RNA–Protein interactions for RNA: YGR048W

UFD1, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene UFD1, Length 1,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD1YGR048W PMA1P05030 918 aaKnown RBP7.64□□□□□ -1.19
UFD1YGR048W CDC7P06243 507 aa7.64□□□□□ -1.19
UFD1YGR048W SRD1P09007 221 aa7.64□□□□□ -1.19
UFD1YGR048W SNF6P18888 332 aa7.64□□□□□ -1.19
UFD1YGR048W YPK2P18961 677 aa7.64□□□□□ -1.19
UFD1YGR048W IDP1P21954 428 aaKnown RBP7.64□□□□□ -1.19
UFD1YGR048W YCL002CP25565 263 aa7.64□□□□□ -1.19
UFD1YGR048W MRPL9P31334 269 aa7.64□□□□□ -1.19
UFD1YGR048W SDH3P33421 198 aa7.64□□□□□ -1.19
UFD1YGR048W HSL7P38274 827 aa7.64□□□□□ -1.19
UFD1YGR048W UIP3P39547 235 aa7.64□□□□□ -1.19
UFD1YGR048W HPA3P39979 161 aa7.64□□□□□ -1.19
UFD1YGR048W ALG8P40351 577 aa7.64□□□□□ -1.19
UFD1YGR048W BAP3P41815 604 aa7.64□□□□□ -1.19
UFD1YGR048W GDS1P41913 522 aa7.64□□□□□ -1.19
UFD1YGR048W CAK1P43568 368 aaPredicted RBP7.64□□□□□ -1.19
UFD1YGR048W ZAP1P47043 880 aa7.64□□□□□ -1.19
UFD1YGR048W YAE1P47118 141 aaPredicted RBP7.64□□□□□ -1.19
UFD1YGR048W PAC10P48363 199 aa7.64□□□□□ -1.19
UFD1YGR048W ROG1P53118 685 aa7.64□□□□□ -1.19
UFD1YGR048W YPL066WQ12194 479 aa7.64□□□□□ -1.19
UFD1YGR048W YOR114WQ12219 294 aa7.64□□□□□ -1.19
UFD1YGR048W WTM1Q12363 437 aaKnown RBP7.64□□□□□ -1.19
UFD1YGR048W MDM12Q92328 271 aa7.64□□□□□ -1.19
UFD1YGR048W HBN1Q96VH4 193 aa7.64□□□□□ -1.19
UFD1YGR048W ADE4P04046 510 aaKnown RBP7.63□□□□□ -1.19
UFD1YGR048W SPT3P06844 337 aa7.63□□□□□ -1.19
UFD1YGR048W MET3P08536 511 aa7.63□□□□□ -1.19
UFD1YGR048W MATALPHA1P0CY06 175 aa7.63□□□□□ -1.19
UFD1YGR048W HMLALPHA1P0CY07 175 aa7.63□□□□□ -1.19
UFD1YGR048W NHP6BP11633 99 aaKnown RBP7.63□□□□□ -1.19
UFD1YGR048W ART10P18634 518 aaKnown RBP7.63□□□□□ -1.19
UFD1YGR048W CDC42P19073 191 aa7.63□□□□□ -1.19
UFD1YGR048W PUP1P25043 261 aa7.63□□□□□ -1.19
UFD1YGR048W SGF29P25554 259 aa7.63□□□□□ -1.19
UFD1YGR048W DHR2P36009 735 aaPredicted RBP7.63□□□□□ -1.19
UFD1YGR048W YKR075CP36155 307 aa7.63□□□□□ -1.19
UFD1YGR048W FLO10P36170 1169 aa7.63□□□□□ -1.19
UFD1YGR048W SOL2P37262 315 aa7.63□□□□□ -1.19
UFD1YGR048W CBR1P38626 284 aaKnown RBP7.63□□□□□ -1.19
UFD1YGR048W PAN5P38787 379 aa7.63□□□□□ -1.19
UFD1YGR048W POG1P40473 351 aa7.63□□□□□ -1.19
UFD1YGR048W IDP2P41939 412 aa7.63□□□□□ -1.19
UFD1YGR048W PFA3P42836 336 aa7.63□□□□□ -1.19
UFD1YGR048W SLS1P42900 643 aa7.63□□□□□ -1.19
UFD1YGR048W ATG18P43601 500 aa7.63□□□□□ -1.19
UFD1YGR048W CHA4P43634 648 aa7.63□□□□□ -1.19
UFD1YGR048W GTO1P48239 356 aa7.63□□□□□ -1.19
UFD1YGR048W MTR3P48240 250 aaPredicted RBP7.63□□□□□ -1.19
UFD1YGR048W PKP2P53170 491 aa7.63□□□□□ -1.19
UFD1YGR048W ERV29P53337 310 aa7.63□□□□□ -1.19
UFD1YGR048W IDP3P53982 420 aaKnown RBP7.63□□□□□ -1.19
UFD1YGR048W LAP3Q01532 483 aaKnown RBP RIP-Chip data7.63□□□□□ -1.19not detected
UFD1YGR048W HAS1Q03532 505 aaKnown RBP7.63□□□□□ -1.19
UFD1YGR048W OYE2Q03558 400 aaKnown RBP7.63□□□□□ -1.19
UFD1YGR048W GAS3Q03655 524 aa7.63□□□□□ -1.19
UFD1YGR048W LRS4Q04087 347 aaKnown RBP7.63□□□□□ -1.19
UFD1YGR048W UAF30Q08747 228 aa7.63□□□□□ -1.19
UFD1YGR048W AGC1Q12482 902 aa7.63□□□□□ -1.19
UFD1YGR048W YDR461C-AQ2V2P7 80 aa7.63□□□□□ -1.19
UFD1YGR048W FIG2P25653 1609 aa7.63□□□□□ -1.19
UFD1YGR048W KIN28P06242 306 aa7.62□□□□□ -1.19
UFD1YGR048W PEP4P07267 405 aaKnown RBP7.62□□□□□ -1.19
UFD1YGR048W TRP4P07285 380 aaPredicted RBP7.62□□□□□ -1.19
UFD1YGR048W YER152CP10356 443 aa7.62□□□□□ -1.19
UFD1YGR048W MTF1P14908 341 aaKnown RBP7.62□□□□□ -1.19
UFD1YGR048W DAL80P26343 269 aa7.62□□□□□ -1.19
UFD1YGR048W CAT2P32796 670 aaKnown RBP7.62□□□□□ -1.19
UFD1YGR048W EMP24P32803 203 aaKnown RBP7.62□□□□□ -1.19
UFD1YGR048W MSN2P33748 704 aa7.62□□□□□ -1.19
UFD1YGR048W SHP1P34223 423 aa7.62□□□□□ -1.19
UFD1YGR048W AIM46P38885 310 aa7.62□□□□□ -1.19
UFD1YGR048W RPN3P40016 523 aaKnown RBP7.62□□□□□ -1.19
UFD1YGR048W SPO73P40031 143 aa7.62□□□□□ -1.19
UFD1YGR048W LSM5P40089 93 aaKnown RBP7.62□□□□□ -1.19
UFD1YGR048W BUR6P40096 142 aa7.62□□□□□ -1.19
UFD1YGR048W LAS21P40367 830 aa7.62□□□□□ -1.19
UFD1YGR048W YIL108WP40483 696 aaKnown RBP7.62□□□□□ -1.19
UFD1YGR048W MND2P40577 368 aa7.62□□□□□ -1.19
UFD1YGR048W PRM10P42946 383 aa7.62□□□□□ -1.19
UFD1YGR048W CCC1P47818 322 aa7.62□□□□□ -1.19
UFD1YGR048W YNR065CP53751 1116 aa7.62□□□□□ -1.19
UFD1YGR048W MAP1Q01662 387 aaKnown RBP RIP-Chip data7.62□□□□□ -1.19not detected
UFD1YGR048W HDA2Q06629 674 aa7.62□□□□□ -1.19
UFD1YGR048W DDC1Q08949 612 aa7.62□□□□□ -1.19
UFD1YGR048W LAP2Q10740 671 aa7.62□□□□□ -1.19
UFD1YGR048W LPX1Q12405 387 aaKnown RBP7.62□□□□□ -1.19
UFD1YGR048W PSF1Q12488 208 aa7.62□□□□□ -1.19
UFD1YGR048W SFG1Q12507 346 aa7.62□□□□□ -1.19
UFD1YGR048W Q0142Q9ZZW4 58 aa7.62□□□□□ -1.19
UFD1YGR048W FLO1P32768 1537 aa7.62□□□□□ -1.19
UFD1YGR048W REV1P12689 985 aa7.61□□□□□ -1.19
UFD1YGR048W PET9P18239 318 aaKnown RBP7.61□□□□□ -1.19
UFD1YGR048W YCL068CP25593 260 aa7.61□□□□□ -1.19
UFD1YGR048W YCR090CP25654 182 aaKnown RBP7.61□□□□□ -1.19
UFD1YGR048W DEG1P31115 442 aaKnown RBP7.61□□□□□ -1.19
UFD1YGR048W CYS3P31373 394 aaKnown RBP7.61□□□□□ -1.19
UFD1YGR048W CDC5P32562 705 aa7.61□□□□□ -1.19
UFD1YGR048W PIN4P34217 668 aaKnown RBP RIP-Chip data7.61□□□□□ -1.19not detected
UFD1YGR048W GPT2P36148 743 aa7.61□□□□□ -1.19
Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms