RNA–Protein interactions for RNA: YKL057C

NUP120, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP120, Length 3,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP120YKL057C MMS21P38632 267 aa1.79□□□□□ -2.12
NUP120YKL057C LSM5P40089 93 aaKnown RBP1.79□□□□□ -2.12
NUP120YKL057C YPR091CQ06833 770 aa1.79□□□□□ -2.12
NUP120YKL057C SRO7Q12038 1033 aa1.79□□□□□ -2.12
NUP120YKL057C JID1Q12350 301 aa1.79□□□□□ -2.12
NUP120YKL057C SCH9P11792 824 aaKnown RBP1.79□□□□□ -2.12
NUP120YKL057C AMD1P15274 810 aaKnown RBP1.79□□□□□ -2.12
NUP120YKL057C INO2P26798 304 aa1.79□□□□□ -2.12
NUP120YKL057C LDS1P31379 325 aa1.79□□□□□ -2.12
NUP120YKL057C BMT2P38278 337 aa1.79□□□□□ -2.12
NUP120YKL057C ECM34P38728 170 aa1.79□□□□□ -2.12
NUP120YKL057C APE4P38821 490 aa1.79□□□□□ -2.12
NUP120YKL057C IDP2P41939 412 aa1.79□□□□□ -2.12
NUP120YKL057C RPL21AQ02753 160 aaKnown RBP1.79□□□□□ -2.12
NUP120YKL057C YMR027WQ04371 470 aa1.79□□□□□ -2.12
NUP120YKL057C MSK1P32048 576 aa1.78□□□□□ -2.12
NUP120YKL057C CSE2P33308 149 aa1.78□□□□□ -2.12
NUP120YKL057C KRE9P39005 276 aa1.78□□□□□ -2.12
NUP120YKL057C PRP39P39682 629 aaKnown RBP1.78□□□□□ -2.12
NUP120YKL057C EMC2P47133 292 aaKnown RBP1.78□□□□□ -2.12
NUP120YKL057C YGL262WP53054 175 aa1.78□□□□□ -2.12
NUP120YKL057C YGL242CP53066 181 aa1.78□□□□□ -2.12
NUP120YKL057C SLT2Q00772 484 aa1.78□□□□□ -2.12
NUP120YKL057C YBR298C-AQ8TGK4 73 aa1.78□□□□□ -2.12
NUP120YKL057C YSR3P23501 404 aa1.78□□□□□ -2.12
NUP120YKL057C ZRT1P32804 376 aa1.78□□□□□ -2.12
NUP120YKL057C LRP1P38801 184 aaKnown RBP1.78□□□□□ -2.12
NUP120YKL057C KTR5P53966 522 aaPredicted RBP1.78□□□□□ -2.12
NUP120YKL057C ADD37Q03233 198 aa1.78□□□□□ -2.12
NUP120YKL057C FCY22Q12119 530 aa1.78□□□□□ -2.12
NUP120YKL057C RBD2Q12270 262 aa1.78□□□□□ -2.12
NUP120YKL057C SPS100P13130 326 aa1.77□□□□□ -2.13
NUP120YKL057C LIN1P38852 340 aaPredicted RBP1.77□□□□□ -2.13
NUP120YKL057C PES4P39684 611 aa1.77□□□□□ -2.13
NUP120YKL057C YAL037WP39728 267 aa1.77□□□□□ -2.13
NUP120YKL057C PRP42Q03776 544 aaKnown RBP1.77□□□□□ -2.13
NUP120YKL057C MRX8Q05473 314 aa1.77□□□□□ -2.13
NUP120YKL057C RRG7Q08774 242 aaPredicted RBP1.77□□□□□ -2.13
NUP120YKL057C CCT2P39076 527 aaKnown RBP1.77□□□□□ -2.13
NUP120YKL057C MIG3P39943 394 aa1.77□□□□□ -2.13
NUP120YKL057C ENT5Q03769 411 aaKnown RBP1.77□□□□□ -2.13
NUP120YKL057C SRL2Q12020 392 aa1.77□□□□□ -2.13
NUP120YKL057C ADE4P04046 510 aaKnown RBP1.77□□□□□ -2.13
NUP120YKL057C RNA1P11745 407 aaKnown RBP1.77□□□□□ -2.13
NUP120YKL057C NAT1P12945 854 aaKnown RBP1.77□□□□□ -2.13
NUP120YKL057C PAN6P40459 309 aa1.77□□□□□ -2.13
NUP120YKL057C EGT2P42835 1041 aa1.77□□□□□ -2.13
NUP120YKL057C YFL012WP43580 148 aa1.77□□□□□ -2.13
NUP120YKL057C SDT1P53078 280 aa1.77□□□□□ -2.13
NUP120YKL057C ARC18Q05933 178 aaKnown RBP1.77□□□□□ -2.13
NUP120YKL057C CUE5Q08412 411 aaKnown RBP1.77□□□□□ -2.13
NUP120YKL057C RPS14AP06367 137 aaKnown RBP1.76□□□□□ -2.13
NUP120YKL057C SWD2P36104 329 aaPredicted RBP1.76□□□□□ -2.13
NUP120YKL057C RPS14BP39516 138 aaKnown RBP1.76□□□□□ -2.13
NUP120YKL057C POM33Q12164 279 aa1.76□□□□□ -2.13
NUP120YKL057C NCE102Q12207 173 aaRIP-Chip data1.76□□□□□ -2.13not detected
NUP120YKL057C YGK3Q12222 375 aaPredicted RBP1.76□□□□□ -2.13
NUP120YKL057C IZH4Q99393 312 aa1.76□□□□□ -2.13
NUP120YKL057C STE7P06784 515 aa1.76□□□□□ -2.13
NUP120YKL057C TAL1P15019 335 aaKnown RBP1.76□□□□□ -2.13
NUP120YKL057C VMA5P31412 392 aaKnown RBP1.76□□□□□ -2.13
NUP120YKL057C ANP1P32629 500 aa1.76□□□□□ -2.13
NUP120YKL057C YKL097CP34245 136 aa1.76□□□□□ -2.13
NUP120YKL057C KTI12P34253 313 aaKnown RBP1.76□□□□□ -2.13
NUP120YKL057C LEU5P38702 357 aa1.76□□□□□ -2.13
NUP120YKL057C PMT5P52867 743 aa1.76□□□□□ -2.13
NUP120YKL057C YGR250CP53316 781 aaKnown RBP1.76□□□□□ -2.13
NUP120YKL057C HXT11P54862 567 aa1.76□□□□□ -2.13
NUP120YKL057C LDB17Q12342 491 aa1.76□□□□□ -2.13
NUP120YKL057C YMR230W-AQ3E7B5 62 aa1.76□□□□□ -2.13
NUP120YKL057C SUP35P05453 685 aaKnown RBP1.75□□□□□ -2.13
NUP120YKL057C RNR2P09938 399 aaKnown RBP1.75□□□□□ -2.13
NUP120YKL057C SEC1P30619 724 aaKnown RBP1.75□□□□□ -2.13
NUP120YKL057C KAR9P32526 644 aa1.75□□□□□ -2.13
NUP120YKL057C MRPS9P38120 278 aa1.75□□□□□ -2.13
NUP120YKL057C MIX23P38162 196 aa1.75□□□□□ -2.13
NUP120YKL057C YPI1P43587 155 aa1.75□□□□□ -2.13
NUP120YKL057C MST27P53176 234 aa1.75□□□□□ -2.13
NUP120YKL057C RPS18AP0CX55 146 aaKnown RBP1.75□□□□□ -2.13
NUP120YKL057C RPS18BP0CX56 146 aaPredicted RBP1.75□□□□□ -2.13
NUP120YKL057C THR4P16120 514 aaKnown RBP1.75□□□□□ -2.13
NUP120YKL057C CDC23P16522 626 aa1.75□□□□□ -2.13
NUP120YKL057C YIL012WP40551 113 aa1.75□□□□□ -2.13
NUP120YKL057C YGR266WP53326 701 aa1.75□□□□□ -2.13
NUP120YKL057C SLG1P54867 378 aa1.75□□□□□ -2.13
NUP120YKL057C RAX1Q08760 435 aa1.75□□□□□ -2.13
NUP120YKL057C RPS19AP07280 144 aaKnown RBP1.75□□□□□ -2.13
NUP120YKL057C RPS19BP07281 144 aaPredicted RBP1.75□□□□□ -2.13
NUP120YKL057C PUP2P32379 260 aa1.75□□□□□ -2.13
NUP120YKL057C DPH5P32469 300 aaPredicted RBP1.75□□□□□ -2.13
NUP120YKL057C MCR1P36060 302 aaKnown RBP1.75□□□□□ -2.13
NUP120YKL057C ATG7P38862 630 aa1.75□□□□□ -2.13
NUP120YKL057C BIO3P50277 480 aa1.75□□□□□ -2.13
NUP120YKL057C YGL039WP53183 348 aaKnown RBP1.75□□□□□ -2.13
NUP120YKL057C MRX11Q03079 207 aa1.75□□□□□ -2.13
NUP120YKL057C TDA1Q03533 586 aa1.75□□□□□ -2.13
NUP120YKL057C MSC3Q05812 728 aa1.75□□□□□ -2.13
NUP120YKL057C TMC1Q08422 150 aaPredicted RBP1.75□□□□□ -2.13
NUP120YKL057C VMA2P16140 517 aaKnown RBP1.74□□□□□ -2.13
NUP120YKL057C ZRC1P20107 442 aa1.74□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 36.4 ms