RNA–Protein interactions for RNA: YDR351W

SBE2, Transcript of Protein required for bud growth, yeast

Gene SBE2, Length 2,595 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SBE2	YDR351W	RPS1A	P33442	255 aa	Known RBP	4.23	□□□□□ -1.73
SBE2	YDR351W	VBA2	P38358	474 aa	Known RBP	4.23	□□□□□ -1.73
SBE2	YDR351W	SPC97	P38863	823 aa		4.23	□□□□□ -1.73
SBE2	YDR351W	HAT2	P39984	401 aa		4.23	□□□□□ -1.73
SBE2	YDR351W	YMR134W	P40207	237 aa		4.23	□□□□□ -1.73
SBE2	YDR351W	YFL054C	P43549	646 aa		4.23	□□□□□ -1.73
SBE2	YDR351W	NAS6	P50086	228 aa		4.23	□□□□□ -1.73
SBE2	YDR351W	MTL1	P53214	551 aa		4.23	□□□□□ -1.73
SBE2	YDR351W	DYN2	Q02647	92 aa		4.23	□□□□□ -1.73
SBE2	YDR351W	POS5	Q06892	414 aa		4.23	□□□□□ -1.73
SBE2	YDR351W	RRP42	Q12277	265 aa	Predicted RBP	4.23	□□□□□ -1.73
SBE2	YDR351W	BBP1	Q12365	385 aa		4.23	□□□□□ -1.73
SBE2	YDR351W	AIM45	Q12480	344 aa	Known RBP	4.23	□□□□□ -1.73
SBE2	YDR351W	TUB1	P09733	447 aa	Known RBP	4.22	□□□□□ -1.73
SBE2	YDR351W	RPS4A	P0CX35	261 aa	Known RBP	4.22	□□□□□ -1.73
SBE2	YDR351W	RPS4B	P0CX36	261 aa	Known RBP	4.22	□□□□□ -1.73
SBE2	YDR351W	PCT1	P13259	424 aa		4.22	□□□□□ -1.73
SBE2	YDR351W	SNF5	P18480	905 aa		4.22	□□□□□ -1.73
SBE2	YDR351W	PDE1	P22434	369 aa		4.22	□□□□□ -1.73
SBE2	YDR351W	APL1	P27351	700 aa		4.22	□□□□□ -1.73
SBE2	YDR351W	TRR1	P29509	319 aa	Known RBP	4.22	□□□□□ -1.73
SBE2	YDR351W	ITR2	P30606	609 aa		4.22	□□□□□ -1.73
SBE2	YDR351W	MRPL7	P36519	292 aa		4.22	□□□□□ -1.73
SBE2	YDR351W	YBP1	P38315	674 aa		4.22	□□□□□ -1.73
SBE2	YDR351W	UBA4	P38820	440 aa		4.22	□□□□□ -1.73
SBE2	YDR351W	LCP5	P40079	357 aa	Predicted RBP	4.22	□□□□□ -1.73
SBE2	YDR351W	PRK1	P40494	810 aa		4.22	□□□□□ -1.73
SBE2	YDR351W	UBX6	P47049	396 aa		4.22	□□□□□ -1.73
SBE2	YDR351W	NIF3	P53081	288 aa		4.22	□□□□□ -1.73
SBE2	YDR351W	MCM21	Q06675	368 aa		4.22	□□□□□ -1.73
SBE2	YDR351W	ASR1	Q06834	288 aa		4.22	□□□□□ -1.73
SBE2	YDR351W	DPM1	P14020	267 aa	Known RBP	4.22	□□□□□ -1.73
SBE2	YDR351W	PUT3	P25502	979 aa	Predicted RBP	4.22	□□□□□ -1.73
SBE2	YDR351W	FUN26	P31381	517 aa		4.22	□□□□□ -1.73
SBE2	YDR351W	ELF1	P36053	145 aa		4.22	□□□□□ -1.73
SBE2	YDR351W	RMD6	P39975	231 aa		4.22	□□□□□ -1.73
SBE2	YDR351W	LAS21	P40367	830 aa		4.22	□□□□□ -1.73
SBE2	YDR351W	GDS1	P41913	522 aa		4.22	□□□□□ -1.73
SBE2	YDR351W	MSE1	P48525	536 aa		4.22	□□□□□ -1.73
SBE2	YDR351W	ORM1	P53224	222 aa		4.22	□□□□□ -1.73
SBE2	YDR351W	ZRG17	P53735	605 aa		4.22	□□□□□ -1.73
SBE2	YDR351W	NUP49	Q02199	472 aa		4.22	□□□□□ -1.73
SBE2	YDR351W	NEJ1	Q06148	342 aa		4.22	□□□□□ -1.73
SBE2	YDR351W	PUS7	Q08647	676 aa	Known RBP	4.22	□□□□□ -1.73
SBE2	YDR351W	FYV7	Q12247	151 aa		4.22	□□□□□ -1.73
SBE2	YDR351W	PRS5	Q12265	496 aa	Known RBP	4.22	□□□□□ -1.73
SBE2	YDR351W	RKM5	Q12367	367 aa		4.22	□□□□□ -1.73
SBE2	YDR351W	PET54	P10834	293 aa		4.21	□□□□□ -1.73
SBE2	YDR351W	YBL010C	P32788	280 aa		4.21	□□□□□ -1.73
SBE2	YDR351W	TRM2	P33753	639 aa		4.21	□□□□□ -1.73
SBE2	YDR351W	ANR2	P36090	516 aa	Predicted RBP	4.21	□□□□□ -1.73
SBE2	YDR351W	ARA1	P38115	344 aa		4.21	□□□□□ -1.73
SBE2	YDR351W	HIS2	P38635	335 aa		4.21	□□□□□ -1.73
SBE2	YDR351W	YHR177W	P38867	453 aa		4.21	□□□□□ -1.73
SBE2	YDR351W	BUR6	P40096	142 aa		4.21	□□□□□ -1.73
SBE2	YDR351W	COA1	P40452	197 aa		4.21	□□□□□ -1.73
SBE2	YDR351W	TAX4	P47030	604 aa		4.21	□□□□□ -1.73
SBE2	YDR351W	RNY1	Q02933	434 aa	Known RBP	4.21	□□□□□ -1.73
SBE2	YDR351W	SNO1	Q03144	224 aa		4.21	□□□□□ -1.73
SBE2	YDR351W	YPR196W	Q06595	470 aa		4.21	□□□□□ -1.73
SBE2	YDR351W	FCY22	Q12119	530 aa		4.21	□□□□□ -1.73
SBE2	YDR351W	AGC1	Q12482	902 aa		4.21	□□□□□ -1.73
SBE2	YDR351W	PRX1	P34227	261 aa	Known RBP	4.21	□□□□□ -1.74
SBE2	YDR351W	YCR087C-A	P37263	153 aa		4.21	□□□□□ -1.74
SBE2	YDR351W	RRN10	P38204	145 aa		4.21	□□□□□ -1.74
SBE2	YDR351W	ATG7	P38862	630 aa		4.21	□□□□□ -1.74
SBE2	YDR351W	COS12	P53053	380 aa		4.21	□□□□□ -1.74
SBE2	YDR351W	YGL108C	P53139	140 aa		4.21	□□□□□ -1.74
SBE2	YDR351W	JAC1	P53193	184 aa		4.21	□□□□□ -1.74
SBE2	YDR351W	TIM44	Q01852	431 aa		4.21	□□□□□ -1.74
SBE2	YDR351W	RSA3	Q05942	220 aa	Known RBP	4.21	□□□□□ -1.74
SBE2	YDR351W	RAD34	Q06665	692 aa		4.21	□□□□□ -1.74
SBE2	YDR351W	WHI4	Q07655	649 aa	Known RBP	4.21	□□□□□ -1.74
SBE2	YDR351W	YLR031W	Q07978	186 aa		4.21	□□□□□ -1.74
SBE2	YDR351W	RTR2	Q12378	196 aa		4.21	□□□□□ -1.74
SBE2	YDR351W	TY1A-DR3	Q12441	440 aa		4.21	□□□□□ -1.74
SBE2	YDR351W	POM34	Q12445	299 aa		4.21	□□□□□ -1.74
SBE2	YDR351W	YLR361C-A	Q3E795	98 aa		4.21	□□□□□ -1.74
SBE2	YDR351W	RAS1	P01119	309 aa		4.2	□□□□□ -1.74
SBE2	YDR351W	ELO2	P25358	347 aa		4.2	□□□□□ -1.74
SBE2	YDR351W	FEN2	P25621	512 aa	Known RBP	4.2	□□□□□ -1.74
SBE2	YDR351W	KAR9	P32526	644 aa		4.2	□□□□□ -1.74
SBE2	YDR351W	YBR144C	P34215	104 aa		4.2	□□□□□ -1.74
SBE2	YDR351W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
SBE2	YDR351W	TSC10	P38342	320 aa		4.2	□□□□□ -1.74
SBE2	YDR351W	BTT1	P40314	149 aa	Predicted RBP	4.2	□□□□□ -1.74
SBE2	YDR351W	YPR003C	P53394	754 aa		4.2	□□□□□ -1.74
SBE2	YDR351W	TRM82	Q03774	444 aa		4.2	□□□□□ -1.74
SBE2	YDR351W	YPR091C	Q06833	770 aa		4.2	□□□□□ -1.74
SBE2	YDR351W	PEX27	Q08580	376 aa		4.2	□□□□□ -1.74
SBE2	YDR351W	ARG82	P07250	355 aa		4.2	□□□□□ -1.74
SBE2	YDR351W	SPS4	P09937	338 aa		4.2	□□□□□ -1.74
SBE2	YDR351W	RPL31B	P0C2H9	113 aa	Known RBP	4.2	□□□□□ -1.74
SBE2	YDR351W	PYC1	P11154	1178 aa	Known RBP	4.2	□□□□□ -1.74
SBE2	YDR351W	PPZ1	P26570	692 aa		4.2	□□□□□ -1.74
SBE2	YDR351W	YSC83	P32792	385 aa		4.2	□□□□□ -1.74
SBE2	YDR351W	REC114	P32841	428 aa		4.2	□□□□□ -1.74
SBE2	YDR351W	YKL162C	P36052	402 aa		4.2	□□□□□ -1.74
SBE2	YDR351W	NTR2	P36118	322 aa	Predicted RBP	4.2	□□□□□ -1.74
SBE2	YDR351W	SHG1	P38337	142 aa		4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 42.4 ms