RNA–Protein interactions for RNA: YFL005W

SEC4, Transcript of Rab family GTPase, yeastyeast

Gene SEC4, Length 648 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum, Nucleus, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC4YFL005W STE3P06783 470 aa2.85□□□□□ -1.95
SEC4YFL005W LCP5P40079 357 aaPredicted RBP2.85□□□□□ -1.95
SEC4YFL005W NAS2P40555 220 aa2.85□□□□□ -1.95
SEC4YFL005W YFR057WP43625 151 aa2.85□□□□□ -1.95
SEC4YFL005W ABM1P47146 123 aa2.85□□□□□ -1.95
SEC4YFL005W CLD1P53264 445 aa2.85□□□□□ -1.95
SEC4YFL005W PDR16P53860 351 aaKnown RBP2.85□□□□□ -1.95
SEC4YFL005W PAL1Q05518 499 aaKnown RBP2.85□□□□□ -1.95
SEC4YFL005W YPR091CQ06833 770 aa2.85□□□□□ -1.95
SEC4YFL005W YDL114WQ07530 308 aa2.85□□□□□ -1.95
SEC4YFL005W CMS1Q07897 291 aaKnown RBP2.85□□□□□ -1.95
SEC4YFL005W PML1Q07930 204 aaPredicted RBP2.85□□□□□ -1.95
SEC4YFL005W FCY22Q12119 530 aa2.85□□□□□ -1.95
SEC4YFL005W IZH2Q12442 317 aa2.85□□□□□ -1.95
SEC4YFL005W YOR338WQ99326 363 aa2.85□□□□□ -1.95
SEC4YFL005W DBR1P24309 405 aaKnown RBP2.84□□□□□ -1.95
SEC4YFL005W RVS161P25343 265 aaKnown RBP2.84□□□□□ -1.95
SEC4YFL005W PRR1P28708 518 aa2.84□□□□□ -1.95
SEC4YFL005W YEL045CP32616 141 aa2.84□□□□□ -1.95
SEC4YFL005W YIL089WP40500 205 aa2.84□□□□□ -1.95
SEC4YFL005W SEC27P41811 889 aaKnown RBP2.84□□□□□ -1.95
SEC4YFL005W SDT1P53078 280 aa2.84□□□□□ -1.95
SEC4YFL005W PRM1P53835 661 aa2.84□□□□□ -1.95
SEC4YFL005W RRB1Q04225 511 aaKnown RBP2.84□□□□□ -1.95
SEC4YFL005W YMR310CQ04867 317 aaPredicted RBP2.84□□□□□ -1.95
SEC4YFL005W WTM1Q12363 437 aaKnown RBP2.84□□□□□ -1.95
SEC4YFL005W PCL9Q12477 304 aa2.84□□□□□ -1.95
SEC4YFL005W FSH3Q99369 266 aa2.84□□□□□ -1.95
SEC4YFL005W MAS1P10507 462 aa2.83□□□□□ -1.96
SEC4YFL005W SAG1P20840 650 aa2.83□□□□□ -1.96
SEC4YFL005W TRX1P22217 103 aaKnown RBP2.83□□□□□ -1.96
SEC4YFL005W HMX1P32339 317 aa2.83□□□□□ -1.96
SEC4YFL005W VAM7P32912 316 aa2.83□□□□□ -1.96
SEC4YFL005W YOX1P34161 385 aa2.83□□□□□ -1.96
SEC4YFL005W MRPL10P36520 322 aa2.83□□□□□ -1.96
SEC4YFL005W ECM8P38246 354 aa2.83□□□□□ -1.96
SEC4YFL005W AIM10P39965 576 aaKnown RBP2.83□□□□□ -1.96
SEC4YFL005W SEC9P40357 651 aa2.83□□□□□ -1.96
SEC4YFL005W BIR1P47134 954 aa2.83□□□□□ -1.96
SEC4YFL005W BNS1P50084 137 aa2.83□□□□□ -1.96
SEC4YFL005W YMR027WQ04371 470 aa2.83□□□□□ -1.96
SEC4YFL005W AIM33Q04516 312 aa2.83□□□□□ -1.96
SEC4YFL005W SHS1Q07657 551 aa2.83□□□□□ -1.96
SEC4YFL005W GRR1P24814 1151 aa2.82□□□□□ -1.96
SEC4YFL005W FUN26P31381 517 aa2.82□□□□□ -1.96
SEC4YFL005W SPO23P33757 523 aa2.82□□□□□ -1.96
SEC4YFL005W PTK1P36002 662 aaPredicted RBP2.82□□□□□ -1.96
SEC4YFL005W ANR2P36090 516 aaPredicted RBP2.82□□□□□ -1.96
