RNA–Protein interactions for RNA: YFL002W-B

YFL002W-B, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YFL002W-B, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YFL002W-BYFL002W-B YGL262WP53054 175 aa2.47□□□□□ -2.01
YFL002W-BYFL002W-B ALF1P53904 254 aa2.47□□□□□ -2.01
YFL002W-BYFL002W-B YDR541CQ03049 344 aa2.47□□□□□ -2.01
YFL002W-BYFL002W-B NDL1Q06568 189 aa2.47□□□□□ -2.01
YFL002W-BYFL002W-B ERP4Q12450 207 aa2.47□□□□□ -2.01
YFL002W-BYFL002W-B RNA1P11745 407 aaKnown RBP2.46□□□□□ -2.02
YFL002W-BYFL002W-B MID2P36027 376 aa2.46□□□□□ -2.02
YFL002W-BYFL002W-B GPI18P38211 433 aa2.46□□□□□ -2.02
YFL002W-BYFL002W-B RTT102P53330 157 aa2.46□□□□□ -2.02
YFL002W-BYFL002W-B REX2P54964 269 aaKnown RBP2.46□□□□□ -2.02
YFL002W-BYFL002W-B RNY1Q02933 434 aaKnown RBP2.46□□□□□ -2.02
YFL002W-BYFL002W-B ENT5Q03769 411 aaKnown RBP2.46□□□□□ -2.02
YFL002W-BYFL002W-B NOP6Q07623 225 aaKnown RBP2.46□□□□□ -2.02
YFL002W-BYFL002W-B PCL9Q12477 304 aa2.46□□□□□ -2.02
YFL002W-BYFL002W-B HTZ1Q12692 134 aaKnown RBP2.46□□□□□ -2.02
YFL002W-BYFL002W-B RPS14AP06367 137 aaKnown RBP2.45□□□□□ -2.02
YFL002W-BYFL002W-B PDC2P32896 925 aa2.45□□□□□ -2.02
YFL002W-BYFL002W-B LRP1P38801 184 aaKnown RBP2.45□□□□□ -2.02
YFL002W-BYFL002W-B RPS14BP39516 138 aaKnown RBP2.45□□□□□ -2.02
YFL002W-BYFL002W-B SEC27P41811 889 aaKnown RBP2.45□□□□□ -2.02
YFL002W-BYFL002W-B CIN2P46670 268 aa2.45□□□□□ -2.02
YFL002W-BYFL002W-B MKC7P53379 596 aa2.45□□□□□ -2.02
YFL002W-BYFL002W-B ERO1Q03103 563 aa2.45□□□□□ -2.02
YFL002W-BYFL002W-B PRP3Q03338 469 aaPredicted RBP2.45□□□□□ -2.02
YFL002W-BYFL002W-B YDL114WQ07530 308 aa2.45□□□□□ -2.02
YFL002W-BYFL002W-B KAP104P38217 918 aaKnown RBP2.44□□□□□ -2.02
YFL002W-BYFL002W-B VHS1Q03785 461 aa2.44□□□□□ -2.02
YFL002W-BYFL002W-B YDR115WQ04598 105 aa2.44□□□□□ -2.02
YFL002W-BYFL002W-B YPQ1Q12010 308 aa2.44□□□□□ -2.02
YFL002W-BYFL002W-B YBL111CQ3E7Y5 667 aa2.44□□□□□ -2.02
YFL002W-BYFL002W-B ANP1P32629 500 aa2.43□□□□□ -2.02
YFL002W-BYFL002W-B SLX1P38324 304 aa2.43□□□□□ -2.02
YFL002W-BYFL002W-B TRF5P48561 642 aaKnown RBP2.43□□□□□ -2.02
YFL002W-BYFL002W-B SEH1P53011 349 aaKnown RBP2.43□□□□□ -2.02
YFL002W-BYFL002W-B IPK1Q06667 281 aa2.43□□□□□ -2.02
YFL002W-BYFL002W-B MDL1P33310 695 aa2.42□□□□□ -2.02
YFL002W-BYFL002W-B GDI1P39958 451 aaKnown RBP2.42□□□□□ -2.02
YFL002W-BYFL002W-B ASN2P49090 572 aaKnown RBP2.42□□□□□ -2.02
YFL002W-BYFL002W-B VAC7P53950 1165 aa2.42□□□□□ -2.02
YFL002W-BYFL002W-B PRP38Q00723 242 aaPredicted RBP2.42□□□□□ -2.02
YFL002W-BYFL002W-B MSC3Q05812 728 aa2.42□□□□□ -2.02
YFL002W-BYFL002W-B YLR177WQ06251 628 aa2.42□□□□□ -2.02
YFL002W-BYFL002W-B AAD15Q08361 143 aa2.42□□□□□ -2.02
YFL002W-BYFL002W-B FOL3Q12676 427 aaPredicted RBP2.42□□□□□ -2.02
YFL002W-BYFL002W-B CBP6P07253 162 aaPredicted RBP2.42□□□□□ -2.02
YFL002W-BYFL002W-B RPS18AP0CX55 146 aaKnown RBP2.42□□□□□ -2.02
YFL002W-BYFL002W-B RPS18BP0CX56 146 aaPredicted RBP2.42□□□□□ -2.02
YFL002W-BYFL002W-B GIT1P25346 518 aa2.42□□□□□ -2.02
YFL002W-BYFL002W-B MSP1P28737 362 aa2.42□□□□□ -2.02
YFL002W-BYFL002W-B MRPS9P38120 278 aa2.42□□□□□ -2.02
YFL002W-BYFL002W-B TPS1Q00764 495 aaKnown RBP2.42□□□□□ -2.02
YFL002W-BYFL002W-B YLH47Q06493 454 aa2.42□□□□□ -2.02
YFL002W-BYFL002W-B TIR4Q12218 487 aaPredicted RBP2.42□□□□□ -2.02
YFL002W-BYFL002W-B YOR012WQ12351 137 aa2.42□□□□□ -2.02
YFL002W-BYFL002W-B DPH2P32461 534 aa2.41□□□□□ -2.02
YFL002W-BYFL002W-B SOL2P37262 315 aa2.41□□□□□ -2.02
YFL002W-BYFL002W-B EPL1P43572 832 aa2.41□□□□□ -2.02
YFL002W-BYFL002W-B MCH1Q07376 486 aa2.41□□□□□ -2.02
YFL002W-BYFL002W-B MEX67Q99257 599 aaKnown RBP2.41□□□□□ -2.02
YFL002W-BYFL002W-B DET1Q99288 334 aaKnown RBP2.41□□□□□ -2.02
YFL002W-BYFL002W-B YOR338WQ99326 363 aa2.41□□□□□ -2.02
YFL002W-BYFL002W-B SCH9P11792 824 aaKnown RBP2.4□□□□□ -2.03
YFL002W-BYFL002W-B PUT4P15380 627 aa2.4□□□□□ -2.03
YFL002W-BYFL002W-B DBR1P24309 405 aaKnown RBP2.4□□□□□ -2.03
YFL002W-BYFL002W-B PMT2P31382 759 aa2.4□□□□□ -2.03
YFL002W-BYFL002W-B DEP1P31385 405 aa2.4□□□□□ -2.03
YFL002W-BYFL002W-B TOA1P32773 286 aa2.4□□□□□ -2.03
YFL002W-BYFL002W-B ECT1P33412 323 aa2.4□□□□□ -2.03
YFL002W-BYFL002W-B PTK1P36002 662 aaPredicted RBP2.4□□□□□ -2.03
YFL002W-BYFL002W-B SEC28P40509 296 aaKnown RBP2.4□□□□□ -2.03
YFL002W-BYFL002W-B ATP22P50273 684 aaPredicted RBP2.4□□□□□ -2.03
YFL002W-BYFL002W-B KTR6P54070 446 aa2.4□□□□□ -2.03
YFL002W-BYFL002W-B RPL21AQ02753 160 aaKnown RBP2.4□□□□□ -2.03
YFL002W-BYFL002W-B YPR078CQ06813 372 aa2.4□□□□□ -2.03
YFL002W-BYFL002W-B ATP16Q12165 160 aa2.4□□□□□ -2.03
YFL002W-BYFL002W-B RPL21BQ12672 160 aaKnown RBP2.4□□□□□ -2.03
YFL002W-BYFL002W-B DAP2P18962 818 aa2.39□□□□□ -2.03
YFL002W-BYFL002W-B PSO2P30620 661 aa2.39□□□□□ -2.03
YFL002W-BYFL002W-B YBR241CP38142 488 aa2.39□□□□□ -2.03
YFL002W-BYFL002W-B YSW1P38280 609 aa2.39□□□□□ -2.03
YFL002W-BYFL002W-B FHL1P39521 936 aa2.39□□□□□ -2.03
YFL002W-BYFL002W-B YER184CP39961 794 aa2.39□□□□□ -2.03
YFL002W-BYFL002W-B BIO3P50277 480 aa2.39□□□□□ -2.03
YFL002W-BYFL002W-B CDH1P53197 566 aa2.39□□□□□ -2.03
YFL002W-BYFL002W-B ECM11Q04110 302 aa2.39□□□□□ -2.03
YFL002W-BYFL002W-B SXM1Q04175 944 aaKnown RBP2.39□□□□□ -2.03
YFL002W-BYFL002W-B AIM33Q04516 312 aa2.39□□□□□ -2.03
YFL002W-BYFL002W-B IES4Q08561 116 aa2.39□□□□□ -2.03
YFL002W-BYFL002W-B YDL109CQ12103 647 aa2.39□□□□□ -2.03
YFL002W-BYFL002W-B RPL23AP0CX41 137 aaKnown RBP2.38□□□□□ -2.03
YFL002W-BYFL002W-B RPL23BP0CX42 137 aaKnown RBP2.38□□□□□ -2.03
YFL002W-BYFL002W-B MAS2P11914 482 aa2.38□□□□□ -2.03
YFL002W-BYFL002W-B RPL16AP26784 199 aaKnown RBP2.38□□□□□ -2.03
YFL002W-BYFL002W-B ZUO1P32527 433 aaKnown RBP2.38□□□□□ -2.03
YFL002W-BYFL002W-B SMP1P38128 452 aa2.38□□□□□ -2.03
YFL002W-BYFL002W-B VEL1P53058 206 aa2.38□□□□□ -2.03
YFL002W-BYFL002W-B FLC3P53121 802 aa2.38□□□□□ -2.03
YFL002W-BYFL002W-B MLC1P53141 149 aa2.38□□□□□ -2.03
YFL002W-BYFL002W-B FSH2Q05015 223 aa2.38□□□□□ -2.03
YFL002W-BYFL002W-B PIN3Q06449 215 aa2.38□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 25.5 ms