RNA–Protein interactions for RNA: YJR001W

AVT1, Transcript of Vacuolar transporter, yeast

Gene AVT1, Length 1,809 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
AVT1	YJR001W	IFM1	P25038	676 aa		4.21	□□□□□ -1.74
AVT1	YJR001W	RRT12	P25381	491 aa		4.21	□□□□□ -1.74
AVT1	YJR001W	LRE1	P25579	583 aa	Known RBP	4.21	□□□□□ -1.74
AVT1	YJR001W	CWP1	P28319	239 aa		4.21	□□□□□ -1.74
AVT1	YJR001W	RAD14	P28519	371 aa		4.21	□□□□□ -1.74
AVT1	YJR001W	PEX3	P28795	441 aa		4.21	□□□□□ -1.74
AVT1	YJR001W	PRO3	P32263	286 aa	Known RBP	4.21	□□□□□ -1.74
AVT1	YJR001W	PRP21	P32524	280 aa	Predicted RBP	4.21	□□□□□ -1.74
AVT1	YJR001W	IMP3	P32899	183 aa	Predicted RBP	4.21	□□□□□ -1.74
AVT1	YJR001W	AIM29	P36154	155 aa		4.21	□□□□□ -1.74
AVT1	YJR001W	APT2	P36973	181 aa		4.21	□□□□□ -1.74
AVT1	YJR001W	ASC1	P38011	319 aa	Known RBP	4.21	□□□□□ -1.74
AVT1	YJR001W	ECM31	P38122	312 aa		4.21	□□□□□ -1.74
AVT1	YJR001W	YBP1	P38315	674 aa		4.21	□□□□□ -1.74
AVT1	YJR001W	TDA11	P38854	504 aa		4.21	□□□□□ -1.74
AVT1	YJR001W	CTK3	P46963	296 aa	Predicted RBP	4.21	□□□□□ -1.74
AVT1	YJR001W	AIM22	P47051	409 aa		4.21	□□□□□ -1.74
AVT1	YJR001W	PAC10	P48363	199 aa		4.21	□□□□□ -1.74
AVT1	YJR001W	BUD9	P53226	547 aa		4.21	□□□□□ -1.74
AVT1	YJR001W	LSC2	P53312	427 aa		4.21	□□□□□ -1.74
AVT1	YJR001W	ZRG17	P53735	605 aa		4.21	□□□□□ -1.74
AVT1	YJR001W	ARG5,6	Q01217	863 aa		4.21	□□□□□ -1.74
AVT1	YJR001W	RNY1	Q02933	434 aa	Known RBP	4.21	□□□□□ -1.74
AVT1	YJR001W	EKI1	Q03764	534 aa		4.21	□□□□□ -1.74
AVT1	YJR001W	HED1	Q03937	162 aa		4.21	□□□□□ -1.74
AVT1	YJR001W	PLM2	Q04383	521 aa		4.21	□□□□□ -1.74
AVT1	YJR001W	YPR078C	Q06813	372 aa		4.21	□□□□□ -1.74
AVT1	YJR001W	FRE5	Q08908	694 aa		4.21	□□□□□ -1.74
AVT1	YJR001W	YLR053C	Q12026	108 aa		4.21	□□□□□ -1.74
AVT1	YJR001W	PRS5	Q12265	496 aa	Known RBP	4.21	□□□□□ -1.74
AVT1	YJR001W	DCN1	Q12395	269 aa		4.21	□□□□□ -1.74
AVT1	YJR001W	YDL007C-A	Q2V2Q0	85 aa		4.21	□□□□□ -1.74
AVT1	YJR001W	ROM2	P51862	1356 aa	Known RBP	4.21	□□□□□ -1.74
AVT1	YJR001W	RIM15	P43565	1770 aa		4.21	□□□□□ -1.74
AVT1	YJR001W	TDH2	P00358	332 aa	Known RBP	4.21	□□□□□ -1.74
AVT1	YJR001W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	RIP-Chip
AVT1	YJR001W	CAR1	P00812	333 aa	Known RBP	4.21	□□□□□ -1.74
AVT1	YJR001W	ERG20	P08524	352 aa	Known RBP	4.21	□□□□□ -1.74
AVT1	YJR001W	MRP13	P12686	339 aa		4.21	□□□□□ -1.74
AVT1	YJR001W	PMR1	P13586	950 aa		4.21	□□□□□ -1.74
AVT1	YJR001W	CBS2	P14905	389 aa		4.21	□□□□□ -1.74
AVT1	YJR001W	COQ1	P18900	473 aa		4.21	□□□□□ -1.74
AVT1	YJR001W	SAR1	P20606	190 aa	Known RBP	4.21	□□□□□ -1.74
AVT1	YJR001W	CSM1	P25651	190 aa		4.21	□□□□□ -1.74
AVT1	YJR001W	LAC1	P28496	418 aa		4.21	□□□□□ -1.74
AVT1	YJR001W	YIM1	P28625	365 aa		4.21	□□□□□ -1.74
AVT1	YJR001W	TFC1	P32367	649 aa		4.21	□□□□□ -1.74
AVT1	YJR001W	UGP1	P32861	499 aa	Known RBP	4.21	□□□□□ -1.74
AVT1	YJR001W	RCN1	P36054	211 aa		4.21	□□□□□ -1.74
AVT1	YJR001W	RPF2	P36160	344 aa	Known RBP	4.21	□□□□□ -1.74
AVT1	YJR001W	PPS1	P38148	807 aa		4.21	□□□□□ -1.74
AVT1	YJR001W	ERG7	P38604	731 aa		4.21	□□□□□ -1.74
AVT1	YJR001W	PTC7	P38797	343 aa		4.21	□□□□□ -1.74
AVT1	YJR001W	YJL193W	P39542	402 aa		4.21	□□□□□ -1.74
AVT1	YJR001W	YER121W	P40076	114 aa		4.21	□□□□□ -1.74
AVT1	YJR001W	VRG4	P40107	337 aa		4.21	□□□□□ -1.74
AVT1	YJR001W	PDS1	P40316	373 aa	Predicted RBP	4.21	□□□□□ -1.74
AVT1	YJR001W	NBP35	P52920	328 aa		4.21	□□□□□ -1.74
AVT1	YJR001W	BUD17	P53727	317 aa		4.21	□□□□□ -1.74
AVT1	YJR001W	STD1	Q02794	444 aa		4.21	□□□□□ -1.74
AVT1	YJR001W	YPL080C	Q02826	108 aa		4.21	□□□□□ -1.74
AVT1	YJR001W	YDR476C	Q03362	224 aa		4.21	□□□□□ -1.74
AVT1	YJR001W	YMR074C	Q04773	145 aa		4.21	□□□□□ -1.74
AVT1	YJR001W	FMP42	Q04991	504 aa		4.21	□□□□□ -1.74
AVT1	YJR001W	ECM30	Q06673	1274 aa		4.21	□□□□□ -1.74
AVT1	YJR001W	YLR040C	Q07988	224 aa		4.21	□□□□□ -1.74
AVT1	YJR001W	RRP40	Q08285	240 aa	Known RBP	4.21	□□□□□ -1.74
AVT1	YJR001W	AIM41	Q12032	185 aa		4.21	□□□□□ -1.74
AVT1	YJR001W	SFM1	Q12314	213 aa		4.21	□□□□□ -1.74
AVT1	YJR001W	SNA3	P14359	133 aa		4.2	□□□□□ -1.74
AVT1	YJR001W	CNA1	P23287	553 aa		4.2	□□□□□ -1.74
AVT1	YJR001W	YUR1	P26725	428 aa		4.2	□□□□□ -1.74
AVT1	YJR001W	DCG1	P32460	244 aa		4.2	□□□□□ -1.74
AVT1	YJR001W	RAD23	P32628	398 aa	Known RBP	4.2	□□□□□ -1.74
AVT1	YJR001W	YKL071W	P36086	256 aa		4.2	□□□□□ -1.74
AVT1	YJR001W	CTF8	P38877	133 aa		4.2	□□□□□ -1.74
AVT1	YJR001W	SKN7	P38889	622 aa		4.2	□□□□□ -1.74
AVT1	YJR001W	FET3	P38993	636 aa		4.2	□□□□□ -1.74
AVT1	YJR001W	CCT2	P39076	527 aa	Known RBP	4.2	□□□□□ -1.74
AVT1	YJR001W	GIP2	P40036	548 aa		4.2	□□□□□ -1.74
AVT1	YJR001W	YKE4	P40544	346 aa		4.2	□□□□□ -1.74
AVT1	YJR001W	YGR201C	P42936	225 aa		4.2	□□□□□ -1.74
AVT1	YJR001W	PRM10	P42946	383 aa		4.2	□□□□□ -1.74
AVT1	YJR001W	EBS1	Q03466	884 aa	Known RBP	4.2	□□□□□ -1.74
AVT1	YJR001W	GIS1	Q03833	894 aa		4.2	□□□□□ -1.74
AVT1	YJR001W	SKI7	Q08491	747 aa	Predicted RBP	4.2	□□□□□ -1.74
AVT1	YJR001W	MET32	Q12041	191 aa		4.2	□□□□□ -1.74
AVT1	YJR001W	ELG1	Q12050	791 aa		4.2	□□□□□ -1.74
AVT1	YJR001W	MLH3	Q12083	715 aa		4.2	□□□□□ -1.74
AVT1	YJR001W	MF(ALPHA)1	P01149	165 aa		4.19	□□□□□ -1.74
AVT1	YJR001W	NHP6B	P11633	99 aa	Known RBP	4.19	□□□□□ -1.74
AVT1	YJR001W	ZRC1	P20107	442 aa		4.19	□□□□□ -1.74
AVT1	YJR001W	RSA4	P25382	515 aa	Known RBP	4.19	□□□□□ -1.74
AVT1	YJR001W	PBN1	P25580	416 aa		4.19	□□□□□ -1.74
AVT1	YJR001W	PHA2	P32452	334 aa		4.19	□□□□□ -1.74
AVT1	YJR001W	CLG1	P35190	452 aa		4.19	□□□□□ -1.74
AVT1	YJR001W	DTR1	P38125	572 aa		4.19	□□□□□ -1.74
AVT1	YJR001W	ECM8	P38246	354 aa		4.19	□□□□□ -1.74
AVT1	YJR001W	IML3	P38265	245 aa		4.19	□□□□□ -1.74
AVT1	YJR001W	PRS2	P38620	318 aa	Known RBP	4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 29.8 ms