RNA–Protein interactions for RNA: YGL172W

NUP49, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP49, Length 1,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP49YGL172W SNO3P43544 222 aa6.26□□□□□ -1.41
NUP49YGL172W FMP33P46998 180 aa6.26□□□□□ -1.41
NUP49YGL172W RMR1P53060 241 aa6.26□□□□□ -1.41
NUP49YGL172W ARI1P53111 347 aaKnown RBP6.26□□□□□ -1.41
NUP49YGL172W LCL3P53153 274 aa6.26□□□□□ -1.41
NUP49YGL172W RSM10Q03201 203 aa6.26□□□□□ -1.41
NUP49YGL172W RIM13Q03792 727 aa6.26□□□□□ -1.41
NUP49YGL172W SMA2Q04658 369 aa6.26□□□□□ -1.41
NUP49YGL172W NAT4Q04751 285 aa6.26□□□□□ -1.41
NUP49YGL172W SWA2Q06677 668 aa6.26□□□□□ -1.41
NUP49YGL172W YPL066WQ12194 479 aa6.26□□□□□ -1.41
NUP49YGL172W YPT1P01123 206 aaKnown RBP6.25□□□□□ -1.41
NUP49YGL172W RPL20AP0CX23 172 aaKnown RBP6.25□□□□□ -1.41
NUP49YGL172W RPL20BP0CX24 172 aaPredicted RBP6.25□□□□□ -1.41
NUP49YGL172W CBS1P14066 229 aa6.25□□□□□ -1.41
NUP49YGL172W NAR1P23503 491 aaKnown RBP6.25□□□□□ -1.41
NUP49YGL172W GRR1P24814 1151 aa6.25□□□□□ -1.41
NUP49YGL172W CTR86P25355 563 aa6.25□□□□□ -1.41
NUP49YGL172W STP22P25604 385 aa6.25□□□□□ -1.41
NUP49YGL172W BUD14P27637 709 aa6.25□□□□□ -1.41
NUP49YGL172W AST1P35183 429 aa6.25□□□□□ -1.41
NUP49YGL172W SPC34P36131 295 aa6.25□□□□□ -1.41
NUP49YGL172W MPM1P40364 252 aa6.25□□□□□ -1.41
NUP49YGL172W CUP9P41817 306 aa6.25□□□□□ -1.41
NUP49YGL172W APS3P47064 194 aa6.25□□□□□ -1.41
NUP49YGL172W AAD10P47182 288 aa6.25□□□□□ -1.41
NUP49YGL172W TWF1P53250 332 aa6.25□□□□□ -1.41
NUP49YGL172W MTQ1P53944 314 aa6.25□□□□□ -1.41
NUP49YGL172W NOG1Q02892 647 aaKnown RBP6.25□□□□□ -1.41
NUP49YGL172W YMR210WQ03649 449 aa6.25□□□□□ -1.41
NUP49YGL172W MDM30Q05930 598 aa6.25□□□□□ -1.41
NUP49YGL172W DBP9Q06218 594 aaKnown RBP6.25□□□□□ -1.41
NUP49YGL172W TPO4Q12256 659 aa6.25□□□□□ -1.41
NUP49YGL172W SFM1Q12314 213 aa6.25□□□□□ -1.41
NUP49YGL172W RPS21BQ3E754 87 aaKnown RBP6.25□□□□□ -1.41
NUP49YGL172W SAC7P17121 654 aa6.25□□□□□ -1.41
NUP49YGL172W THR1P17423 357 aaKnown RBP6.25□□□□□ -1.41
NUP49YGL172W YCK1P23291 538 aa6.25□□□□□ -1.41
NUP49YGL172W DMC1P25453 334 aa6.25□□□□□ -1.41
NUP49YGL172W LDB16P25587 256 aa6.25□□□□□ -1.41
NUP49YGL172W GSH1P32477 678 aa6.25□□□□□ -1.41
NUP49YGL172W NUF2P33895 451 aa6.25□□□□□ -1.41
NUP49YGL172W TOD6P34219 525 aa6.25□□□□□ -1.41
NUP49YGL172W YHL012WP38709 493 aa6.25□□□□□ -1.41
NUP49YGL172W YIL165CP40446 119 aa6.25□□□□□ -1.41
NUP49YGL172W MET28P40573 187 aa6.25□□□□□ -1.41
NUP49YGL172W IKS1P47042 667 aa6.25□□□□□ -1.41
NUP49YGL172W MRK1P50873 501 aa6.25□□□□□ -1.41
NUP49YGL172W ASI2P53895 289 aa6.25□□□□□ -1.41
NUP49YGL172W INP1Q03694 420 aa6.25□□□□□ -1.41
NUP49YGL172W AKR2Q12013 749 aa6.25□□□□□ -1.41
NUP49YGL172W REX3Q12090 404 aa6.25□□□□□ -1.41
NUP49YGL172W PSF1Q12488 208 aa6.25□□□□□ -1.41
NUP49YGL172W HEM13P11353 328 aaKnown RBP6.24□□□□□ -1.41
NUP49YGL172W SNF4P12904 322 aa6.24□□□□□ -1.41
NUP49YGL172W ORC2P32833 620 aa6.24□□□□□ -1.41
NUP49YGL172W SWH1P35845 1188 aa6.24□□□□□ -1.41
NUP49YGL172W YOR062CP36025 268 aa6.24□□□□□ -1.41
NUP49YGL172W ANS1P38832 159 aa6.24□□□□□ -1.41
NUP49YGL172W VHR1P40522 640 aa6.24□□□□□ -1.41
NUP49YGL172W BIT61P47041 543 aa6.24□□□□□ -1.41
NUP49YGL172W YJR120WP47157 116 aa6.24□□□□□ -1.41
NUP49YGL172W SYF2P53277 215 aaPredicted RBP6.24□□□□□ -1.41
NUP49YGL172W RRN5Q02983 363 aa6.24□□□□□ -1.41
NUP49YGL172W CTL1Q03220 320 aaKnown RBP6.24□□□□□ -1.41
NUP49YGL172W NDL1Q06568 189 aa6.24□□□□□ -1.41
NUP49YGL172W PUS7Q08647 676 aaKnown RBP6.24□□□□□ -1.41
NUP49YGL172W YOR389WQ08912 624 aa6.24□□□□□ -1.41
NUP49YGL172W YPL278CQ08990 100 aa6.24□□□□□ -1.41
NUP49YGL172W HSP42Q12329 375 aa6.24□□□□□ -1.41
NUP49YGL172W PRP46Q12417 451 aaPredicted RBP6.24□□□□□ -1.41
NUP49YGL172W YOL159C-AQ3E769 90 aa6.24□□□□□ -1.41
NUP49YGL172W FAS1P07149 2051 aaKnown RBP6.23□□□□□ -1.41
NUP49YGL172W GPH1P06738 902 aaKnown RBP6.23□□□□□ -1.41
NUP49YGL172W PET9P18239 318 aaKnown RBP6.23□□□□□ -1.41
NUP49YGL172W CLB4P24871 460 aa6.23□□□□□ -1.41
NUP49YGL172W RPN2P32565 945 aaKnown RBP6.23□□□□□ -1.41
NUP49YGL172W LOT5P34234 306 aa6.23□□□□□ -1.41
NUP49YGL172W YBR139WP38109 508 aa6.23□□□□□ -1.41
NUP49YGL172W SLM4P38247 162 aa6.23□□□□□ -1.41
NUP49YGL172W EXO84P38261 753 aa6.23□□□□□ -1.41
NUP49YGL172W ECM34P38728 170 aa6.23□□□□□ -1.41
NUP49YGL172W CIN1P40987 1014 aa6.23□□□□□ -1.41
NUP49YGL172W AGP3P43548 558 aa6.23□□□□□ -1.41
NUP49YGL172W MDV1P47025 714 aa6.23□□□□□ -1.41
NUP49YGL172W OCA1P50946 238 aaPredicted RBP6.23□□□□□ -1.41
NUP49YGL172W DCP2P53550 970 aaKnown RBP6.23□□□□□ -1.41
NUP49YGL172W MPA43P53583 542 aaPredicted RBP6.23□□□□□ -1.41
NUP49YGL172W TPS1Q00764 495 aaKnown RBP6.23□□□□□ -1.41
NUP49YGL172W SWP1Q02795 286 aa6.23□□□□□ -1.41
NUP49YGL172W NUP53Q03790 475 aa6.23□□□□□ -1.41
NUP49YGL172W ARO10Q06408 635 aa6.23□□□□□ -1.41
NUP49YGL172W DTD1Q07648 150 aaKnown RBP6.23□□□□□ -1.41
NUP49YGL172W YOR342CQ12182 319 aa6.23□□□□□ -1.41
NUP49YGL172W NKP1Q12493 238 aa6.23□□□□□ -1.41
NUP49YGL172W CDC4P07834 779 aa6.22□□□□□ -1.41
NUP49YGL172W SUI3P09064 285 aaKnown RBP6.22□□□□□ -1.41
NUP49YGL172W BAR1P12630 587 aa6.22□□□□□ -1.41
NUP49YGL172W CPR3P25719 182 aa6.22□□□□□ -1.41
NUP49YGL172W NAM9P27929 486 aa6.22□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 65.2 ms