SEC4YFL005W YHR122WP38829 231 aa2.82□□□□□ -1.96
SEC4YFL005W PTI1P39927 425 aaPredicted RBP2.82□□□□□ -1.96
SEC4YFL005W YNL208WP40159 199 aaKnown RBP2.82□□□□□ -1.96
SEC4YFL005W CRH1P53301 507 aa2.82□□□□□ -1.96
SEC4YFL005W GAT3Q07928 141 aa2.82□□□□□ -1.96
SEC4YFL005W RBD2Q12270 262 aa2.82□□□□□ -1.96
SEC4YFL005W GLE1Q12315 538 aa2.82□□□□□ -1.96
SEC4YFL005W YOR012WQ12351 137 aa2.82□□□□□ -1.96
SEC4YFL005W AIM45Q12480 344 aaKnown RBP2.82□□□□□ -1.96
SEC4YFL005W RPS16AP0CX51 143 aaKnown RBP2.81□□□□□ -1.96
SEC4YFL005W RPS16BP0CX52 143 aaKnown RBP2.81□□□□□ -1.96
SEC4YFL005W AAT2P23542 418 aaKnown RBP2.81□□□□□ -1.96
SEC4YFL005W SSE1P32589 693 aaKnown RBP2.81□□□□□ -1.96
SEC4YFL005W RTC2P38279 296 aa2.81□□□□□ -1.96
SEC4YFL005W PRE5P40302 234 aaKnown RBP2.81□□□□□ -1.96
SEC4YFL005W UTP18P40362 594 aaPredicted RBP2.81□□□□□ -1.96
SEC4YFL005W GAB1P41733 394 aa2.81□□□□□ -1.96
SEC4YFL005W EGT2P42835 1041 aa2.81□□□□□ -1.96
SEC4YFL005W ATG18P43601 500 aa2.81□□□□□ -1.96
SEC4YFL005W AIP1P46680 615 aaKnown RBP2.81□□□□□ -1.96
SEC4YFL005W SHE4P51534 789 aa2.81□□□□□ -1.96
SEC4YFL005W HST1P53685 503 aa2.81□□□□□ -1.96
SEC4YFL005W MGR3Q04472 501 aa2.81□□□□□ -1.96
SEC4YFL005W YDL199CQ12407 687 aa2.81□□□□□ -1.96
SEC4YFL005W NAG1Q8TGN9 163 aa2.81□□□□□ -1.96
SEC4YFL005W RPS18AP0CX55 146 aaKnown RBP2.8□□□□□ -1.96
SEC4YFL005W RPS18BP0CX56 146 aaPredicted RBP2.8□□□□□ -1.96
SEC4YFL005W REV1P12689 985 aa2.8□□□□□ -1.96
SEC4YFL005W CKI1P20485 582 aa2.8□□□□□ -1.96
SEC4YFL005W HXT1P32465 570 aa2.8□□□□□ -1.96
SEC4YFL005W NUP2P32499 720 aa2.8□□□□□ -1.96
SEC4YFL005W YHR182WP38870 785 aa2.8□□□□□ -1.96
SEC4YFL005W MIG3P39943 394 aa2.8□□□□□ -1.96
SEC4YFL005W OXA1P39952 402 aa2.8□□□□□ -1.96
SEC4YFL005W YHC3P47040 408 aa2.8□□□□□ -1.96
SEC4YFL005W SHY1P53266 389 aa2.8□□□□□ -1.96
SEC4YFL005W YMR010WQ03687 405 aa2.8□□□□□ -1.96
SEC4YFL005W YLH47Q06493 454 aa2.8□□□□□ -1.96
SEC4YFL005W ARR1Q06596 294 aa2.8□□□□□ -1.96
SEC4YFL005W MFG1Q07684 458 aa2.8□□□□□ -1.96
SEC4YFL005W YOL075CQ08234 1294 aa2.8□□□□□ -1.96
SEC4YFL005W HXT2P23585 541 aa2.79□□□□□ -1.96
SEC4YFL005W LDB16P25587 256 aa2.79□□□□□ -1.96
SEC4YFL005W LSM12P38828 187 aaKnown RBP2.79□□□□□ -1.96
SEC4YFL005W POP2P39008 433 aa2.79□□□□□ -1.96
SEC4YFL005W YMR134WP40207 237 aa2.79□□□□□ -1.96
SEC4YFL005W CIN2P46670 268 aa2.79□□□□□ -1.96
SEC4YFL005W TRF5P48561 642 aaKnown RBP2.79□□□□□ -1.96
SEC4YFL005W SHE10P53075 577 aa2.79□□□□□ -1.96
SEC4YFL005W REX2P54964 269 aaKnown RBP2.79□□□□□ -1.96
SEC4YFL005W SMP3Q04174 516 aa2.79□□□□□ -1.96
SEC4YFL005W YET2Q04210 160 aa2.79□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms