RNA–Protein interactions for RNA: YGR143W

SKN1, Transcript of Protein involved in sphingolipid biosynthesis, yeastyeast

Gene SKN1, Length 2,316 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKN1YGR143W TPK2P06245 380 aa5.6□□□□□ -1.51
SKN1YGR143W MNE1P24720 663 aa5.6□□□□□ -1.51
SKN1YGR143W DAL2P25335 343 aa5.6□□□□□ -1.51
SKN1YGR143W SPS19P32573 292 aaKnown RBP5.6□□□□□ -1.51
SKN1YGR143W SPC34P36131 295 aa5.6□□□□□ -1.51
SKN1YGR143W MRPL4P36517 319 aa5.6□□□□□ -1.51
SKN1YGR143W SOL2P37262 315 aa5.6□□□□□ -1.51
SKN1YGR143W YBR056WP38081 501 aa5.6□□□□□ -1.51
SKN1YGR143W BIT2P38346 545 aa5.6□□□□□ -1.51
SKN1YGR143W RPL10P41805 221 aaKnown RBP5.6□□□□□ -1.51
SKN1YGR143W NMA2P53204 395 aa5.6□□□□□ -1.51
SKN1YGR143W TIM21P53220 239 aa5.6□□□□□ -1.51
SKN1YGR143W YAP1802P53309 568 aa5.6□□□□□ -1.51
SKN1YGR143W SOK2P53438 785 aaPredicted RBP5.6□□□□□ -1.51
SKN1YGR143W TIM44Q01852 431 aa5.6□□□□□ -1.51
SKN1YGR143W NAN1Q02931 896 aaKnown RBP5.6□□□□□ -1.51
SKN1YGR143W MSC2Q03455 724 aa5.6□□□□□ -1.51
SKN1YGR143W SEN15Q04675 128 aa5.6□□□□□ -1.51
SKN1YGR143W YHC1Q05900 231 aaKnown RBP5.6□□□□□ -1.51
SKN1YGR143W IZH3Q07959 543 aa5.6□□□□□ -1.51
SKN1YGR143W TGL5Q12043 749 aa5.6□□□□□ -1.51
SKN1YGR143W YOR304C-AO14468 76 aa5.59□□□□□ -1.51
SKN1YGR143W CHA1P25379 360 aaKnown RBP5.59□□□□□ -1.51
SKN1YGR143W RAD14P28519 371 aa5.59□□□□□ -1.51
SKN1YGR143W ISC10P32645 267 aa5.59□□□□□ -1.51
SKN1YGR143W SKT5P34226 696 aa5.59□□□□□ -1.51
SKN1YGR143W SSS1P35179 80 aa5.59□□□□□ -1.51
SKN1YGR143W YKL162CP36052 402 aa5.59□□□□□ -1.51
SKN1YGR143W TVP38P36164 337 aa5.59□□□□□ -1.51
SKN1YGR143W AIM46P38885 310 aa5.59□□□□□ -1.51
SKN1YGR143W AZR1P50080 613 aa5.59□□□□□ -1.51
SKN1YGR143W SHR3Q02774 210 aa5.59□□□□□ -1.51
SKN1YGR143W YMR099CQ03161 297 aaKnown RBP5.59□□□□□ -1.51
SKN1YGR143W MUS81Q04149 632 aaPredicted RBP5.59□□□□□ -1.51
SKN1YGR143W CSM3Q04659 317 aa5.59□□□□□ -1.51
SKN1YGR143W YLR297WQ05899 129 aa5.59□□□□□ -1.51
SKN1YGR143W EMG1Q06287 252 aaKnown RBP5.59□□□□□ -1.51
SKN1YGR143W YPR078CQ06813 372 aa5.59□□□□□ -1.51
SKN1YGR143W PSY3Q12318 242 aa5.59□□□□□ -1.51
SKN1YGR143W HRT3Q12347 344 aa5.59□□□□□ -1.51
SKN1YGR143W LPX1Q12405 387 aaKnown RBP5.59□□□□□ -1.51
SKN1YGR143W LDB19Q12502 818 aa5.59□□□□□ -1.51
SKN1YGR143W PTC5Q12511 572 aa5.59□□□□□ -1.51
SKN1YGR143W PAR32Q12515 295 aaKnown RBP5.59□□□□□ -1.51
SKN1YGR143W SEC12P11655 471 aa5.59□□□□□ -1.51
SKN1YGR143W SPO7P18410 259 aa5.59□□□□□ -1.51
SKN1YGR143W SAN1P22470 610 aa5.59□□□□□ -1.51
SKN1YGR143W MCM5P29496 775 aaKnown RBP5.59□□□□□ -1.51
SKN1YGR143W CYS4P32582 507 aaKnown RBP5.59□□□□□ -1.51
SKN1YGR143W AVT5P38176 459 aa5.59□□□□□ -1.51
SKN1YGR143W MLH1P38920 769 aa5.59□□□□□ -1.51
SKN1YGR143W DHH1P39517 506 aaKnown RBP5.59□□□□□ -1.51
SKN1YGR143W LAS21P40367 830 aa5.59□□□□□ -1.51
SKN1YGR143W GDS1P41913 522 aa5.59□□□□□ -1.51
SKN1YGR143W SSU1P41930 458 aa5.59□□□□□ -1.51
SKN1YGR143W OTU1P43558 301 aa5.59□□□□□ -1.51
SKN1YGR143W YNL034WP53963 612 aa5.59□□□□□ -1.51
SKN1YGR143W YNL018CP53976 612 aa5.59□□□□□ -1.51
SKN1YGR143W ARA2Q04212 335 aa5.59□□□□□ -1.51
SKN1YGR143W MRI1Q06489 411 aaKnown RBP5.59□□□□□ -1.51
SKN1YGR143W FMP25Q08023 583 aa5.59□□□□□ -1.51
SKN1YGR143W GRE1Q08969 168 aa5.59□□□□□ -1.51
SKN1YGR143W YLR053CQ12026 108 aa5.59□□□□□ -1.51
SKN1YGR143W REP2P03872 296 aa5.58□□□□□ -1.52
SKN1YGR143W PDX1P16451 410 aa5.58□□□□□ -1.52
SKN1YGR143W SEC59P20048 519 aa5.58□□□□□ -1.52
SKN1YGR143W PEX4P29340 183 aa5.58□□□□□ -1.52
SKN1YGR143W FAA1P30624 700 aaKnown RBP5.58□□□□□ -1.52
SKN1YGR143W NRP1P32770 719 aaKnown RBP RIP-Chip data5.58□□□□□ -1.52not detected
SKN1YGR143W COT1P32798 439 aa5.58□□□□□ -1.52
SKN1YGR143W SHM2P37291 469 aaKnown RBP5.58□□□□□ -1.52
SKN1YGR143W UBS1P38290 277 aa5.58□□□□□ -1.52
SKN1YGR143W YHK8P38776 514 aa5.58□□□□□ -1.52
SKN1YGR143W IPI1P38803 334 aaPredicted RBP5.58□□□□□ -1.52
SKN1YGR143W FAD1P38913 306 aa5.58□□□□□ -1.52
SKN1YGR143W TVP23P38962 199 aa5.58□□□□□ -1.52
SKN1YGR143W HMF1P40037 129 aaKnown RBP5.58□□□□□ -1.52
SKN1YGR143W LSM5P40089 93 aaKnown RBP5.58□□□□□ -1.52
SKN1YGR143W YFL040WP43562 540 aa5.58□□□□□ -1.52
SKN1YGR143W BIO3P50277 480 aa5.58□□□□□ -1.52
SKN1YGR143W MEP3P53390 489 aa5.58□□□□□ -1.52
SKN1YGR143W INN1P53901 409 aa5.58□□□□□ -1.52
SKN1YGR143W PRP38Q00723 242 aaPredicted RBP5.58□□□□□ -1.52
SKN1YGR143W PFA5Q03289 374 aa5.58□□□□□ -1.52
SKN1YGR143W TDA5Q06417 326 aaKnown RBP5.58□□□□□ -1.52
SKN1YGR143W HRD1Q08109 551 aa5.58□□□□□ -1.52
SKN1YGR143W ACM1Q08981 209 aa5.58□□□□□ -1.52
SKN1YGR143W UBR2Q07963 1872 aa5.58□□□□□ -1.52
SKN1YGR143W YPR117WQ06116 2489 aa5.58□□□□□ -1.52
SKN1YGR143W SCH9P11792 824 aaKnown RBP5.58□□□□□ -1.52
SKN1YGR143W CAP2P13517 287 aa5.58□□□□□ -1.52
SKN1YGR143W IDP1P21954 428 aaKnown RBP5.58□□□□□ -1.52
SKN1YGR143W POF1P25576 258 aa5.58□□□□□ -1.52
SKN1YGR143W ADE1P27616 306 aa5.58□□□□□ -1.52
SKN1YGR143W CAP1P28495 268 aaKnown RBP5.58□□□□□ -1.52
SKN1YGR143W AFG1P32317 509 aa5.58□□□□□ -1.52
SKN1YGR143W RNP1P32385 249 aa5.58□□□□□ -1.52
SKN1YGR143W YPT7P32939 208 aa5.58□□□□□ -1.52
SKN1YGR143W VBA5P36172 582 aa5.58□□□□□ -1.52
SKN1YGR143W VHC1P38329 1120 aa5.58□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms