RNA–Protein interactions for RNA: YKL010C

UFD4, Transcript of Ubiquitin-protein ligase (E3), yeastyeast

Gene UFD4, Length 4,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD4YKL010C MNN2P38069 597 aa2.02□□□□□ -2.09
UFD4YKL010C GEP4P38812 185 aa2.02□□□□□ -2.09
UFD4YKL010C NVJ1P38881 321 aa2.02□□□□□ -2.09
UFD4YKL010C YHR219WP38900 624 aa2.02□□□□□ -2.09
UFD4YKL010C MLH1P38920 769 aa2.02□□□□□ -2.09
UFD4YKL010C ERG10P41338 398 aaKnown RBP2.02□□□□□ -2.09
UFD4YKL010C SNX4P47057 423 aa2.02□□□□□ -2.09
UFD4YKL010C YJR030CP47101 745 aa2.02□□□□□ -2.09
UFD4YKL010C PYK2P52489 506 aaKnown RBP2.02□□□□□ -2.09
UFD4YKL010C RAI1P53063 387 aaKnown RBP2.02□□□□□ -2.09
UFD4YKL010C PAU12P53343 120 aa2.02□□□□□ -2.09
UFD4YKL010C MSS11Q03825 758 aa2.02□□□□□ -2.09
UFD4YKL010C RGC1Q06108 1083 aaKnown RBP2.02□□□□□ -2.09
UFD4YKL010C DTD1Q07648 150 aaKnown RBP2.02□□□□□ -2.09
UFD4YKL010C YPR022CQ12139 1133 aa2.02□□□□□ -2.09
UFD4YKL010C DBP10Q12389 995 aaKnown RBP2.02□□□□□ -2.09
UFD4YKL010C HTZ1Q12692 134 aaKnown RBP2.02□□□□□ -2.09
UFD4YKL010C CYR1P08678 2026 aaKnown RBP2.02□□□□□ -2.09
UFD4YKL010C SEM1O94742 89 aa2.02□□□□□ -2.09
UFD4YKL010C STE12P13574 688 aa2.02□□□□□ -2.09
UFD4YKL010C PHO80P20052 293 aa2.02□□□□□ -2.09
UFD4YKL010C EPT1P22140 391 aa2.02□□□□□ -2.09
UFD4YKL010C YCR102CP25608 368 aa2.02□□□□□ -2.09
UFD4YKL010C ISC10P32645 267 aa2.02□□□□□ -2.09
UFD4YKL010C PXA2P34230 853 aa2.02□□□□□ -2.09
UFD4YKL010C DED81P38707 554 aaKnown RBP2.02□□□□□ -2.09
UFD4YKL010C SBE22P38814 852 aa2.02□□□□□ -2.09
UFD4YKL010C MEP2P41948 499 aa2.02□□□□□ -2.09
UFD4YKL010C YGR210CP42942 411 aa2.02□□□□□ -2.09
UFD4YKL010C PPT1P53043 513 aa2.02□□□□□ -2.09
UFD4YKL010C YGR079WP53249 370 aa2.02□□□□□ -2.09
UFD4YKL010C GSH2Q08220 491 aa2.02□□□□□ -2.09
UFD4YKL010C YOR385WQ08909 290 aa2.02□□□□□ -2.09
UFD4YKL010C GRE1Q08969 168 aa2.02□□□□□ -2.09
UFD4YKL010C MNL2Q12205 849 aa2.02□□□□□ -2.09
UFD4YKL010C MPD2Q99316 277 aa2.02□□□□□ -2.09
UFD4YKL010C RPN13O13563 156 aa2.01□□□□□ -2.09
UFD4YKL010C TDH1P00360 332 aaKnown RBP2.01□□□□□ -2.09
UFD4YKL010C CDC31P06704 161 aaKnown RBP2.01□□□□□ -2.09
UFD4YKL010C CHO1P08456 276 aa2.01□□□□□ -2.09
UFD4YKL010C AAC3P18238 307 aa2.01□□□□□ -2.09
UFD4YKL010C PEX34P25584 144 aa2.01□□□□□ -2.09
UFD4YKL010C YMC1P32331 307 aa2.01□□□□□ -2.09
UFD4YKL010C ASF2P32448 525 aaPredicted RBP2.01□□□□□ -2.09
UFD4YKL010C SNU114P36048 1008 aaKnown RBP2.01□□□□□ -2.09
UFD4YKL010C YRO2P38079 344 aa2.01□□□□□ -2.09
UFD4YKL010C EFM1P38732 585 aa2.01□□□□□ -2.09
UFD4YKL010C RPP1P38786 293 aa2.01□□□□□ -2.09
UFD4YKL010C YHR097CP38809 366 aaKnown RBP2.01□□□□□ -2.09
UFD4YKL010C PET100P38958 111 aa2.01□□□□□ -2.09
UFD4YKL010C ICE2P40499 491 aa2.01□□□□□ -2.09
UFD4YKL010C TED1P40533 473 aa2.01□□□□□ -2.09
UFD4YKL010C PFS2P42841 465 aaKnown RBP2.01□□□□□ -2.09
UFD4YKL010C UBC12P52491 188 aa2.01□□□□□ -2.09
UFD4YKL010C NQM1P53228 333 aaPredicted RBP2.01□□□□□ -2.09
UFD4YKL010C INA17Q02888 182 aa2.01□□□□□ -2.09
UFD4YKL010C RIM13Q03792 727 aa2.01□□□□□ -2.09
UFD4YKL010C APC4Q04601 652 aa2.01□□□□□ -2.09
UFD4YKL010C YLR040CQ07988 224 aa2.01□□□□□ -2.09
UFD4YKL010C HSP42Q12329 375 aa2.01□□□□□ -2.09
UFD4YKL010C LEU4P06208 619 aaKnown RBP2.01□□□□□ -2.09
UFD4YKL010C CBS1P14066 229 aa2.01□□□□□ -2.09
UFD4YKL010C RPA135P22138 1203 aaKnown RBP2.01□□□□□ -2.09
UFD4YKL010C CAD1P24813 409 aaKnown RBP2.01□□□□□ -2.09
UFD4YKL010C GRR1P24814 1151 aa2.01□□□□□ -2.09
UFD4YKL010C RBK1P25332 333 aa2.01□□□□□ -2.09
UFD4YKL010C TRX3P25372 127 aa2.01□□□□□ -2.09
UFD4YKL010C STP22P25604 385 aa2.01□□□□□ -2.09
UFD4YKL010C ADE1P27616 306 aa2.01□□□□□ -2.09
UFD4YKL010C COQ2P32378 372 aa2.01□□□□□ -2.09
UFD4YKL010C DOA4P32571 926 aa2.01□□□□□ -2.09
UFD4YKL010C YOR062CP36025 268 aa2.01□□□□□ -2.09
UFD4YKL010C YKL071WP36086 256 aa2.01□□□□□ -2.09
UFD4YKL010C PCL5P38794 229 aa2.01□□□□□ -2.09
UFD4YKL010C YER184CP39961 794 aa2.01□□□□□ -2.09
UFD4YKL010C SIT1P39980 628 aa2.01□□□□□ -2.09
UFD4YKL010C YER137CP40083 148 aaKnown RBP2.01□□□□□ -2.09
UFD4YKL010C YER158CP40095 573 aa2.01□□□□□ -2.09
UFD4YKL010C GID8P40208 455 aa2.01□□□□□ -2.09
UFD4YKL010C MSE1P48525 536 aa2.01□□□□□ -2.09
UFD4YKL010C TPO2P53283 614 aa2.01□□□□□ -2.09
UFD4YKL010C HXT15P54854 567 aa2.01□□□□□ -2.09
UFD4YKL010C YMR130WQ04223 302 aa2.01□□□□□ -2.09
UFD4YKL010C RRN11Q04712 507 aa2.01□□□□□ -2.09
UFD4YKL010C BSC2Q05611 235 aa2.01□□□□□ -2.09
UFD4YKL010C RBD2Q12270 262 aa2.01□□□□□ -2.09
UFD4YKL010C PDH1Q12428 516 aaKnown RBP2.01□□□□□ -2.09
UFD4YKL010C LAG2Q92325 660 aa2.01□□□□□ -2.09
UFD4YKL010C COX3P00420 269 aa2.01□□□□□ -2.09
UFD4YKL010C RAS2P01120 322 aaKnown RBP2.01□□□□□ -2.09
UFD4YKL010C DST1P07273 309 aa2.01□□□□□ -2.09
UFD4YKL010C GAL7P08431 366 aa2.01□□□□□ -2.09
UFD4YKL010C RPL3P14126 387 aaKnown RBP2.01□□□□□ -2.09
UFD4YKL010C ARE1P25628 610 aa2.01□□□□□ -2.09
UFD4YKL010C CAM1P29547 415 aaKnown RBP2.01□□□□□ -2.09
UFD4YKL010C MGM101P32787 269 aaKnown RBP2.01□□□□□ -2.09
UFD4YKL010C PPG1P32838 368 aa2.01□□□□□ -2.09
UFD4YKL010C LHP1P33399 275 aaKnown RBP2.01□□□□□ -2.09
UFD4YKL010C MSN2P33748 704 aa2.01□□□□□ -2.09
UFD4YKL010C TCD2P36101 447 aaKnown RBP2.01□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 21.8 ms