	P07261	785 aa		4.76	□□□□□ -1.65
SEC39	YLR440C	MTF1	P14908	341 aa	Known RBP	4.76	□□□□□ -1.65
SEC39	YLR440C	EXG1	P23776	448 aa	Known RBP	4.76	□□□□□ -1.65
SEC39	YLR440C	RNP1	P32385	249 aa		4.76	□□□□□ -1.65
SEC39	YLR440C	YKR078W	P36158	585 aa	Known RBP	4.76	□□□□□ -1.65
SEC39	YLR440C	TAT1	P38085	619 aa		4.76	□□□□□ -1.65
SEC39	YLR440C	BNA4	P38169	460 aa		4.76	□□□□□ -1.65
SEC39	YLR440C	RRN10	P38204	145 aa		4.76	□□□□□ -1.65
SEC39	YLR440C	SSP120	P39931	234 aa	Known RBP	4.76	□□□□□ -1.65
SEC39	YLR440C	ERG28	P40030	148 aa		4.76	□□□□□ -1.65
SEC39	YLR440C	LYS20	P48570	428 aa	Known RBP	4.76	□□□□□ -1.65
SEC39	YLR440C	APT1	P49435	187 aa	Known RBP	4.76	□□□□□ -1.65
SEC39	YLR440C	SWC4	P53201	476 aa		4.76	□□□□□ -1.65
SEC39	YLR440C	ARG5,6	Q01217	863 aa		4.76	□□□□□ -1.65
SEC39	YLR440C	RPS15	Q01855	142 aa	Known RBP	4.76	□□□□□ -1.65
SEC39	YLR440C	YDR124W	Q04608	324 aa		4.76	□□□□□ -1.65
SEC39	YLR440C	YDR278C	Q05612	105 aa		4.76	□□□□□ -1.65
SEC39	YLR440C	PEX30	Q06169	523 aa		4.76	□□□□□ -1.65
SEC39	YLR440C	SSK1	Q07084	712 aa		4.76	□□□□□ -1.65
SEC39	YLR440C	PAM18	Q07914	168 aa		4.76	□□□□□ -1.65
SEC39	YLR440C	TMA16	Q08687	178 aa		4.76	□□□□□ -1.65
SEC39	YLR440C	YPL257W	Q08974	193 aa		4.76	□□□□□ -1.65
SEC39	YLR440C	YPR063C	Q12160	140 aa		4.76	□□□□□ -1.65
SEC39	YLR440C	WTM1	Q12363	437 aa	Known RBP	4.76	□□□□□ -1.65
SEC39	YLR440C	YHR213W-A	Q8TGT4	77 aa		4.76	□□□□□ -1.65
SEC39	YLR440C	YBR126W-A	Q8TGU7	68 aa		4.76	□□□□□ -1.65
SEC39	YLR440C	QCR7	P00128	127 aa		4.75	□□□□□ -1.65
SEC39	YLR440C	HEM15	P16622	393 aa		4.75	□□□□□ -1.65
SEC39	YLR440C	CBT1	P36038	271 aa	Predicted RBP	4.75	□□□□□ -1.65
SEC39	YLR440C	ZTA1	P38230	334 aa	Known RBP	4.75	□□□□□ -1.65
SEC39	YLR440C	COS8	P38723	381 aa		4.75	□□□□□ -1.65
SEC39	YLR440C	LCP5	P40079	357 aa	Predicted RBP	4.75	□□□□□ -1.65
SEC39	YLR440C	COX15	P40086	486 aa		4.75	□□□□□ -1.65
SEC39	YLR440C	YIL108W	P40483	696 aa	Known RBP	4.75	□□□□□ -1.65
SEC39	YLR440C	DOC1	P53068	250 aa		4.75	□□□□□ -1.65
SEC39	YLR440C	COG7	P53195	279 aa		4.75	□□□□□ -1.65
SEC39	YLR440C	YNR066C	P53752	436 aa		4.75	□□□□□ -1.65
SEC39	YLR440C	ECM9	Q02202	377 aa		4.75	□□□□□ -1.65
SEC39	YLR440C	PFA5	Q03289	374 aa		4.75	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 34.1 ms