RNA–Protein interactions for RNA: YFL001W

DEG1, Transcript of tRNA:pseudouridine synthase, yeastyeast

Gene DEG1, Length 1,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DEG1YFL001W YPL068CQ02749 293 aa4.38□□□□□ -1.71
DEG1YFL001W AIM33Q04516 312 aa4.38□□□□□ -1.71
DEG1YFL001W FMP42Q04991 504 aa4.38□□□□□ -1.71
DEG1YFL001W YPL199CQ08954 240 aa4.38□□□□□ -1.71
DEG1YFL001W NCA2Q12374 616 aa4.38□□□□□ -1.71
DEG1YFL001W TPK3P05986 398 aa4.37□□□□□ -1.71
DEG1YFL001W GAL7P08431 366 aa4.37□□□□□ -1.71
DEG1YFL001W RPS16AP0CX51 143 aaKnown RBP4.37□□□□□ -1.71
DEG1YFL001W RPS16BP0CX52 143 aaKnown RBP4.37□□□□□ -1.71
DEG1YFL001W ATR1P13090 542 aa4.37□□□□□ -1.71
DEG1YFL001W SAM2P19358 384 aaKnown RBP4.37□□□□□ -1.71
DEG1YFL001W PMU1P36069 295 aa4.37□□□□□ -1.71
DEG1YFL001W CAB3P36076 571 aa4.37□□□□□ -1.71
DEG1YFL001W YHR131CP38835 850 aa4.37□□□□□ -1.71
DEG1YFL001W END3P39013 349 aa4.37□□□□□ -1.71
DEG1YFL001W PRP39P39682 629 aaKnown RBP4.37□□□□□ -1.71
DEG1YFL001W LYS12P40495 371 aaKnown RBP4.37□□□□□ -1.71
DEG1YFL001W AIP1P46680 615 aaKnown RBP4.37□□□□□ -1.71
DEG1YFL001W SFH5P47008 294 aa4.37□□□□□ -1.71
DEG1YFL001W RTT101P47050 842 aa4.37□□□□□ -1.71
DEG1YFL001W YGR117CP53270 476 aa4.37□□□□□ -1.71
DEG1YFL001W SCW4P53334 386 aaKnown RBP4.37□□□□□ -1.71
DEG1YFL001W RRN9P53437 365 aa4.37□□□□□ -1.71
DEG1YFL001W PIR3Q03180 325 aa4.37□□□□□ -1.71
DEG1YFL001W YMR111CQ04461 462 aaPredicted RBP4.37□□□□□ -1.71
DEG1YFL001W ECM18Q04623 453 aa4.37□□□□□ -1.71
DEG1YFL001W ARR1Q06596 294 aa4.37□□□□□ -1.71
DEG1YFL001W CDC23P16522 626 aa4.36□□□□□ -1.71
DEG1YFL001W YCR043CP25361 127 aa4.36□□□□□ -1.71
DEG1YFL001W PUT3P25502 979 aaPredicted RBP4.36□□□□□ -1.71
DEG1YFL001W SWC5P38326 303 aa4.36□□□□□ -1.71
DEG1YFL001W MTC4P38335 694 aaKnown RBP4.36□□□□□ -1.71
DEG1YFL001W YHR218WP38899 603 aa4.36□□□□□ -1.71
DEG1YFL001W FAA2P39518 744 aa4.36□□□□□ -1.71
DEG1YFL001W YND1P40009 630 aa4.36□□□□□ -1.71
DEG1YFL001W YHC3P47040 408 aa4.36□□□□□ -1.71
DEG1YFL001W YDL186WP48568 277 aa4.36□□□□□ -1.71
DEG1YFL001W AZR1P50080 613 aa4.36□□□□□ -1.71
DEG1YFL001W YMR181CQ03231 154 aa4.36□□□□□ -1.71
DEG1YFL001W ERP1Q05359 219 aaKnown RBP4.36□□□□□ -1.71
DEG1YFL001W YLR413WQ06689 675 aa4.36□□□□□ -1.71
DEG1YFL001W GLE1Q12315 538 aa4.36□□□□□ -1.71
DEG1YFL001W YDR262WQ12331 272 aa4.36□□□□□ -1.71
DEG1YFL001W YOP1Q12402 180 aa4.36□□□□□ -1.71
DEG1YFL001W SPO24Q3E752 67 aa4.36□□□□□ -1.71
DEG1YFL001W PAB1P04147 577 aaKnown RBP RIP-Chip data4.35□□□□□ -1.71not detected
DEG1YFL001W CLN3P13365 580 aa4.35□□□□□ -1.71
DEG1YFL001W RNA14P25298 677 aaKnown RBP4.35□□□□□ -1.71
DEG1YFL001W YEF1P32622 495 aa4.35□□□□□ -1.71
DEG1YFL001W VAM7P32912 316 aa4.35□□□□□ -1.71
DEG1YFL001W MET30P39014 640 aa4.35□□□□□ -1.71
DEG1YFL001W YMR134WP40207 237 aa4.35□□□□□ -1.71
DEG1YFL001W YIL169CP40442 995 aa4.35□□□□□ -1.71
DEG1YFL001W TES1P41903 349 aaKnown RBP4.35□□□□□ -1.71
DEG1YFL001W CAF40P53829 373 aa4.35□□□□□ -1.71
DEG1YFL001W CAB5Q03941 241 aa4.35□□□□□ -1.71
DEG1YFL001W BCH1Q05029 724 aa4.35□□□□□ -1.71
DEG1YFL001W RRP12Q12754 1228 aaKnown RBP4.35□□□□□ -1.71
DEG1YFL001W SUP35P05453 685 aaKnown RBP4.34□□□□□ -1.71
DEG1YFL001W RPL15AP05748 204 aaKnown RBP4.34□□□□□ -1.71
DEG1YFL001W RPL20AP0CX23 172 aaKnown RBP4.34□□□□□ -1.71
DEG1YFL001W RPL20BP0CX24 172 aaPredicted RBP4.34□□□□□ -1.71
DEG1YFL001W MSS116P15424 664 aaKnown RBP4.34□□□□□ -1.71
DEG1YFL001W CKI1P20485 582 aa4.34□□□□□ -1.71
DEG1YFL001W SLY1P22213 666 aa4.34□□□□□ -1.71
DEG1YFL001W MRPL8P22353 238 aa4.34□□□□□ -1.71
DEG1YFL001W YCL068CP25593 260 aa4.34□□□□□ -1.71
DEG1YFL001W SEC1P30619 724 aaKnown RBP4.34□□□□□ -1.71
DEG1YFL001W BZZ1P38822 633 aa4.34□□□□□ -1.71
DEG1YFL001W RIB4P50861 169 aaPredicted RBP4.34□□□□□ -1.71
DEG1YFL001W DBP6P53734 629 aaKnown RBP4.34□□□□□ -1.71
DEG1YFL001W SPR6Q01684 191 aa4.34□□□□□ -1.71
DEG1YFL001W SNA4Q07549 140 aa4.34□□□□□ -1.71
DEG1YFL001W RAX1Q08760 435 aa4.34□□□□□ -1.71
DEG1YFL001W AYT1Q12226 474 aa4.34□□□□□ -1.71
DEG1YFL001W POM152P39685 1337 aa4.33□□□□□ -1.72
DEG1YFL001W YLL053CP0CD98 152 aa4.33□□□□□ -1.72
DEG1YFL001W EXG1P23776 448 aaKnown RBP4.33□□□□□ -1.72
DEG1YFL001W MCR1P36060 302 aaKnown RBP4.33□□□□□ -1.72
DEG1YFL001W RIB5P38145 238 aa4.33□□□□□ -1.72
DEG1YFL001W MIX23P38162 196 aa4.33□□□□□ -1.72
DEG1YFL001W YBR137WP38276 179 aa4.33□□□□□ -1.72
DEG1YFL001W RTC2P38279 296 aa4.33□□□□□ -1.72
DEG1YFL001W RPR2P40571 144 aa4.33□□□□□ -1.72
DEG1YFL001W GCD14P46959 383 aaPredicted RBP4.33□□□□□ -1.72
DEG1YFL001W SPO19Q03029 223 aa4.33□□□□□ -1.72
DEG1YFL001W CCE1Q03702 353 aa4.33□□□□□ -1.72
DEG1YFL001W SMP3Q04174 516 aa4.33□□□□□ -1.72
DEG1YFL001W RRG8Q06109 277 aa4.33□□□□□ -1.72
DEG1YFL001W SRL1Q08673 210 aa4.33□□□□□ -1.72
DEG1YFL001W MRPL23Q12487 163 aaPredicted RBP4.33□□□□□ -1.72
DEG1YFL001W RAD9P14737 1309 aa4.32□□□□□ -1.72
DEG1YFL001W SSC1P0CS90 654 aaKnown RBP4.32□□□□□ -1.72
DEG1YFL001W CAP2P13517 287 aa4.32□□□□□ -1.72
DEG1YFL001W ATS1P31386 333 aa4.32□□□□□ -1.72
DEG1YFL001W YPS1P32329 569 aa4.32□□□□□ -1.72
DEG1YFL001W CHK1P38147 527 aa4.32□□□□□ -1.72
DEG1YFL001W CDC40P40968 455 aaPredicted RBP4.32□□□□□ -1.72
DEG1YFL001W PNC1P53184 216 aaKnown RBP4.32□□□□□ -1.72
DEG1YFL001W IBD2P53892 351 aa4.32□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms